BAC Information

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BAC

Clone NameB6Ng01-304J13
Chromosome2 (Build37)
Map Location 46,091,375 - 46,092,462
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042661, LOC100041337, LOC666604
Downstream geneLOC383690
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304J13.bB6Ng01-304J13.g
ACCGA098114GA098115
length1,2041,087
definitionB6Ng01-304J13.b B6Ng01-304J13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttattagatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaaaatcctttcccaatctgttggtggcct
ttttgtcttactgacggtgtcttttgccttgcagaagctttgcaacttta
tgaggtcgcatttgtcgattcgcgatcttacagcacaagtcattgctgtt
ctattcaggaattttccccctgtacccatatctttgaggcttttccctac
tttctccactataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggaatggatcaattagcattcttc
tacatgataactgccagctgtgccagcaccatttgttgaaaatgctgtct
tttttccactggatggttttagctcccttgtcaaagatcaagtgaccata
ggtgtgtaggttcatttctgggtcttcaattctattccattggtctactt
gtctgtcactataccagtaccatgcagtttttatcacaattgctctgtag
tacagctttagttcaggcatggtgattccaccagaggttcttttatcctt
gagaagagtttttgctatcctaggttttttgttattccagatgaatctgc
cgattgctctttctaattcgttgaagaattgagttggaattttgatgggg
attgcattgaatctgtagattgcttttggcataatagccatttttactat
actgattatgctctggcgaggatgtggagaaagaggaacactactccatt
ttttggtgggattgcaagcttgtacaaccactctggaaatcagtctgggt
ggttccttagaaaatttggacatagtactactcagaggatcccgcaatac
ctctcctgggcatattatccagaagatgttccaacggttaagaaggacac
atgcttccactatgtacatagcagcctatttataaatagcccagaagctg
gaaagaaccagatgctcctcaaacgaaaggaatgggaaacagaaaatgtg
ggtacattacaccaatgggagtacctactcagctattaaaaaatggaacg
tatgatctaggcatgggatggaccttagaggggcattccatccctctgga
gtag
gaattcagtaggtttttaaaatttttaatataactagaaattccaagtgt
gtatccagagatcacttttcagagtcttgggcaggcttccctgaagcccg
ctgagctcaggctaactgaaatcaaaacaatattccatgctataaaatat
ttccctaattagtattataagaaataagcaaaataggtagtacaatagca
agaccatggtctctagacagaagaaacaaatatcaaatgctgtggagtta
aaaatgactttacagttttggaaattttaattttgtagtttcagtgcctt
tgagtatgaagaaaactttatgctatttaagatcatatttcaaaacctgt
tctttccacatagtccagaccctctcattaataattttttgcattcctat
aatgactgttataaatccctaagaacattaacttggcatcttggcatttg
tttctcctaccagattgtgggaagatatggggttgatcaggatacaggga
ctggttgaagtgttccggtccagagatttccaggtattggaggtttaatg
tcctgtgttatcatgttcttcaaatgattcttagtcattttatgagggct
aagatgaaaggtacaggcagacagctaagaaagaagcaagtctccccatg
gtttatacaacagtagaatacaaaccaataaaacgggtatcagaatgcag
agagataagttaaggtctttatgcccaagactggcagattaaagtgacat
gataaagcaaaggagccaacagttgtctaaaataacaacaaaaaacccca
accagagaaatagtggatccttaggaactgaacattggcgggatacgaat
ttgaactggtctgagcaagtgtagctttctatgattcttactaacacgta
agtatgatagaaccctgaaagtatgttatgccagttatctaaagcaataa
gttgcctctggcaaattgtatttttactaaaatgtttcttagctgggttt
tgcaccagaatgcagacaaattagaattacaacttataaagatattgaat
acactagaacatacatctaattatattactgtatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_46091375_46092462
seq2: B6Ng01-304J13.g_66_1152 (reverse)

seq1  AAAATACAGT-ATATATTTAGATGTATGTTCTAGTGTATTC-ATATCTTT  48
      |||||||||| ||||| |||||||||||||||||||||||| ||||||||
seq2  AAAATACAGTAATATAATTAGATGTATGTTCTAGTGTATTCAATATCTTT  50

seq1  TTAATAAGTTTGTAATTTCTTATTTGTCTGCATTCTGGTGCAAAACCCAG  98
         ||||| |||||| |||| |||||||||||||||||||||||||||||
seq2  ---ATAAG-TTGTAA-TTCTAATTTGTCTGCATTCTGGTGCAAAACCCAG  95

seq1  CTAAGAAACA-TGTAGT-AAAATACAATTTGCCAGA-GCCACTTATTGCT  145
      |||||||||| | |||| |||||||||||||||||| || ||||||||||
seq2  CTAAGAAACATTTTAGTAAAAATACAATTTGCCAGAGGCAACTTATTGCT  145

seq1  TTAGATTACTGGCATAACATACTTTCAGGTTTCTATCAATACTTACGTGT  195
      |||||| |||||||||||||||||||||| ||||||| ||||||||||||
seq2  TTAGATAACTGGCATAACATACTTTCAGGGTTCTATC-ATACTTACGTGT  194

seq1  TAGTAAGAATCATAGAAAGCTACACTTGCTCAGACCAGTTCAAATTCGTA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGAATCATAGAAAGCTACACTTGCTCAGACCAGTTCAAATTCGTA  244

seq1  TCCCGCCAATGTTCAGTTCCTAAGGATCCACTATTTCTCTGGTTGGGGTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGCCAATGTTCAGTTCCTAAGGATCCACTATTTCTCTGGTTGGGGTT  294

seq1  TTTTGTTGTTATTTTAGACAACTGTTGGCTCCTTTGCTTTATCATGTCAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTGTTATTTTAGACAACTGTTGGCTCCTTTGCTTTATCATGTCAC  344

seq1  TTTAATCTGCCAGTCTTGGGCATAAAGACCTTAACTTATCTCTCTGCATT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCTGCCAGTCTTGGGCATAAAGACCTTAACTTATCTCTCTGCATT  394

seq1  CTGATACCCGTTTTATTGGTTTGTATTCTACTGTTGTATAAACCATGGGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATACCCGTTTTATTGGTTTGTATTCTACTGTTGTATAAACCATGGGG  444

seq1  AGACTTGCTTCTTTCTTAGCTGTCTGCCTGTACCTTTCATCTTAGCCCTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGCTTCTTTCTTAGCTGTCTGCCTGTACCTTTCATCTTAGCCCTC  494

seq1  ATAAAATGACTAAGAATCATTTGAAGAACATGATAACACAGGACATTAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGACTAAGAATCATTTGAAGAACATGATAACACAGGACATTAAA  544

seq1  CCTCCAATACCTGGAAATCTCTGGACCGGAACACTTCAACCAGTCCCTGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAATACCTGGAAATCTCTGGACCGGAACACTTCAACCAGTCCCTGT  594

seq1  ATCCTGATCAACCCCATATCTTCCCACAATCTGGTAGGAGAAACAAATGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGATCAACCCCATATCTTCCCACAATCTGGTAGGAGAAACAAATGC  644

seq1  CAAGATGCCAAGTTAATGTTCTTAGGGATTTATAACAGTCATTATAGGAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGCCAAGTTAATGTTCTTAGGGATTTATAACAGTCATTATAGGAA  694

seq1  TGCAAAAAATTATTAATGAGAGGGTCTGGACTATGTGGAAAGAACAGGTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAAAATTATTAATGAGAGGGTCTGGACTATGTGGAAAGAACAGGTT  744

seq1  TTGAAATATGATCTTAAATAGCATAAAGTTTTCTTCATACTCAAAGGCAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATATGATCTTAAATAGCATAAAGTTTTCTTCATACTCAAAGGCAC  794

seq1  TGAAACTACAAAATTAAAATTTCCAAAACTGTAAAGTCATTTTTAACTCC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTACAAAATTAAAATTTCCAAAACTGTAAAGTCATTTTTAACTCC  844

seq1  ACAGCATTTGATATTTGTTTCTTCTGTCTAGAGACCATGGTCTTGCTATT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATTTGATATTTGTTTCTTCTGTCTAGAGACCATGGTCTTGCTATT  894

seq1  GTACTACCTATTTTGCTTATTTCTTATAATACTAATTAGGGAAATATTTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTACCTATTTTGCTTATTTCTTATAATACTAATTAGGGAAATATTTT  944

seq1  ATAGCATGGAATATTGTTTTGATTTCAGTTAGCCTGAGCTCAGCGGGCTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATGGAATATTGTTTTGATTTCAGTTAGCCTGAGCTCAGCGGGCTT  994

seq1  CAGGGAAGCCTGCCCAAGACTCTGAAAAGTGATCTCTGGATACACACTTG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAGCCTGCCCAAGACTCTGAAAAGTGATCTCTGGATACACACTTG  1044

seq1  GAATTTCTAGTTATATTAAAAATTTTAAAAACCTACTGAATTC  1088
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCTAGTTATATTAAAAATTTTAAAAACCTACTGAATTC  1087