BAC Information

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BAC

Clone NameB6Ng01-303O10
Chromosome2 (Build37)
Map Location 77,890,090 - 78,009,316
singlet/doubletdoublet
Overlap geneLOC667920
Upstream gene2610301F02Rik, Sestd1, LOC623706, LOC667906, Zfp533, BC003993
Downstream geneOTTMUSG00000016703, LOC383717, LOC100040476, LOC100040494, 4930401B11Rik, Ube2e3, LOC100040526
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303O10.bB6Ng01-303O10.g
ACCGA097588GA097589
length1,088527
definitionB6Ng01-303O10.b B6Ng01-303O10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,890,090 - 77,891,178)(78,008,785 - 78,009,316)
sequence
gaattcagatttctaataaaattaatttgagaaaaatcaatgaccctatg
agtttaagaggactttcattattccaaggtaacagtttccaaagcttagt
atgtccttcaaaagcttattgtctaaaatgttctttctcctccttctagg
gcggatttccccttctgggtcatgactaactacattgctcatactagcca
gaattatatatccctgtacattccccacttcttttccactcagaatagtt
gataatctgcgtagttacaagaatatccacgcacagcagtggcttattca
aaaaaggtatcataccactgttgtttcttttccttggcaaaaagggaata
ttttgttcctacaattataacttctaaatattaaaaagtgagtagtgaat
tctgatagacatttcttcaaaaatctgtcaaattagaatacatcttacta
ctaaagtcattttgtgattataagcaataaacttttcttcttgctttttt
cttttctttttccttatttttctgttctttcttcttttccttcctccctt
cctcccttcctccctccctcccttcctttctctccccccaaacccccaga
cagagtttcaggacaaccaggactacacgagaaactctgtacttttactc
ttttatatacacagcctgctttctcatagaaccagcccaggatcaccagc
ccagggatggcaccacccatagtgggcttgtcccttccccagaaatcact
aaatcagaaaatgctccgtagacttgtctacagccagatactatgaaggc
atttctcaattgaggctccctcctctctgatgactctagcttgtgtcaag
ttgccacaaaacgaacctgtacgacatcagagaacaacaagagtcaacaa
tccttgtcctatagtggcaaacttgtctctaaatttgtatctccatattc
atagattaggatagctctggaacatcatcagagaattttctttgtctggt
ggggcagtagttaaaacagaaactcatactgaatgcagggaatctgtgtt
ctgcagagtgctcagccacaaatgaccatctagttttg

cagagatatttaattaaacatgtttcctggggtgttttttacattaagac
ataactacaccatttctttcccttccctttcttccctctaaccggtctca
taaccaacagcaacacccctactgcctctccaattcatgccctctatttc
ttggtgattattacatatgtgtaaatgcataaatacataaataaatctgc
tcaattcattgcagataagctgattaattacatattaaattcatccatca
aaagttctataattagtaagtacgttcaggaagtataaaggataggagat
aaatatataacaattaatggtatttttatatactaacaaacatttgagca
cacaatttacaaactctgtgagtatgtgtgtgtgtgtgtgtgtgtgtatg
agtgtgtgtgtataaacctagcagacatcaagaatttttaaatactattg
atcatgagaaaggagaacaaagcagatctaaataaataaaaagacatatc
tcggtcacctattagagcatgtgacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_77890090_77891178
seq2: B6Ng01-303O10.b_46_1133

seq1  GAATTCAGATTTCTAATAAAATTAATTTGAGAAAAATCAATGACCCTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATTTCTAATAAAATTAATTTGAGAAAAATCAATGACCCTATG  50

seq1  AGTTTAAGAGGACTTTCATTATTCCAAGGTAACAGTTTCCAAAGCTTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAAGAGGACTTTCATTATTCCAAGGTAACAGTTTCCAAAGCTTAGT  100

seq1  ATGTCCTTCAAAAGCTTATTGTCTAAAATGTTCTTTCTCCTCCTTCTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTTCAAAAGCTTATTGTCTAAAATGTTCTTTCTCCTCCTTCTAGG  150

seq1  GCGGATTTCCCCTTCTGGGTCATGACTAACTACATTGCTCATACTAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGATTTCCCCTTCTGGGTCATGACTAACTACATTGCTCATACTAGCCA  200

seq1  GAATTATATATCCCTGTACATTCCCCACTTCTTTTCCACTCAGAATAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATATATCCCTGTACATTCCCCACTTCTTTTCCACTCAGAATAGTT  250

seq1  GATAATCTGCGTAGTTACAAGAATATCCACGCACAGCAGTGGCTTATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATCTGCGTAGTTACAAGAATATCCACGCACAGCAGTGGCTTATTCA  300

seq1  AAAAAGGTATCATACCACTGTTGTTTCTTTTCCTTGGCAAAAAGGGAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGTATCATACCACTGTTGTTTCTTTTCCTTGGCAAAAAGGGAATA  350

seq1  TTTTGTTCCTACAATTATAACTTCTAAATATTAAAAAGTGAGTAGTGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTCCTACAATTATAACTTCTAAATATTAAAAAGTGAGTAGTGAAT  400

seq1  TCTGATAGACATTTCTTCAAAAATCTGTCAAATTAGAATACATCTTACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATAGACATTTCTTCAAAAATCTGTCAAATTAGAATACATCTTACTA  450

seq1  CTAAAGTCATTTTGTGATTATAAGCAATAAACTTTTCTTCTTGCTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTCATTTTGTGATTATAAGCAATAAACTTTTCTTCTTGCTTTTTT  500

seq1  CTTTTCTTTTTCCTTATTTTTCTGTTCTTTCTTCTTTTCCTTCCTCCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTTTTCCTTATTTTTCTGTTCTTTCTTCTTTTCCTTCCTCCCTT  550

seq1  CCTCCCTTCCTCCCTCCCTCCCTTCCTTTCTCTCCCCCCAAACCCCCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTTCCTCCCTCCCTCCCTTCCTTTCTCTCCCCCCAAACCCCCAGA  600

seq1  CAGAGTTTCAGGACAACCAGGACTACACGAGAAACTCTGTACTTTTACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTTCAGGACAACCAGGACTACACGAGAAACTCTGTACTTTTACTC  650

seq1  TTTTATATACACAGCCTGCTTTCTCATAGAACCAGCCCAGGATCACCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATACACAGCCTGCTTTCTCATAGAACCAGCCCAGGATCACCAGC  700

seq1  CCAGGGATGGCACCACCCATAGTGGGCTTGTCCCTTCCCCAGAAATCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGATGGCACCACCCATAGTGGGCTTGTCCCTTCCCCAGAAATCACT  750

seq1  AAATCAGAAAATGCTCCGTAGACTTGTCTACAGCCAGATACTATGAAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGAAAATGCTCCGTAGACTTGTCTACAGCCAGATACTATGAAGGC  800

seq1  ATTTCTCAATTGAGGCTCCCTCCTCTCTGATGACTCTAGCTTGTGTCAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCAATTGAGGCTCCCTCCTCTCTGATGACTCTAGCTTGTGTCAAG  850

seq1  TTGCCACAAAACGAACCTGTACGACATCAGAGAACAACAAGAGTCAACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACAAAACGAACCTGTACGACATCAGAGAACAACAAGAGTCAACAA  900

seq1  TCCTTGTCCTATAGTGGCAAACTTGTCTCTAAATTTGTATCTCCATATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTCCTATAGTGGCAAACTTGTCTCTAAATTTGTATCTCCATATTC  950

seq1  ATAGATTAGGATAGCTCTGGAACATCATCAGAGAATTTTCTTTGTCTGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTAGGATAGCTCTGGAACATCATCAGAGAATTTTCTTTGTCTGGT  1000

seq1  -GGGCAGTAGTTAAAACAGAAACTCATAACTGAATGCAGGGAATCTGTG-  1048
       |||||||||||||||||||||||||| ||||||||||||||||||||| 
seq2  GGGGCAGTAGTTAAAACAGAAACTCAT-ACTGAATGCAGGGAATCTGTGT  1049

seq1  TCTGCAGAGTGCTCAGCCACAAATGACACATCTAAGTTTTG  1089
      ||||||||||||||||||||||||||| ||||| |||||||
seq2  TCTGCAGAGTGCTCAGCCACAAATGAC-CATCT-AGTTTTG  1088


seq1: chr2_78008785_78009316
seq2: B6Ng01-303O10.g_66_597 (reverse)

seq1  TGTCACATGCTCTAATAGGTGACCGAGATATGTCTTTTTATTTATTTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACATGCTCTAATAGGTGACCGAGATATGTCTTTTTATTTATTTAGA  50

seq1  TCTCCTTTGTTCTCCTTTCTCATTATCAATAGTATTTAAAAATTCTTTAT  100
      ||| ||||||||||||||||||| ||||||||||||||||||||||| ||
seq2  TCTGCTTTGTTCTCCTTTCTCATGATCAATAGTATTTAAAAATTCTTGAT  100

seq1  GTTTGCTAGGTTTATACACACACACTCATACACACACACACACACACACA  150
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCTAGGTTTATACACACACACTCATACACACACACACACACACACA  150

seq1  CATACTCACAGAGTTTGTAAATTGTGTGCTCAAATGTTTGTTAGTATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTCACAGAGTTTGTAAATTGTGTGCTCAAATGTTTGTTAGTATATA  200

seq1  AAAATACCATTAATTGTTATATATTTATCTCCTATCCTTTATACTTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACCATTAATTGTTATATATTTATCTCCTATCCTTTATACTTCCTG  250

seq1  AACGTACTTACTAATTATAGAACTTTTGATGGATGAATTTAATATGTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTACTTACTAATTATAGAACTTTTGATGGATGAATTTAATATGTAAT  300

seq1  TAATCAGCTTATCTGCAATGAATTGAGCAGATTTATTTATGTATTTATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGCTTATCTGCAATGAATTGAGCAGATTTATTTATGTATTTATGC  350

seq1  ATTTACACATATGTAATAATCACCAAGAAATAGAGGGCATGAATTGGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACACATATGTAATAATCACCAAGAAATAGAGGGCATGAATTGGAGA  400

seq1  GGCAGTAGGGGTGTTGCTGTTGGTTATGAGACCGGTTAGAGGGAAGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTAGGGGTGTTGCTGTTGGTTATGAGACCGGTTAGAGGGAAGAAAG  450

seq1  GGAAGGGAAAGAAATGGTGTAGTTATGTCTTAATGTAAAAAACACCCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGAAAGAAATGGTGTAGTTATGTCTTAATGTAAAAAACACCCCAG  500

seq1  GAAACATGTTTAATTAAATATCTCTGGAATTC  532
      ||||||||||||||||||||||||||||||||
seq2  GAAACATGTTTAATTAAATATCTCTGGAATTC  532


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