MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-306B21
Chromosome	2 (Build37)
Map Location	40,537,522 - 40,538,503
singlet/doublet	singlet
Overlap gene	Lrp1b
Upstream gene	LOC100042604, Magmas-ps, LOC666531
Downstream gene	LOC100042629
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042604 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042604
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 385 ESTs, 10 Proteins

name	Magmas-ps (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606732
definition	note : mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction pseudogene pseudo : _no_value

name	LOC666531 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666531
definition	note : eukaryotic translation elongation factor 1 alpha 1 pseudogene pseudo : _no_value

name	Lrp1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94217 MGI:2151136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042629 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042629
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	LOC100042604 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249304 GeneID:100042604
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 385 ESTs, 10 Proteins product : similar to vacuolar H+ ATPase G1 transcript_id : XM_001479550.1

name	Lrp1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16519538 GeneID:94217 MGI:2151136
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : low density lipoprotein-related protein 1B (deleted in tumors) transcript_id : NM_053011.1

name	LOC100042629 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249306 GeneID:100042629
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : hypothetical protein LOC100042629 transcript_id : XM_001479594.1

name	LOC100042604 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249305 GeneID:100042604
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479600.1

name	Lrp1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16519539 GeneID:94217 MGI:2151136
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005041 - low-density lipoprotein receptor activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : low density lipoprotein receptor related protein LRP1B/LRP-DIT product : low density lipoprotein-related protein 1B protein_id : NP_443737.1

name	LOC100042629 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249307 GeneID:100042629
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479644.1

clone name	MSMg01-517G08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-150J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388N03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-309D15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-387K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397K05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-152K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439D11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-495A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095G01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-139J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252G16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-306B21.b	B6Ng01-306B21.g
ACC	GA099236	GA099237
length	1,055	984
definition	B6Ng01-306B21.b	B6Ng01-306B21.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcactgtttgcaatagatgagtagcaatccattgtgtaaatgtacc acattttctgtatccattcctctgttgaaggacatctgggttctttccag cttctggctactataaataaggctgctatgaacataatggaacatgtgtc cttgttatatgttggagcatcttttaggtatatgctcaggagtggtatag ctgggtccttgtggaaagccggtacgtgagcaatcgcatgtgtgccgcca gtaatctctgaggagagccgtgtgtgctgcgagcaatcgccattataaga tggcacgggcctccgctgtgcctaactagtaaacaagccttgtacgcagg tgcaagagtgaattcactcctagtcactcccattctcggggtgtaatagt ggggtgatgggcaagcaacgaatcgggagctgtcacgccatatcaggagc tgaaacgtcatgctgcgggttataaaagcagcgccattttcccggttcgg gatcttcctgagaagcaagcaataaagctcttgccgcggaagattctggt ttgttgcgtctttcttgccggtcgagcgggacgcaataggtcctcaggta attaatatgatgaccaattttctgaggaactaccagactgatttccagat tggttgtaccagcttgcaatcacaccaacagtggagaagtgggtcctctt tctccacatcctcaccagcatctgctgtgacctgagtttttgatcttagc cattctgactggtgtgaggtggaatgcattttgggtttgcatttccctaa tgactaaggatgttgagagaagcacctgacccttgtaatacttgaggttc cagggagtagtgagtgcttttcagccattgtatattccttagttgagaat tatttgttaagctctgtaacagagtggatgttcccagccaaatgttggat agagcatgggggttccccaatggaagaagtaaagaaagactgtaagaact tgaagggtttgtacccccatggaagaaccataatatcgacgtacgagaca ctccg	gaattctttgtttacatctgtaccccatctttaagaattcatttggaata acaaaaaacaaaaacaaaaaaacaaaaaaacaaaaaatgggatagaaaaa tactattctctacaaaaacttacctctggggaaataaccatacctgacct aaagctgtattacagagtaatcatgataatattgtaaggtattagtacag agacaggcacatatatcaaaggaatagaattgaagacccagaaatgaacc cagatacctatgctcacttgatctttgacaaaagagctaaaaccatccag tcaacatgtagaggaatgcacagtgatccattcttatctctttgtataaa gcacaagtccaagtgaatcaagaacatccacataaaaccaggtacactga aactaatagaagagaaattggggaagattcttgaaaacatggcctcaggg aaaaatttcttgactaatattttgatagggccctaacttacctgtgtatt tagaccctttaattattctgaagaaatcaatcaacatgtatcttctaggt tgttcaagaatattaacaaaaacttcatttgttagaatggtaatttcctt agtctttctcaaatgggacatgtcactatggagtcattggttttgacctc tttgttggcctaggaacaaatgaacaattttttatgcaattttatataac acatgatttgatttgttttacttttctttctgcctttttggggttaagca atacatgctatgatgttctctattcccaggcaattctcttttctgtctct ttaactcagtttaaataatcacctttgggctggtgagatggctcagtggg taagagcacccaacctgctcttccgaaaggtcaggagttcaaatcccagc aaccacatggtggctcacaaccatccgcaaggagatctgactccctcttc tggagtgttctgagacagctacagtgtactttaa
quality values	Open. Hide. 58 26 19 23 58 26 21 36 58 49 38 47 58 58 42 33 33 52 45 58 36 19 49 58 58 58 58 58 49 52 49 62 32 29 13 24 31 35 24 31 23 27 27 38 31 40 47 62 62 47 47 62 54 62 62 46 62 62 62 62 62 62 62 62 38 39 62 62 62 62 62 62 62 62 62 56 56 51 56 28 62 44 37 56 62 56 56 62 49 49 62 62 62 62 62 62 62 62 47 56 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 47 54 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 51 62 62 62 62 62 62 62 62 62 62 49 44 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 54 62 62 56 62 62 54 62 62 62 62 62 62 62 62 56 62 62 62 62 47 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 56 62 62 62 62 62 62 62 62 62 62 62 36 56 62 34 34 62 62 62 56 62 56 62 62 56 62 62 62 62 56 56 62 54 47 62 62 62 62 62 50 62 56 62 47 39 62 54 62 52 52 33 62 49 43 62 62 62 62 62 62 54 54 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 52 54 62 62 62 52 62 62 52 62 54 62 62 50 58 58 58 54 52 52 52 54 58 54 58 50 54 58 58 39 52 50 58 58 54 58 58 58 58 31 58 52 35 54 54 45 54 54 54 58 52 58 58 58 54 58 58 52 54 52 58 52 54 52 54 54 54 54 52 28 54 30 54 42 54 58 58 52 58 58 58 52 58 58 54 52 47 41 58 58 48 46 58 58 58 52 58 52 58 42 54 42 54 42 51 50 50 51 28 16 50 53 51 50 51 51 40 47 47 46 51 53 52 50 24 58 40 42 50 30 51 53 53 51 51 54 50 49 25 58 45 32 47 45 51 52 58 58 52 50 53 37 58 23 41 49 41 32 41 39 43 44 48 50 54 42 41 54 49 42 43 33 22 39 33 50 58 40 47 51 53 34 46 51 50 31 44 42 32 46 52 50 52 51 50 53 32 47 40 38 49 37 41 47 32 50 40 37 39 39 47 39 58 24 58 58 31 39 27 58 28 20 41 35 50 36 12 31 31 40 50 26 50 32 37 24 50 31 33 51 34 39 19 42 47 42 52 38 40 42 37 52 39 36 45 34 53 39 20 40 35 52 45 30 53 54 54 54 54 32 39 32 33 38 40 34 22 39 40 31 42 39 41 42 37 33 26 34 53 47 24 42 29 28 35 24 51 26 49 38 41 33 26 41 31 14 28 49 51 37 27 49 11 26 45 42 27 28 32 38 54 45 31 54 25 14 10 34 18 32 31 28 24 23 27 16 30 31 23 32 22 29 40 31 21 31 20 44 35 18 31 26 31 10 11 31 34 15 40 32 41 32 41 27 29 32 21 25 28 22 18 19 33 15 40 20 16 24 21 16 26 37 18 28 23 17 31 23 29 31 35 24 20 30 20 30 45 45 31 25 26 15 15 46 28 33 14 20 9 30 23 21 11 33 25 25 20 20 42 23 22 25 21 32 9 26 37 14 18 31 16 37 27 9 9 46 9 14 11 18 25 26 22 15 11 10 9 20 7 18 32 15 29 24 9 16 9 15 10 15 28 38 28 12 11 31 10 8 37 27 16 32 14 23 14 22 31 10 12 8 21 29 31 13 17 24 25 16 41 7 24 14 9 31 31 25 21 14 27 23 25 14 10 9 8 25 43 11 11 9 13 11 31 48 25 6 8 23 32 20 19 12 7 12 33 15 12 12 20 17 17 21 23 37 14 13 31 25 9 7 12 18 31 28 32 12 4 8 11 15 18 7 5 14 21 9 5 24 8 17 26 10 8 14 6 5 19 14 7 9 18 7 6 18 15 8 7 6 3 4 11 5 4	Open. Hide. 62 47 34 37 62 62 62 62 62 62 17 18 14 10 20 7 21 21 20 21 14 20 21 20 22 44 39 62 62 62 62 59 62 62 62 62 62 59 62 59 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 43 43 45 31 27 34 34 56 59 51 56 56 50 51 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 54 54 62 62 59 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 49 62 56 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 43 52 52 52 51 62 52 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 52 62 52 58 58 45 42 58 58 58 58 58 49 58 48 54 30 58 52 58 58 58 58 54 54 58 52 52 58 58 54 54 58 54 58 52 42 58 58 58 58 58 58 58 48 58 58 54 58 47 58 45 58 54 54 58 58 58 58 58 58 58 58 54 52 58 58 49 58 52 47 38 54 54 58 50 58 58 52 58 58 58 58 51 58 58 53 41 58 43 51 50 58 47 47 48 49 49 49 50 49 49 54 51 45 58 52 58 51 58 58 46 58 58 49 50 48 40 58 51 51 50 46 58 43 58 58 58 51 58 53 58 58 52 51 52 35 58 51 50 58 50 48 50 51 46 52 58 51 52 52 38 38 41 46 51 40 58 50 42 39 43 50 50 50 39 51 58 58 58 50 40 53 42 58 44 43 58 49 41 51 51 50 58 43 42 51 50 50 53 33 49 53 52 54 39 34 50 35 19 46 31 41 54 28 28 28 38 37 49 54 50 45 42 41 49 50 50 46 51 53 39 39 42 32 44 40 49 52 39 49 49 44 38 40 26 35 42 45 51 54 54 51 37 52 49 44 37 49 35 40 19 40 46 42 31 26 47 49 40 45 35 46 33 26 52 51 54 54 54 54 45 35 33 52 32 14 41 30 52 49 33 41 34 32 35 24 36 31 45 32 31 45 53 39 32 52 47 32 41 23 51 52 51 32 53 51 28 32 32 32 49 49 32 52 32 53 42 31 31 30 28 46 37 51 51 51 41 51 46 46 38 17 30 31 37 23 29 13 40 33 31 30 17 32 31 31 31 27 34 39 42 31 42 28 32 31 31 31 30 31 31 38 32 41 25 27 32 41 30 26 31 28 43 30 31 42 42 48 48 27 27 21 32 23 36 31 31 31 46 27 30 30 27 33 30 31 21 36 48 35 27 46 31 31 29 27 31 43 30 27 20 18 46 29 37 47 27 31 34 26 29 25 30 39 22 27 24 30 39 29 36 35 32 16 17 36 46 44 21 30 26 18 35 11 31 27 21 28 28 6 19 7 9 17 29 24 32 31 31 31 23 31 14 30 48 12 33 22 8 32 23 25 20 31 24 37 18 20 20 44 30 31 32 38 27 21 27 32 17 18 21 14 12 11 11 34 30 31 23 34 17 20 19 27 28 22 8 20 7 13 20 32 25 10 18 11 13 11 18 12 15 15 25 21 11 12 15 17 11 13 16 48 31 19 5 4 6 9 15 23 21 28 20 8 3 3 8 10 27 27 9 4 3 14 19 24 28 28 21 22 6 9 6 18 13 20 15 15 40 9 3 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_40537522_40538503
seq2: B6Ng01-306B21.g_64_1047 (reverse)

seq1  TTAAAGTACACTGTAGCTGTCCTCAG-ACACTCCAGAAGAGGGAGTCAGA  49
      |||||||||||||||||||| ||||| |||||||||||||||||||||||
seq2  TTAAAGTACACTGTAGCTGT-CTCAGAACACTCCAGAAGAGGGAGTCAGA  49

seq1  TCTCCTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTGCGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACT  99

seq1  CCTGACC-TTCGGAAGAGCA-GTTGGGTGCTCTTACCCACTGAGCCATCT  147
      ||||||| |||||||||||| |||||||||||||||||||||||||||||
seq2  CCTGACCTTTCGGAAGAGCAGGTTGGGTGCTCTTACCCACTGAGCCATCT  149

seq1  CACCAGCCCAAAGGTGATTATTTAAACTGAGTTAAAGAGACAGAAAAGAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGCCCAAAGGTGATTATTTAAACTGAGTTAAAGAGACAGAAAAGAG  199

seq1  AATTGCCTGGGAATAGAGAACATCATAGCATGTATTGCTTAACCCCAAAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCCTGGGAATAGAGAACATCATAGCATGTATTGCTTAACCCCAAAA  249

seq1  AGGCAGAAAGAAAAGTAAAACAAATCAAATCATGTGTTATATAAAATTGC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAAAGAAAAGTAAAACAAATCAAATCATGTGTTATATAAAATTGC  299

seq1  ATAAAAAATTGTTCATTTGTTCCTAGGCCAACAAAGAGGTCAAAACCAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAATTGTTCATTTGTTCCTAGGCCAACAAAGAGGTCAAAACCAAT  349

seq1  GACTCCATAGTGACATGTCCCATTTGAGAAAGACTAAGGAAATTACCATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCATAGTGACATGTCCCATTTGAGAAAGACTAAGGAAATTACCATT  399

seq1  CTAACAAATGAAGTTTTTGTTAATATTCTTGAACAACCTAGAAGATACAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAAATGAAGTTTTTGTTAATATTCTTGAACAACCTAGAAGATACAT  449

seq1  GTTGATTGATTTCTTCAGAATAATTAAAGGGTCTAAATACACAGGTAAGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTGATTTCTTCAGAATAATTAAAGGGTCTAAATACACAGGTAAGT  499

seq1  TAGGGCCCTATCAAAATATTAGTCAAGAAATTTTTCCCTGAGGCCATGTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCCCTATCAAAATATTAGTCAAGAAATTTTTCCCTGAGGCCATGTT  549

seq1  TTCAAGAATCTTCCCCAATTTCTCTTCTATTAGTTTCAGTGTACCTGGTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAATCTTCCCCAATTTCTCTTCTATTAGTTTCAGTGTACCTGGTT  599

seq1  TTATGTGGATGTTCTTGATTCACTTGGACTTGTGCTTTATACAAAGAGAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGGATGTTCTTGATTCACTTGGACTTGTGCTTTATACAAAGAGAT  649

seq1  AAGAATGGATCACTGTGCATTCCTCTACATGTTGACTGGATGGTTTTAGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGGATCACTGTGCATTCCTCTACATGTTGACTGGATGGTTTTAGC  699

seq1  TCTTTTGTCAAAGATCAAGTGAGCATAGGTATCTGGGTTCATTTCTGGGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTCAAAGATCAAGTGAGCATAGGTATCTGGGTTCATTTCTGGGT  749

seq1  CTTCAATTCTATTCCTTTGATATATGTGCCTGTCTCTGTACTAATACCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATTCTATTCCTTTGATATATGTGCCTGTCTCTGTACTAATACCTT  799

seq1  ACAATATTATCATGATTACTCTGTAATACAGCTTTAGGTCAGGTATGGTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATTATCATGATTACTCTGTAATACAGCTTTAGGTCAGGTATGGTT  849

seq1  ATTTCCCCAGAGGTAAGTTTTTGTAGAGAATAGTATTTTTCTATCCCATT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCCAGAGGTAAGTTTTTGTAGAGAATAGTATTTTTCTATCCCATT  899

seq1  TTTTGTTTTTTTGTTTTTTTGTTTTTGTTTTTTGTTATTCCAAATGAATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTTTGTTTTTTTGTTTTTGTTTTTTGTTATTCCAAATGAATT  949

seq1  CTTAAAGATGGGGTACAGATGTAAACAAAGAATTC  982
      |||||||||||||||||||||||||||||||||||
seq2  CTTAAAGATGGGGTACAGATGTAAACAAAGAATTC  984

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information