BAC Information

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BAC

Clone NameB6Ng01-307C21
Chromosome2 (Build37)
Map Location 55,536,242 - 55,537,350
singlet/doubletsinglet
Overlap genenone
Upstream geneGalnt13, LOC666936, Kcnj3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307C21.bB6Ng01-307C21.g
ACCGA100016GA100017
length5471,106
definitionB6Ng01-307C21.b B6Ng01-307C21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
caagcttctggactaatatccagttatcagtgagtgcatatcatatgttt
tcttttgtgattgggttacctcactcaggatgatatcttccagatccatc
cattttcctaagaatttcataaatccattgtttttaatagctgtgtagta
atccattatgtaaatgaaccacattttctacatccattcctctgttgagg
gacatctgggttctgtccagcctcttcatattataaataagactgctgtg
aacattgtggagcatgtgtccttcatacatgttggagcatcttctgagta
tatgcccaggagtgatattgctaggttctccggtagtactatgtccaatt
ttctgaggaactgccaaacttatttctagagtgtttgtatgagctcgcag
tccaaccagcaatggaggagtgtttctcttcctctacattcctgggatgg
ccaagctgatcatcaatcggaggagaggcccttggtcctgtgaaggttct
ttgccccagtataggggaatgccaaggccaggaagtgggagtgggtg

gaattctgttatgtctatgttctctgtgtaattatgtctaatttggtcag
catgtggacaaaacccttgcttctatacaggagtactttaaaagcagata
tttttgaattgtatcttgagttttgttttatcaacaccaatggtgtgtat
ttacataagcattcacttttctgacttgaactgttagcaagctacaagga
attttaaatcaaaccagaaaaattctaatttttctcatcagtgagaaaaa
actaatgaagtagattatatagattggccaagatagactgcaattattct
aagtcaattattcatttagcatttctttttatatatctcaaatagggtat
atttattattcatcataaatgacctagttcctatttgtacaattgaatta
cagaccaattcttctgtcaattttaaacaaatacaatatatttttattct
atcttgcatttcaatatgagataatattctctaacacttaaaatgttctt
gtgatgaataaggagctttatcccctttaaaatcccccaaaactaataga
taattaatttaggatgctcagtattcattcatccagtattttaagaacta
agacttgaataataatataagtacttgatcatttttgtagtaatgataga
gttagagtttataggttatgggacaaacatatgaaaaataaggaccagtt
gctttaagcagccagagaaatcacaaaccaaactaactgaagtcagcact
ttgaaagaagaggtggaaggatcaggaatttgagtctaatttcatctgca
tagtgagtttggatgctttagctacctatattataccgtctcaaatacag
cagctcccaagaaaacaaggagatattatcttgcaaatcaatattacctt
gcaaatcaagtgattattttttaaaagaaaagcagtcaagatttaaagaa
aaatgtattctcatacacatgtgctaagaatgtaaatttttcactggcat
ggtagctcacgccttttaatcccagcacttgggagcaaagcaaggtagat
ttctgagttgaggccagcttgggccttacaaaagtaaggtctggcagcca
ggctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_55536242_55537350
seq2: B6Ng01-307C21.g_65_1170

seq1  GAATTCTGTTATGTCTATGTTCTCTGTGTAATTATGTCTAATTTGGTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTATGTCTATGTTCTCTGTGTAATTATGTCTAATTTGGTCAG  50

seq1  CATGTGGACAAAACCCTTGCTTCTATACAGGAGTACTTTAAAAGCAGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGACAAAACCCTTGCTTCTATACAGGAGTACTTTAAAAGCAGATA  100

seq1  TTTTTGAATTGTATCTTGAGTTTTGTTTTATCAACACCAATGGTGTGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAATTGTATCTTGAGTTTTGTTTTATCAACACCAATGGTGTGTAT  150

seq1  TTACATAAGCATTCACTTTTCTGACTTGAACTGTTAGCAAGCTACAAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATAAGCATTCACTTTTCTGACTTGAACTGTTAGCAAGCTACAAGGA  200

seq1  ATTTTAAATCAAACCAGAAAAATTCTAATTTTTCTCATCAGTGAGAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAATCAAACCAGAAAAATTCTAATTTTTCTCATCAGTGAGAAAAA  250

seq1  ACTAATGAAGTAGATTATATAGATTGGCCAAGATAGACTGCAATTATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGAAGTAGATTATATAGATTGGCCAAGATAGACTGCAATTATTCT  300

seq1  AAGTCAATTATTCATTTAGCATTTCTTTTTATATATCTCAAATAGGGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAATTATTCATTTAGCATTTCTTTTTATATATCTCAAATAGGGTAT  350

seq1  ATTTATTATTCATCATAAATGACCTAGTTCCTATTTGTACAATTGAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTATTCATCATAAATGACCTAGTTCCTATTTGTACAATTGAATTA  400

seq1  CAGACCAATTCTTCTGTCAATTTTAAACAAATACAATATATTTTTATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCAATTCTTCTGTCAATTTTAAACAAATACAATATATTTTTATTCT  450

seq1  ATCTTGCATTTCAATATGAGATAATATTCTCTAACACTTAAAATGTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGCATTTCAATATGAGATAATATTCTCTAACACTTAAAATGTTCTT  500

seq1  GTGATGAATAAGGAGCTTTATCCCCTTTAAAATCCCCCAAAACTAATAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGAATAAGGAGCTTTATCCCCTTTAAAATCCCCCAAAACTAATAGA  550

seq1  TAATTAATTTAGGATGCTCAGTATTCATTCATCCAGTATTTTAAGAACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATTTAGGATGCTCAGTATTCATTCATCCAGTATTTTAAGAACTA  600

seq1  AGACTTGAATAATAATATAAGTACTTGATCATTTTTGTAGTAATGATAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGAATAATAATATAAGTACTTGATCATTTTTGTAGTAATGATAGA  650

seq1  GTTAGAGTTTATAGGTTATGGGACAAACATATGAAAAATAAGGACCAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAGTTTATAGGTTATGGGACAAACATATGAAAAATAAGGACCAGTT  700

seq1  GCTTTAAGCAGCCAGAGAAATCACAAACCAAACTAACTGAAGTCAGCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAGCAGCCAGAGAAATCACAAACCAAACTAACTGAAGTCAGCACT  750

seq1  TTGAAAGAAGAGGTGGAAGGATCAGGAATTTGAGTCTAATTTCATCTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGAAGAGGTGGAAGGATCAGGAATTTGAGTCTAATTTCATCTGCA  800

seq1  TAGTGAGTTTGGATGCTTTAGCTACCTATATTATACCGTCTCAAATACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGTTTGGATGCTTTAGCTACCTATATTATACCGTCTCAAATACAG  850

seq1  CAGCTCCCAAGAAAACAAGGAGATATTATCTTGCAAATCAATATTACCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCCAAGAAAACAAGGAGATATTATCTTGCAAATCAATATTACCTT  900

seq1  GCAAATCAAGTGATTATTTTTTAAAAGAAAAGCAGTCAAGATTTAAAGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCAAGTGATTATTTTTTAAAAGAAAAGCAGTCAAGATTTAAAGAA  950

seq1  AAATGTATTCTCATACACATGTGCTAAGAATGTAAATTTTTCACCTGGCA  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||| 
seq2  AAATGTATTCTCATACACATGTGCTAAGAATGTAAATTTTTCA-CTGGC-  998

seq1  ATGGTAGCTCACGCC-TTTAATCCCAGCACTTGGGAAGCAAAGGCAGGTA  1049
      ||||||||||||||| ||||||||||||||||||| |||||||  |||||
seq2  ATGGTAGCTCACGCCTTTTAATCCCAGCACTTGGG-AGCAAAGCAAGGTA  1047

seq1  GATTTCTGAGTTTGAGGCCAGCCTGG--CCTAC-AAAGTAAGTTCCTGGG  1096
      |||||||||| ||||||||||| |||  | ||| |||||||| ||   ||
seq2  GATTTCTGAG-TTGAGGCCAGCTTGGGCCTTACAAAAGTAAGGTC--TGG  1094

seq1  CAGCCAGGGCTAC  1109
      |||||| ||||||
seq2  CAGCCA-GGCTAC  1106


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