BAC Information

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BAC

Clone NameB6Ng01-306A16
Chromosome2 (Build37)
Map Location 44,958,542 - 44,959,260
singlet/doubletsinglet
Overlap geneZeb2
Upstream geneArhgap15, Gtdc1
Downstream geneLOC100042661, LOC100041337, LOC666604
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306A16.bB6Ng01-306A16.g
ACCGA099180GA099181
length718496
definitionB6Ng01-306A16.b B6Ng01-306A16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatcttagactttttacctcaagtggagctttggccacgaatag
tacagacatgccatcttgtaacactatatgcctgtcaggagggacaggca
gggttgagcatcaactatataaggctggtaactagggaaaggcccaacaa
acagccacaaacacctaagttactttactcaaccactaccctctgagcct
ctccctctctctctctctctctctctctctctgtctctgtctctctctct
ctctctctctctctcttttcatcttggctttctgtggcagaatgcaaatg
gagcctgccggcggtgaaggactgaattgtgattaagaagaagaagagct
ctttctttgttcttccctcaggggatgtttactgggagagacacagagga
tcagatatgaaaggcattcaggtcagcattgatgtgagcgaaagtgaaat
catacctaaggcattcaaaacaccgccgtgtcaggggttcagctaacggt
gcagctactgtgtatctttcccagagaggcctgctgacaagtaaaaaaag
gtcaacctaaaaataaagaaaagttcctcccactgactggccatttcttt
tttccctaatttgtacaagatataaaaaaaccccccccccatttacttag
cacacatgacaaacagtttggattttttctctcccccactaccacacaga
taatcaaaccaacttcta

gaattccttagcttcccctaggctcatccttggaactcaggtcacctggc
atgtatcttttcaactctaaaatttgctcacttaaattgccaaagtgtgg
acactttgcccctccttagaattgggaacaaaacagccatggaaggagtt
acagagacaaagtttggagctgagacaaaaggatggaccatctagagact
gccatatccagggatccatcccataatcagcctccaaacgctgacaccat
tgcatacactagcaagattttgctgaaaggaccctgatatagctctctct
tgtgagactatgccggggccttgcaaacacagaagtgaatgctcacagtt
agctattggatggatcacaaggcccccaatggaggagctagagaaagcac
ccaaggagctaaagggaactgcaaccctataggtggaacaacaatatgaa
ctaaccagtaccccaaagttcttgtctctagctgcatatgtatcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_44958542_44959260
seq2: B6Ng01-306A16.b_48_765

seq1  GAATTCAATCTTAGACTTTTTACCTCAAGTGGAGCTGTGGCCACGAATAG  50
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAATTCAATCTTAGACTTTTTACCTCAAGTGGAGCTTTGGCCACGAATAG  50

seq1  TACAGACATGCCATCTTGTAACACTATATGCCTGTCAGGAGGGACAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGACATGCCATCTTGTAACACTATATGCCTGTCAGGAGGGACAGGCA  100

seq1  GGGTTGAGCATCAACTATATAAGGCTGGTAACTAGGGAAAGGCCCAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGAGCATCAACTATATAAGGCTGGTAACTAGGGAAAGGCCCAACAA  150

seq1  ACAGCCACAAACACCTAAGTTACTTTACTCAACCACTACCCTCTGAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCACAAACACCTAAGTTACTTTACTCAACCACTACCCTCTGAGCCT  200

seq1  CTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTGTCTCTCTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTGTCTCTCTCTCT  250

seq1  CTCTCTCTCTCTCTCTTTTCATCTTGGCTTTCTGTGGCAGAATGCAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTTTTCATCTTGGCTTTCTGTGGCAGAATGCAAATG  300

seq1  GAGCCTGCCGGCGGTGAAGGACTGAATTGTGATTAAGAAGAAGAAGAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGCCGGCGGTGAAGGACTGAATTGTGATTAAGAAGAAGAAGAGCT  350

seq1  CTTTCTTTGTTCTTCCCTCAGGGGATGTTTACTGGGAGAGACACAGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTGTTCTTCCCTCAGGGGATGTTTACTGGGAGAGACACAGAGGA  400

seq1  TCAGATATGAAAGGCATTCAGGTCAGCATTGATGTGAGCGAAAGTGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATATGAAAGGCATTCAGGTCAGCATTGATGTGAGCGAAAGTGAAAT  450

seq1  CATACCTAAGGCATTCAAAAGACCGCCGTGTCAGGGGTTCAGCTAACGGT  500
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CATACCTAAGGCATTCAAAACACCGCCGTGTCAGGGGTTCAGCTAACGGT  500

seq1  GCAGCTACTGTGTATC-TTCCCAGAGAGGCAAAAAAAAAAAAAAAAAAAA  549
      |||||||||||||||| |||||||||||||      | ||  ||||||| 
seq2  GCAGCTACTGTGTATCTTTCCCAGAGAGGCCTGCTGACAAGTAAAAAAAG  550

seq1  AAAAAAAAAAAAAAAAAGAAAAAAATCCTCCCACTGACTGGCCATTTCTT  599
         ||   ||||| |||| ||||  |||||||||||||||||||||||||
seq2  GTCAACCTAAAAATAAAG-AAAAGTTCCTCCCACTGACTGGCCATTTCTT  599

seq1  TTTTCCCTAATTTGCTACAAGAT-TATAAAAGCACCCCCCCCATTTACTT  648
      |||||||||||||| |||||||| || |||| | ||||||||||||||||
seq2  TTTTCCCTAATTTG-TACAAGATATAAAAAAACCCCCCCCCCATTTACTT  648

seq1  AGCACCACATGACACAACAGTTAGGA-TTTTTCTCTCCTCCAGGACCACA  697
      |||| ||||||||| ||||||| ||| ||||||||||| |||  ||||||
seq2  AGCA-CACATGACA-AACAGTTTGGATTTTTTCTCTCCCCCACTACCACA  696

seq1  CAGAAAATCAAACCAACTTCTA  719
      |||| |||||||||||||||||
seq2  CAGATAATCAAACCAACTTCTA  718


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