MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-306L01
Chromosome	2 (Build37)
Map Location	176,459,199 - 176,587,436
singlet/doublet	doublet
Overlap gene	LOC100043387, LOC100039123
Upstream gene	LOC620804, LOC100039000, LOC100043126, LOC100039017, LOC100039036, LOC100039049, LOC626832, OTTMUSG00000016203, LOC100039060, LOC668030, LOC627914, LOC100039093, LOC668039, LOC100039109, LOC100043381
Downstream gene	LOC626877, LOC100039156, LOC100039166, 6230416C02Rik, LOC635470, LOC100043403, LOC100039198, LOC100043406, LOC668066, LOC621442, LOC628308, OTTMUSG00000016571, LOC100039233, LOC626802, LOC329575
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC620804 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620804
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100039000 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039000
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 63 ESTs, 2 Proteins

name	LOC100043126 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043126
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 38 ESTs

name	LOC100039017 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	LOC100039036 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039036
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 mRNAs, 1339 ESTs, 7 Proteins

name	LOC100039049 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039049
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC626832 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626832
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 71 ESTs

name	OTTMUSG00000016203 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667962 MGI:3709288
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 38 ESTs

name	LOC100039060 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039060
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	LOC668030 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668030
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins

name	LOC627914 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627914
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 53 ESTs, 3 Proteins

name	LOC100039093 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039093
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 36 ESTs, 3 Proteins pseudo : _no_value

name	LOC668039 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668039
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 53 ESTs, 3 Proteins

name	LOC100039109 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100043381 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 53 ESTs, 1 Protein

name	LOC100043387 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043387
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 62 ESTs, 1 Protein

name	LOC100039123 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039123
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 51 ESTs, 2 Proteins

name	LOC626877 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626877
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 ESTs, 1 Protein

name	LOC100039156 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100039166 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039166
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	6230416C02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545490 MGI:3615331
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 44 ESTs, 1 Protein

name	LOC635470 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:635470
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 532 ESTs, 8 Proteins

name	LOC100043403 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043403
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 66 ESTs, 1 Protein

name	LOC100039198 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039198
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100043406 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043406
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs

name	LOC668066 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668066
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	LOC621442 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621442
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 mRNAs, 1184 ESTs, 5 Proteins pseudo : _no_value

name	LOC628308 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628308
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 38 ESTs

name	OTTMUSG00000016571 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433520 MGI:3649813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039233 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039233
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC626802 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626802
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	LOC329575 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:329575
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039000 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250457 GeneID:100039000
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 63 ESTs, 2 Proteins product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein transcript_id : XM_001472066.1

name	LOC100043126 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250465 GeneID:100043126
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 38 ESTs product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein transcript_id : XM_001480068.1

name	LOC100039017 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250459 GeneID:100039017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein transcript_id : XM_001472096.1

name	LOC100039036 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250461 GeneID:100039036
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 mRNAs, 1339 ESTs, 7 Proteins product : similar to ribosomal protein S8 transcript_id : XM_001472131.1

name	LOC626832 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250467 GeneID:626832
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 71 ESTs product : similar to gonadotropin inducible ovarian transcription factor 1, transcript variant 3 transcript_id : XM_001004273.2

name	OTTMUSG00000016203 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94367700 GeneID:667962 MGI:3709288
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 38 ESTs product : predicted gene, OTTMUSG00000016203 transcript_id : XM_001004267.1

name	LOC100039060 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250463 GeneID:100039060
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein transcript_id : XM_001472180.1

name	LOC668030 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250469 GeneID:668030
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins product : similar to gonadotropin inducible ovarian transcription factor 1 transcript_id : XM_001487779.1

name	LOC627914 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250479 GeneID:627914
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 52 ESTs, 3 Proteins product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein, transcript variant 6 transcript_id : XM_902680.3

name	LOC668039 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250481 GeneID:668039
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 52 ESTs, 3 Proteins product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein, transcript variant 10 transcript_id : XM_902710.3

name	LOC100039109 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250472 GeneID:100039109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein transcript_id : XM_001472282.1

name	LOC100043381 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250483 GeneID:100043381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 52 ESTs, 1 Protein product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein, transcript variant 1 transcript_id : XM_001480586.1

name	LOC100043381 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250485 GeneID:100043381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 50 ESTs, 1 Protein product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein, transcript variant 2 transcript_id : XM_001480589.1

name	LOC100043387 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250487 GeneID:100043387
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 61 ESTs, 1 Protein product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein, transcript variant 1 transcript_id : XM_001480593.1

name	LOC100043387 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250489 GeneID:100043387
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 59 ESTs product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein, transcript variant 2 transcript_id : XM_001480597.1

name	LOC100039123 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250474 GeneID:100039123
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 51 ESTs, 2 Proteins product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein transcript_id : XM_001472314.1

name	LOC635470 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250491 GeneID:635470
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 532 ESTs, 8 Proteins product : similar to ribosomal protein L27a-like transcript_id : XM_915945.3

name	LOC100043403 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250492 GeneID:100043403
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 66 ESTs, 1 Protein product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein transcript_id : XM_001480607.1

name	LOC100043406 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250494 GeneID:100043406
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs product : similar to gag protein transcript_id : XM_001480617.1

name	LOC668066 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367735 GeneID:668066
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : novel KRAB box and zinc finger, C2H2 type domain containing protein, transcript variant 4 transcript_id : XM_001004338.1

name	LOC628308 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250496 GeneID:628308
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 38 ESTs product : similar to Zinc finger protein 14 (Zinc finger protein KOX6) (Gonadotropin inducible transcription repressor-4) (GIOT-4) transcript_id : XM_001480623.1

name	OTTMUSG00000016571 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701565 GeneID:433520 MGI:3649813
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, OTTMUSG00000016571 transcript_id : NM_001024825.1

name	LOC626802 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367751 GeneID:626802
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : similar to zinc finger protein 709, transcript variant 1 transcript_id : XM_894982.2

name	LOC329575 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:85701571 GeneID:329575
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypothetical LOC329575 transcript_id : NM_001024849.1

name	LOC100039000 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250458 GeneID:100039000
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein protein_id : XP_001472116.1

name	LOC100043126 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250466 GeneID:100043126
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein protein_id : XP_001480118.1

name	LOC100039017 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250460 GeneID:100039017
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein protein_id : XP_001472146.1

name	LOC100039036 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250462 GeneID:100039036
definition	codon_start : 1 product : similar to ribosomal protein S8 protein_id : XP_001472181.1

name	LOC626832 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94367703 GeneID:626832
definition	codon_start : 1 product : similar to LOC329575 protein isoform 3 protein_id : XP_001004273.1

name	OTTMUSG00000016203 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94367701 GeneID:667962 MGI:3709288
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein protein_id : XP_001004267.1

name	LOC100039060 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250464 GeneID:100039060
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein protein_id : XP_001472230.1

name	LOC668030 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250470 GeneID:668030
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein protein_id : XP_001487829.1

name	LOC627914 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250480 GeneID:627914
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein isoform 6 protein_id : XP_907773.3

name	LOC668039 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250482 GeneID:668039
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein isoform 10 protein_id : XP_907803.2

name	LOC100039109 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250473 GeneID:100039109
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein protein_id : XP_001472332.1

name	LOC100043381 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250484 GeneID:100043381
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein isoform 1 protein_id : XP_001480636.1

name	LOC100043381 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250486 GeneID:100043381
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein isoform 2 protein_id : XP_001480639.1

name	LOC100043387 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250488 GeneID:100043387
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein isoform 1 protein_id : XP_001480643.1

name	LOC100043387 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250490 GeneID:100043387
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein isoform 2 protein_id : XP_001480647.1

name	LOC100039123 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250475 GeneID:100039123
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein protein_id : XP_001472364.1

name	LOC635470 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82888947 GeneID:635470
definition	codon_start : 1 product : similar to ribosomal protein L27a-like protein_id : XP_921038.1

name	LOC100043403 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250493 GeneID:100043403
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein protein_id : XP_001480657.1

name	LOC100043406 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250495 GeneID:100043406
definition	codon_start : 1 product : similar to gag protein protein_id : XP_001480667.1

name	LOC668066 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94367736 GeneID:668066
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein isoform 4 protein_id : XP_001004338.1

name	LOC628308 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250497 GeneID:628308
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480673.1

name	OTTMUSG00000016571 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701566 GeneID:433520 MGI:3649813
definition	codon_start : 1 product : hypothetical protein LOC433520 protein_id : NP_001019996.1

name	LOC626802 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94367752 GeneID:626802
definition	codon_start : 1 product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein isoform 1 protein_id : XP_900075.2

name	LOC329575 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:85701572 GeneID:329575
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC329575 protein_id : NP_001020020.1

name	LOC620804 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620804
definition	number : 3 pseudo : _no_value

name	LOC620804 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620804
definition	number : 2 pseudo : _no_value

name	LOC620804 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620804
definition	number : 1 pseudo : _no_value

name	LOC100039049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039049
definition	number : 1 pseudo : _no_value

name	LOC100039049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039049
definition	number : 2 pseudo : _no_value

name	LOC100039049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039049
definition	number : 3 pseudo : _no_value

name	LOC100039049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039049
definition	number : 4 pseudo : _no_value

name	LOC100039049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039049
definition	number : 5 pseudo : _no_value

name	LOC100039049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039049
definition	number : 6 pseudo : _no_value

name	LOC100039049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039049
definition	number : 7 pseudo : _no_value

name	LOC100039156 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039156
definition	number : 7 pseudo : _no_value

name	LOC100039156 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039156
definition	number : 6 pseudo : _no_value

name	LOC100039156 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039156
definition	number : 5 pseudo : _no_value

name	LOC100039156 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039156
definition	number : 4 pseudo : _no_value

name	LOC100039156 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039156
definition	number : 3 pseudo : _no_value

name	LOC100039156 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039156
definition	number : 2 pseudo : _no_value

name	LOC100039156 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039156
definition	number : 1 pseudo : _no_value

name	LOC100039166 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039166
definition	number : 3 pseudo : _no_value

name	LOC100039166 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039166
definition	number : 2 pseudo : _no_value

name	LOC100039166 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039166
definition	number : 1 pseudo : _no_value

name	LOC100039198 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039198
definition	number : 8 pseudo : _no_value

name	LOC100039198 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039198
definition	number : 7 pseudo : _no_value

name	LOC100039198 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039198
definition	number : 6 pseudo : _no_value

name	LOC100039198 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039198
definition	number : 5 pseudo : _no_value

name	LOC100039198 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039198
definition	number : 4 pseudo : _no_value

name	LOC100039198 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039198
definition	number : 3 pseudo : _no_value

name	LOC100039198 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039198
definition	number : 2 pseudo : _no_value

name	LOC100039198 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039198
definition	number : 1 pseudo : _no_value

name	LOC100039233 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039233
definition	number : 1 pseudo : _no_value

name	LOC100039233 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039233
definition	number : 2 pseudo : _no_value

name	LOC100039233 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039233
definition	number : 3 pseudo : _no_value

name	LOC100039233 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039233
definition	number : 4 pseudo : _no_value

name	LOC100039233 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039233
definition	number : 5 pseudo : _no_value

name	LOC100039233 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039233
definition	number : 6 pseudo : _no_value

name	LOC100039233 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039233
definition	number : 7 pseudo : _no_value

name	LOC100039093 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250471 GeneID:100039093
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 36 ESTs, 3 Proteins product : similar to novel KRAB box and zinc finger, C2H2 type domain containing protein pseudo : _no_value transcript_id : XR_030632.1

name	LOC626877 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250476 GeneID:626877
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 ESTs, 1 Protein product : similar to zinc finger protein 709 transcript_id : XR_030668.1

name	6230416C02Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149250477 GeneID:545490 MGI:3615331
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 44 ESTs, 1 Protein product : RIKEN cDNA 6230416C02 gene transcript_id : XR_030701.1

name	LOC621442 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250478 GeneID:621442
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 mRNAs, 1184 ESTs, 5 Proteins product : similar to ribosomal protein S8 pseudo : _no_value transcript_id : XR_030711.1

clone name	MSMg01-495B08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-518C07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-368D11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-376H03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-454H19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-538K03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-450G10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-212D15
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-149J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323K21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-306L01.b	B6Ng01-306L01.g
ACC	GA099654	GA099655
length	1,163	1,016
definition	B6Ng01-306L01.b	B6Ng01-306L01.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(176,586,265 - 176,587,436)	(176,459,199 - 176,460,215)
sequence	gaattcattacccactggttcaagctaacctgcccaaattaaacacccac gaatctagttttatatacgtccatgcataattaatacaatctgtgaaatt acaaaatcattctcactgccctaatcaggcccttctcgataacagtggcc cctgcagcatactcccctttcctttggtctgtgacttagctcttgtcagc actgttttacctgacagtgtacacagtaagctgttcctctggttctcatc ctgccaagtgtatttccacacacaagcccctgccacaaaggttttttcca gtgcagtcttataataaagttactcagaggccacagcctggtccaaaagg agagactaggtccacaaaagacctcacaggtggccccatctgtctggctg atgcttaccatcctggctctgggaagacctagtacacaggcatcctttgc taagatgctagctcctcctctttgtgggacatgacactgcacttaccatg tgtgaagttctgagcttgcttgagctaaattcacagcatccagcgaagac actaagaacagatcacacagaaacactgagatcagctgagttacacagag aaacttgcaggcttggtacccggaagtcactgcctcttctaactggcagc tccatgtggaggttctgattggctattgaatcttgagtgacatgagcaac acccttagggttagagtttgctgaagggacacaatatagtgtttccagcc tgggccaatccttttccatatctgcagatttccagttcagtagcaccaat gtgtctcctccaatagcctacctgtctgttctcccgccaagcccttggga ggggctaagattcctgatccctgctgcttacctgcctgcctctccacctt tctggtcagtgaccctgagttcactgctttggagcttgcctgagctccaa tgacaggactcagaggcaatttcccttctctctgggatcaggctggatag ttgcatatccattaatcagctgaacactggagttaccaactgtcacaggt ggtcagtgccagaaattattaagccactgaagaggtttttaggaccacaa ctttgttttgtgcttcaggcctgggtcagtattgcaagtacttcacttaa tggcctaatgaga	gaattcccattttaggatctgaattatgtagatttgtgcaatccttgttg acaaatttaattgagctcagaaatgtaaaacacatgccattcgctgtagc tgtgtgtgttagattatagatcttagtagttaacaaagcacttagggaca aggtcaaacactatctcataaatgcctttccttctaccaagataggcctg atctttttcaaatcagtatagtgacatatttttcaattatatttatcttt ttaaaaagccaatatttggtattattttttaaatttttattttctttatg tataggtgctctgacctcttacttcttcctattctccaatatttcccaga aatcaataatttaattcctatttttaaagagattacatatcttactgttt acagcaacattggtagctcaggctttccttatgccatgtagttaagcctt gctttgagcacctgaacctaaaaccttccttgctctttctgagggtagaa gacatggcttcggtgattaacacctgtagcctaacagcagaggattaagc agtgtggcctttgctctatctcagaaggaactgctggtctctaactttta gcctgcaggtcagaagtcacaggaagaaaatgagacactcaaagaagtgg ttatggagtttttactaagttgtcaaaagttacctatgaaagctatctaa gaggaaaagcgaaaagatcctaagtggggaaaggcaaaaaaacttctcct ttctcttttccatatctccttgtcctctgtacttataaatctttcagaat acctgatcacatgttactgagtacactacaagttcacacaaaaaatcaaa tcataaattgagagagaagtttacaacagagaatggttattagtaaaact agattgggtgggtgttattttgggcaggttagcttgagccagtgagtgat gaattcccatttatgatctgtattatagaaatgtgcaatctttggtgacc atattagagtgatctc
quality values	Open. Hide. 58 33 29 30 58 26 13 45 54 58 54 58 39 38 62 62 49 62 62 62 31 22 49 62 62 47 62 62 62 62 62 62 35 51 44 19 21 21 50 32 21 38 49 37 59 62 62 59 59 62 59 59 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 59 56 59 59 56 43 42 59 62 59 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 34 62 62 62 62 62 54 62 62 48 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 58 58 58 54 58 58 58 58 58 58 58 58 58 58 54 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 42 58 58 58 58 54 58 58 58 58 50 58 54 42 58 54 54 58 58 54 54 58 58 58 58 54 54 46 54 54 58 58 58 58 52 49 49 49 49 58 50 58 50 58 46 50 51 51 58 58 58 50 58 54 58 52 53 58 58 54 58 50 58 58 58 58 53 46 51 58 50 51 58 58 58 58 25 58 54 50 43 48 51 54 53 58 50 58 58 50 44 44 58 58 53 53 33 58 50 58 51 44 41 52 50 53 58 58 51 58 58 58 39 51 50 37 41 51 58 51 43 30 50 58 51 52 49 41 58 49 51 58 58 41 53 50 51 54 40 58 39 53 58 52 54 49 46 22 46 39 53 53 52 42 49 39 42 49 47 49 52 52 49 49 49 39 50 52 53 53 50 50 51 32 49 49 37 31 45 50 51 51 28 46 33 53 52 42 36 54 54 44 39 41 11 54 31 25 42 42 39 54 30 46 54 51 33 38 52 45 53 54 42 54 34 28 19 32 32 25 40 52 45 42 41 31 32 46 25 53 33 21 33 30 40 53 46 26 28 46 33 17 28 26 32 37 42 53 31 52 52 34 31 28 23 31 31 42 33 42 33 30 38 32 32 21 51 32 28 31 29 36 51 30 31 33 31 43 43 28 42 36 35 31 23 32 31 45 43 51 31 31 42 32 42 43 31 32 30 25 35 43 26 37 29 27 31 26 31 33 33 33 31 32 40 25 32 33 30 23 40 21 30 29 32 21 37 37 32 33 23 32 24 18 41 31 25 12 46 32 30 25 31 27 35 20 31 16 41 31 43 34 36 30 32 28 41 28 27 31 30 34 31 33 34 30 27 21 19 19 38 22 30 30 31 16 25 17 26 31 22 22 32 38 31 31 48 37 34 34 33 35 18 34 34 18 30 36 32 22 47 17 14 31 36 15 26 17 31 31 33 24 28 27 32 43 16 24 24 22 10 34 17 14 19 11 24 18 25 31 11 27 22 14 17 9 9 16 32 32 31 14 24 10 29 18 33 27 5 4 10 11 22 27 21 14 21 47 24 10 40 14 19 16 13 4 5 5 11 6 9 29 6 34 14 14 25 5 9 9 28 12 14 16 16 28 6 17 12 21 17 16 19 9 14 10 25 4 8 21 13 18 27 26 23 24 26 20 19 13 5 4 6 22 21 21 7 8 6 18 21 13 8 17 6 11 8 18 20 14 23 8 12 6 11 14 16 11 17 4 10 21 6 4 8 6 14 6 6 11 30 15 11 5 6 7 24 5 13 16 16 5 22 11 15 15 15 6 11 18 5 5 2 7 28 28 3 2 2 7 6 4 7 8 11 23 22 8 11 24 16 6 5 29 26 16 7 5 12 3 4 10 14 9 9 13 5 5 5 7 7 3 2 2 3 3 2 5 2 2 8 8 13 7 6 6 7 4 5 4 12 5 18 4 5 23 19 8 23 13 4 4 6 5 3 10 9 7 3 11	Open. Hide. 62 47 43 37 62 62 62 47 42 62 62 24 23 16 15 27 20 24 32 24 34 28 34 29 44 56 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 56 59 62 62 59 59 59 34 43 38 59 62 62 59 62 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 41 62 62 52 62 52 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 47 39 46 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 54 48 22 58 45 38 58 49 58 58 58 58 58 58 58 58 58 36 35 58 58 58 54 54 54 58 51 54 52 54 52 54 48 54 35 58 38 26 58 58 52 38 58 58 58 58 58 58 54 52 51 49 49 54 58 52 58 58 58 49 52 52 54 58 52 58 49 52 39 58 54 54 54 42 58 58 43 54 52 50 51 52 33 58 58 47 46 58 36 41 34 28 49 58 40 58 46 47 51 58 53 46 58 51 40 58 48 42 50 58 43 35 58 47 46 58 54 50 50 51 58 58 58 39 36 40 49 29 51 28 50 53 50 32 50 50 58 58 52 41 46 51 32 44 43 50 52 51 53 38 58 48 35 49 49 49 52 58 53 53 58 37 46 12 39 50 58 58 58 32 33 36 49 58 58 58 28 39 32 30 53 40 33 32 38 39 58 58 39 41 40 54 38 25 44 14 40 54 54 54 54 54 42 39 39 54 54 53 40 54 52 54 54 52 42 37 24 54 54 39 31 49 28 39 42 40 52 37 37 54 31 34 51 32 36 51 37 45 37 54 26 22 26 31 34 40 22 27 54 30 40 42 40 54 19 26 34 28 41 33 31 24 29 47 32 52 32 31 26 29 31 21 31 40 24 40 31 35 32 45 33 23 30 24 31 30 36 39 31 30 18 14 36 43 25 39 28 33 33 42 32 51 46 46 47 25 29 32 33 51 32 31 33 28 35 18 46 34 24 33 26 28 28 40 23 31 30 34 24 19 31 48 33 21 31 25 30 43 20 26 42 16 25 24 27 31 27 24 28 27 25 31 31 15 28 30 48 48 30 32 34 31 31 34 11 32 15 48 25 27 41 48 33 21 38 12 6 16 29 48 46 24 10 32 32 35 32 25 27 13 25 25 11 31 16 19 14 15 5 24 22 31 20 16 27 28 21 25 20 21 24 31 30 14 30 16 16 37 38 8 26 29 32 24 30 24 8 11 23 10 22 5 12 11 14 9 12 21 5 29 15 5 9 15 16 23 15 9 4 4 16 6 20 15 16 5 6 7 11 7 12 6 10 10 26 6 7 6 8 7 18 19 16 13 11 9 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_176586265_176587436
seq2: B6Ng01-306L01.b_42_1204 (reverse)

seq1  TCTCAT--AGCCATTAGGTGGAAAGTACTTGCAATTTACCTGAACCCAGC  48
      ||||||   ||||||| |||  |||||||||||||    |||| ||  ||
seq2  TCTCATTAGGCCATTAAGTG--AAGTACTTGCAAT---ACTGACCCAGGC  45

seq1  CTGAAGCCACAAAACAAAGTTTGTGTCCAAAAAACCCTCTTCAGTTGC-T  97
      |||||| ||||||||||||||   |||| ||||| |||||||||| || |
seq2  CTGAAG-CACAAAACAAAGTTGTGGTCCTAAAAA-CCTCTTCAGTGGCTT  93

seq1  AATA--TTCTGGCACTGACCACCTGTGGACAGTTTGGTAACTCCAGTG-T  144
      ||||  |||||||||||||||||||| ||||| ||||||||||||||| |
seq2  AATAATTTCTGGCACTGACCACCTGT-GACAG-TTGGTAACTCCAGTGTT  141

seq1  CAGCTGATTAATGGGATATGCAAACTATCCAGCTTGATTCCAGGAGGAAG  194
      |||||||||||| |||||||| ||||||||||| |||| ||| |||  ||
seq2  CAGCTGATTAAT-GGATATGC-AACTATCCAGCCTGATCCCA-GAG--AG  186

seq1  AAGGGAAATTGCCTCCTGAGTCCTGTCATTGGAGCTCAGGCAAGCTCCAA  244
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAGGGAAATTGCCT-CTGAGTCCTGTCATTGGAGCTCAGGCAAGCTCCAA  235

seq1  AGCAGTGAACTCAGGGTCACTGACCAGAAAGGTGGAGAGGCAGGCAGGTA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGAACTCAGGGTCACTGACCAGAAAGGTGGAGAGGCAGGCAGGTA  285

seq1  AGCAGCAGGGATCAGGAATCTTAGCCCCTCCCAAGGGCTTGGCGGGAGAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCAGGGATCAGGAATCTTAGCCCCTCCCAAGGGCTTGGCGGGAGAA  335

seq1  CAGACAGGTAGGCTATTGGAGGAGACACATTGGTGCTACTGAACTGGAAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGGTAGGCTATTGGAGGAGACACATTGGTGCTACTGAACTGGAAA  385

seq1  TCTGCAGATATGGAAAAGGATTGGCCCAGGCTGGAAACACTATATTGTGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGATATGGAAAAGGATTGGCCCAGGCTGGAAACACTATATTGTGT  435

seq1  CCCTTCAGCAAACTCTAACCCTAAGGGTGTTGCTCATGTCACTCAAGATT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCAGCAAACTCTAACCCTAAGGGTGTTGCTCATGTCACTCAAGATT  485

seq1  CAATAGCCAATCAGAACCTCCACATGGAGCTGCCAGTTAGAAGAGGCAGT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCCAATCAGAACCTCCACATGGAGCTGCCAGTTAGAAGAGGCAGT  535

seq1  GACTTCCGGGTACCAAGCCTGCAAGTTTCTCTGTGTAACTCAGCTGATCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCGGGTACCAAGCCTGCAAGTTTCTCTGTGTAACTCAGCTGATCT  585

seq1  CAGTGTTTCTGTGTGATCTGTTCTTAGTGTCTTCGCTGGATGCTGTGAAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTTCTGTGTGATCTGTTCTTAGTGTCTTCGCTGGATGCTGTGAAT  635

seq1  TTAGCTCAAGCAAGCTCAGAACTTCACACATGGTAAGTGCAGTGTCATGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCAAGCAAGCTCAGAACTTCACACATGGTAAGTGCAGTGTCATGT  685

seq1  CCCACAAAGAGGAGGAGCTAGCATCTTAGCAAAGGATGCCTGTGTACTAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAAAGAGGAGGAGCTAGCATCTTAGCAAAGGATGCCTGTGTACTAG  735

seq1  GTCTTCCCAGAGCCAGGATGGTAAGCATCAGCCAGACAGATGGGGCCACC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCCCAGAGCCAGGATGGTAAGCATCAGCCAGACAGATGGGGCCACC  785

seq1  TGTGAGGTCTTTTGTGGACCTAGTCTCTCCTTTTGGACCAGGCTGTGGCC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGTCTTTTGTGGACCTAGTCTCTCCTTTTGGACCAGGCTGTGGCC  835

seq1  TCTGAGTAACTTTATTATAAGACTGCACTGGAAAAAACCTTTGTGGCAGG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTAACTTTATTATAAGACTGCACTGGAAAAAACCTTTGTGGCAGG  885

seq1  GGCTTGTGTGTGGAAATACACTTGGCAGGATGAGAACCAGAGGAACAGCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTGTGTGGAAATACACTTGGCAGGATGAGAACCAGAGGAACAGCT  935

seq1  TACTGTGTACACTGTCAGGTAAAACAGTGCTGACAAGAGCTAAGTCACAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGTACACTGTCAGGTAAAACAGTGCTGACAAGAGCTAAGTCACAG  985

seq1  ACCAAAGGAAAGGGGAGTATGCTGCAGGGGCCACTGTTATCGAGAAGGGC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGGAAAGGGGAGTATGCTGCAGGGGCCACTGTTATCGAGAAGGGC  1035

seq1  CTGATTAGGGCAGTGAGAATGATTTTGTAATTTCACAGATTGTATTAATT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTAGGGCAGTGAGAATGATTTTGTAATTTCACAGATTGTATTAATT  1085

seq1  ATGCATGGACGTATATAAAACTAGATTCGTGGGTGTTTAATTTGGGCAGG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGGACGTATATAAAACTAGATTCGTGGGTGTTTAATTTGGGCAGG  1135

seq1  TTAGCTTGAACCAGTGGGTAATGAATTC  1172
      ||||||||||||||||||||||||||||
seq2  TTAGCTTGAACCAGTGGGTAATGAATTC  1163

seq1: chr2_176459199_176460215
seq2: B6Ng01-306L01.g_65_1080

seq1  GAATTCCCATTTTAGGATCTGAATTATGTAGATTTGTGCAATCCTTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTTTAGGATCTGAATTATGTAGATTTGTGCAATCCTTGTTG  50

seq1  ACAAATTTAATTGAGCTCAGAAATGTAAAACACATGCCATTCGCTGTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTTAATTGAGCTCAGAAATGTAAAACACATGCCATTCGCTGTAGC  100

seq1  TGTGTGTGTTAGATTATAGATCTTAGTAGTTAACAAAGCACTTAGGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTTAGATTATAGATCTTAGTAGTTAACAAAGCACTTAGGGACA  150

seq1  AGGTCAAACACTATCTCATAAATGCCTTTCCTTCTACCAAGATAGGCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAACACTATCTCATAAATGCCTTTCCTTCTACCAAGATAGGCCTG  200

seq1  ATCTTTTTCAAATCAGTATAGTGACATATTTTTCAATTATATTTATCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTCAAATCAGTATAGTGACATATTTTTCAATTATATTTATCTTT  250

seq1  TTAAAAAGCCAATATTTGGTATTATTTTTTAAATTTTTATTTTCTTTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGCCAATATTTGGTATTATTTTTTAAATTTTTATTTTCTTTATG  300

seq1  TATAGGTGCTCTGACCTCTTACTTCTTCCTATTCTCCAATATTTCCCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGTGCTCTGACCTCTTACTTCTTCCTATTCTCCAATATTTCCCAGA  350

seq1  AATCAATAATTTAATTCCTATTTTTAAAGAGATTACATATCTTACTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATAATTTAATTCCTATTTTTAAAGAGATTACATATCTTACTGTTT  400

seq1  ACAGCAACATTGGTAGCTCAGGCTTTCCTTATGCCATGTAGTTAAGCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAACATTGGTAGCTCAGGCTTTCCTTATGCCATGTAGTTAAGCCTT  450

seq1  GCTTTGAGCACCTGAACCTAAAACCTTCCTTGCTCTTTCTGAGGGTAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAGCACCTGAACCTAAAACCTTCCTTGCTCTTTCTGAGGGTAGAA  500

seq1  GACATGGCTTCGGTGATTAACACCTGTAGCCTAACAGCAGAGGATTAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGCTTCGGTGATTAACACCTGTAGCCTAACAGCAGAGGATTAAGC  550

seq1  AGTGTGGCCTTTGCTCTATCTCAGAAGGAACTGCTGGTCTCTAACTTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGCCTTTGCTCTATCTCAGAAGGAACTGCTGGTCTCTAACTTTTA  600

seq1  GCCTGCAGGTCAGAAGTCACAGGAAGAAAATGAGACACTCAAAGAAGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCAGGTCAGAAGTCACAGGAAGAAAATGAGACACTCAAAGAAGTGG  650

seq1  TTATGGAGTTTTTACTAAGTTGTCAAAAGTTACCTATGAAAGCTATCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGAGTTTTTACTAAGTTGTCAAAAGTTACCTATGAAAGCTATCTAA  700

seq1  GAGGAAAAGCGAAAAGATCCTAAGTGGGGAAAGGCAAAAAAACTTCTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAAGCGAAAAGATCCTAAGTGGGGAAAGGCAAAAAAACTTCTCCT  750

seq1  TTCTCTTTTCCATATCTCCTTGTCCTCTGTACTTATAAATCTTTCAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTTCCATATCTCCTTGTCCTCTGTACTTATAAATCTTTCAGAAT  800

seq1  ACCTGATCACATGTTACTGAGTACACTACAAGTTCACACAAAAAATCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGATCACATGTTACTGAGTACACTACAAGTTCACACAAAAAATCAAA  850

seq1  TCATAAATTGAGAGAGAAGTTTACAACAGAGAATGGTTATTAGTAAAACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAATTGAGAGAGAAGTTTACAACAGAGAATGGTTATTAGTAAAACT  900

seq1  AGATT-GGTGGGTGTTTATTTTGGGCAGGTTAGCTTGAGCCAGTGAGTGA  949
      ||||| |||||||| |||||||||||||||||||||||||||||||||||
seq2  AGATTGGGTGGGTG-TTATTTTGGGCAGGTTAGCTTGAGCCAGTGAGTGA  949

seq1  TGAATTCCCATTTTATGATCTGTATTATAAGATATGTGCAAACCTTGGTG  999
      |||||||||| ||||||||||||||||| ||| |||||||| | ||||||
seq2  TGAATTCCCA-TTTATGATCTGTATTAT-AGAAATGTGCAATCTTTGGTG  997

seq1  A-CATATTTAAGTGATCTC  1017
      | ||||||  |||||||||
seq2  ACCATATTAGAGTGATCTC  1016

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Alignment Information