BAC Information

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BAC

Clone NameB6Ng01-304A07
Chromosome2 (Build37)
Map Location 89,204,873 - 89,205,990
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234
Downstream geneOlfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690, LOC100043113, LOC668629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304A07.bB6Ng01-304A07.g
ACCGA097676GA097677
length1,1941,115
definitionB6Ng01-304A07.b B6Ng01-304A07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccatacctccagagaagagctaataccaatattcctcaaact
cttccattaaatagaaacagaagaaacactacctaattcattctatgaag
ccataattactttgacacctaatccatacagggacccaatgaaaaagaga
acttcagaccaatttcactgatgaatattgatgcaaatatactcaatata
attctcccaattcgattccaagaacacatcaaaatcatcacccactatga
taaagatctaactagagcagcaagacaacaaaagatgatgaaggggatac
aaattgtcaaagaagaagccaaagtatcactatttacacatgatattata
atatacaaaaggcaccccaaaaattttaccagagaacttcaatagctgat
gaccaacttcagcaatttggctggatttaaaattaactcaaagtagtagc
cttcctttatacaaatgataaacgggttgaaaaagaaattaaggaaaggc
catccttcacaatagccacaaataatataaaatatattgggtaactctga
ccaaacaagtgaatgatctgtatgacaagaatttcaagtctctcaagaaa
gaaattagagaagaccttagaaaatggaaagatctcccactctcatgaat
tggtgaggttaacacagtaaaaatgaccatcctaccaaaaatgatctata
gattcagtacaatccccatgaaattcccagcacaattcttcaaagatatg
gaaagagaaattctcaattcactggaaaaacaaaaaagctcagttagtga
cacaattcttaacaatacaagaggcacaagtcccttccgctcgactcgag
ccccgggctaccttgccagcagagtcttgcccaacacccgcaagggccca
cacgggactccccacgggatcctaagacctctggtgagtggaacacagtg
cctgccccaatccaatcgcacggaaccggagactgcggtacatagggagc
agctacccgggcttgatctggggcacagtcccttcgctccactcagcccg
ggctactgcagcggagtggctgacacccgcagggccccaccaggaattcc
acacgagatctaagacctctaatgagtgaacacaacttctgcaggatcgg
atccgaattagaattctggtaccttgcctggccggagagagctg
gaattcttgttgagaatttgtcaagaaaaagcaaattaacactcatttac
tcaaaaataagacttttataatatatttagtcaaatacgcataatactta
ataattttaaaattcgacttttttgcattcctgtggcatttacgtgtcta
caccaatgtaacttgtgtctagtaagtaataggttttagtttatatcttg
aagcaacattaattcccaaagagaatgcttcaacaaggaagatgatctta
atgatgaacctcaaaatatttcactgaattggtcgagcactccccaaagc
acttcctccaaatgaaattatccaaggatccatgccccagagaactggtg
tcttctatgtattccttccaatgcagttttatgttcagagaagtacctgg
gaataataatcagcaaaatcaagtggaataaattagaaacccaatgataa
ataacaaattatccatcaaaaccaaaaatgttaggttgtataagaaccaa
attctcaatcaacatggaattgaaaatttcaatctagaatgcactgacat
gaaaaaaaaagttcaaagcttactataggacagatatgatatatatatat
atatatatatatatatatatatatatataaacaaaccattgcatatcaac
ttactaaaagttttaatacagtttagatgagataatatgtccaatccaat
tttattgaatgtgatacaataatataaattcaaagacatttgacccttaa
tcatcacatgttatttaaatgacatgggaagctcaactcgataaatttaa
atctgttaatatatactctaaaacttataaaatacaacaaatcaagtata
caatacacattaataatttgatttagtacatcaaagacactgggttattt
ggagaattttaattcctttttatagaaatgtgtgtgggaaatattttaaa
agaaccaccaagttccatgctcatctagctattctctgcctgccaaattc
tctggcggacagagctcccgagttcctttcgtagcacacagacccacaca
tgaccatctaacccacagtcagcagccacaataccaaccagccagataga
aaccaaactctagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89204873_89205990
seq2: B6Ng01-304A07.g_68_1182

seq1  GAATTCTTGTTGAGAATTTGTCAAGAAAAAGCAAATTAACACTCATTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTGAGAATTTGTCAAGAAAAAGCAAATTAACACTCATTTAC  50

seq1  TCAAAAATAAGACTTTTATAATATATTTAGTCAAATACGCATAATACTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAATAAGACTTTTATAATATATTTAGTCAAATACGCATAATACTTA  100

seq1  ATAATTTTAAAATTCGACTTTTTTGCATTCCTGTGGCATTTACGTGTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTAAAATTCGACTTTTTTGCATTCCTGTGGCATTTACGTGTCTA  150

seq1  CACCAATGTAACTTGTGTCTAGTAAGTAATAGGTTTTAGTTTATATCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATGTAACTTGTGTCTAGTAAGTAATAGGTTTTAGTTTATATCTTG  200

seq1  AAGCAACATTAATTCCCAAAGAGAATGCTTCAACAAGGAAGATGATCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACATTAATTCCCAAAGAGAATGCTTCAACAAGGAAGATGATCTTA  250

seq1  ATGATGAACCTCAAAATATTTCACTGAATTGGTCGAGCACTCCCCAAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAACCTCAAAATATTTCACTGAATTGGTCGAGCACTCCCCAAAGC  300

seq1  ACTTCCTCCAAATGAAATTATCCAAGGATCCATGCCCCAGAGAACTGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTCCAAATGAAATTATCCAAGGATCCATGCCCCAGAGAACTGGTG  350

seq1  TCTTCTATGTATTCCTTCCAATGCAGTTTTATGTTCAGAGAAGTACCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTATGTATTCCTTCCAATGCAGTTTTATGTTCAGAGAAGTACCTGG  400

seq1  GAATAATAATCAGCAAAATCAAGTGGAATAAATTAGAAACCTAATGATAA  450
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GAATAATAATCAGCAAAATCAAGTGGAATAAATTAGAAACCCAATGATAA  450

seq1  ATAACAAATTATCCATCAAAACCAAAAATGTTAGGTTGTATAAGAACCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAAATTATCCATCAAAACCAAAAATGTTAGGTTGTATAAGAACCAA  500

seq1  ATTCTCAATCAACATGGAATTGAAAATTTCAATCTAGAATGCACTGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAATCAACATGGAATTGAAAATTTCAATCTAGAATGCACTGACAT  550

seq1  GAAAAAAAAAGTTCAAAGCTTACTATAGGACAGATATGATATATATATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAAGTTCAAAGCTTACTATAGGACAGATATGATATATATATAT  600

seq1  ATATATATATATATATATATATATATATAAACAAACCATTGCATATCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATAAACAAACCATTGCATATCAAC  650

seq1  TTACTAAAAGTTTTAATACAGTTTAGATGAGATAATATGTCCAATCCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAAAGTTTTAATACAGTTTAGATGAGATAATATGTCCAATCCAAT  700

seq1  TTTATTGAATGTGATACAATAATATAAATTCAAAGACATTTGACCCTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGAATGTGATACAATAATATAAATTCAAAGACATTTGACCCTTAA  750

seq1  TCATCACATGTTATTTAAATGACAT-GGAAGCTCAACTCGATAAATTTAA  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCATCACATGTTATTTAAATGACATGGGAAGCTCAACTCGATAAATTTAA  800

seq1  ATCTGTTAATATATACTCTAAAACTTATAAAATACAACAAATCAAGTATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTAATATATACTCTAAAACTTATAAAATACAACAAATCAAGTATA  850

seq1  CAATACACATTAATAA-TTGATTTAGTACATCAAAGACACTGGGGTTATT  898
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  CAATACACATTAATAATTTGATTTAGTACATCAAAGACACT-GGGTTATT  899

seq1  TGGAGAATTTTAATTCC-TTTTATAGAAATGTGTTGTGGGAAATA-TTTA  946
      ||||||||||||||||| ||||||||||||||| ||||||||||| ||||
seq2  TGGAGAATTTTAATTCCTTTTTATAGAAATGTG-TGTGGGAAATATTTTA  948

seq1  AAAGAACCACCAAGTTCCCATGCCTCATCTAGCTATTCTCTGCCTGCC-A  995
      |||||||||||||||| ||||| ||||||||||||||||||||||||| |
seq2  AAAGAACCACCAAGTT-CCATG-CTCATCTAGCTATTCTCTGCCTGCCAA  996

seq1  ATTCTCTGGCGGGACAGAGCTCCCGAGTTCCCTTCGTAGCCACACCAGAC  1045
      |||||||||| |||||||||||||||||||| ||||||| |||| |||||
seq2  ATTCTCTGGC-GGACAGAGCTCCCGAGTTCCTTTCGTAG-CACA-CAGAC  1043

seq1  CCACACAATGACCATCTACCCCACAGTCAGCAGCCACAATACCCAACAAC  1095
      |||||| ||||||||||| |||||||||||||||||||||| ||||| | 
seq2  CCACAC-ATGACCATCTAACCCACAGTCAGCAGCCACAATA-CCAACCAG  1091

seq1  CCAG-TAGAAACAAAACTCTAGAA  1118
      |||| ||||||| |||||||||||
seq2  CCAGATAGAAACCAAACTCTAGAA  1115