BAC Information

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BAC

Clone NameB6Ng01-311E17
Chromosome2 (Build37)
Map Location 87,393,311 - 87,394,255
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038
Downstream geneLOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311E17.bB6Ng01-311E17.g
ACCGA103049GA103050
length1,0571,157
definitionB6Ng01-311E17.b B6Ng01-311E17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaacagggtaatttcaaatggcaaagaagcacttaaagaagtg
ttcaaagtccttagtgatcagggcaatgcaaatcaaaacaatcctgagat
tccaccttacaccaatcagaatggctaagatcataacctcaggtgacagc
acaatttgatgaggatgtggagaaaggggaacactgctgcattgctggtg
ggattgcaaactggtacaatcactctggaaatcaatctagagattcctca
gagaattagaaatacatctattgaagacccagtttattactcttgggcat
atacctaaaagatgccccaccataccacaggtgcatgggctccactatgt
tcatagcagccttaattatgatacccagaagcatgaaaaaatccatatgt
cccacaatgaaatcatcgatacagaaaacatggttccgggctggtgagat
ggctcagtgggtaagagcacccgactgctcttccgaaggtccaaagttca
aatcccagcaaccacatggtggctcacaaccacccgtaatgagatctgat
gccctcttctggtgcgtctgaagacagctacagtgtacttacatataata
aataaatcttaaaaaaaaaaaaaaacaccctttaaaaaaaaaaaaaaaga
aaacatggtgcttacagacaagagactagtatagctctcctctgagaagt
ccaacaagcagcttattgagacagaagcagatacttacatccaaccaatg
gacttaagttggggatgcctgtggttgaattaggtaaatgatggaagaaa
ctgaggaagagggagacctcataggaagaccagcagtcacaactaagctg
gacccctgagatctctcagacattgatccaccaactaggcagcatatact
acctggtatgaggccaggacacattacagcagagactgctattctggcct
cagtgagagagatatgctaacccttgagagactttagcccagtatgagag
ctgcacagtgtgggtgaatagggacattctcttggagactggtgggagga
ggaatgg
gaattctcacctgaggaatagcgaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaactggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacctaga
tgcccctcaacagaggaattgatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatagatggacctggaggccatcatcctgagtgaggtaacacattcacaa
agaaactcacacaatatgtactcactgataagtgcatattagccccaaac
ctaggatacccaagatataagatataatttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagatttggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa
aggacccagatgtagctgtctcttgtgagactatgccggggccctagcaa
acacagaagtggatgctcacagtcagctaatggatggatcataggctccc
aatggagagctagagaagtagccagagctaaagggatctgcaaccctata
ggcgacacattatgactacagtacccggagctctgactctagctgcatat
gtatcaaagaatgctagtcgcatcactgcaagaagagtccatgactgcca
acctttattgaccaagttcaggtaactcagctaaaagggggatgggttgg
tccatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87393311_87394255
seq2: B6Ng01-311E17.b_169_1100

seq1  TAAGATCATAACCTCAGGTGACAGCACAATTTGATGAGGATGTGGAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCATAACCTCAGGTGACAGCACAATTTGATGAGGATGTGGAGAAA  50

seq1  GGGGAACACTGCTGCATTGCTGGTGGGATTGCAAACTGGTACAATCACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACACTGCTGCATTGCTGGTGGGATTGCAAACTGGTACAATCACTC  100

seq1  TGGAAATCAATCTAGAGATTCCTCAGAGAATTAGAAATACATCTATTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATCAATCTAGAGATTCCTCAGAGAATTAGAAATACATCTATTGAA  150

seq1  GACCCAGTTTATTACTCTTGGGCATATACCTAAAAGATGCCCCACCATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGTTTATTACTCTTGGGCATATACCTAAAAGATGCCCCACCATAC  200

seq1  CACAGGTGCATGGGCTCCACTATGTTCATAGCAGCCTTAATTATGATACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTGCATGGGCTCCACTATGTTCATAGCAGCCTTAATTATGATACC  250

seq1  CAGAAGCATGAAAAAATCCATATGTCCCACAATGAAATCATCGATACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCATGAAAAAATCCATATGTCCCACAATGAAATCATCGATACAGA  300

seq1  AAACATGGTTCCGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGTTCCGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGAC  350

seq1  TGCTCTTCCGAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTCCGAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTC  400

seq1  ACAACCACCCGTAATGAGATCTGATGCCCTCTTCTGGTGCGTCTGAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCACCCGTAATGAGATCTGATGCCCTCTTCTGGTGCGTCTGAAGAC  450

seq1  AGCTACAGTGTACTTACATATAATAAATAAATCTTAAAAAAAAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAGTGTACTTACATATAATAAATAAATCTTAAAAAAAAAAAAAAA  500

seq1  CACCCTTTAAAAAAAAAAAAAAAGAAAACATGGTGCTTACAGACAAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTTTAAAAAAAAAAAAAAAGAAAACATGGTGCTTACAGACAAGAGA  550

seq1  CTAGTATAGCTCTCCTCTGAGAAGTCCAACAAGCAGCTTATTGAGACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTATAGCTCTCCTCTGAGAAGTCCAACAAGCAGCTTATTGAGACAGA  600

seq1  AGCAGATACTTACATCCAACCAATGGACTTAAGTTGGGGATGCCTGTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATACTTACATCCAACCAATGGACTTAAGTTGGGGATGCCTGTGGT  650

seq1  TGAATTAGGTAAATGATGGAAGAAACTGAGGAAGAGGGAGACCTCATAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAGGTAAATGATGGAAGAAACTGAGGAAGAGGGAGACCTCATAGG  700

seq1  AAGACCAGCAGTCACAACTAAGCTGGACCCCTGAGATCTCTCAGACATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAGCAGTCACAACTAAGCTGGACCCCTGAGATCTCTCAGACATTG  750

seq1  ATCCACCAACTAGGCAGCATATACTACCTGGTATGAGGCCAGGACACAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATCCACCAACTAGGCAGCATATACTACCTGGTATGAGGCCAGGACAC-AT  799

seq1  TACAGCAGAGACTGCCTATTCTGGCCTCAGTGAGAGAAGATATGCCTAAC  850
      |||||||||||||| ||||||||||||||||||||| ||||||| |||||
seq2  TACAGCAGAGACTG-CTATTCTGGCCTCAGTGAGAG-AGATATG-CTAAC  846

seq1  CCTTGAGAGACTTTAGGCCCCAGGTAATGAGGAGGCCTGGCACAGTGTTG  900
      ||||||||||||||||  |||||   |||| |||  || |||||||| ||
seq2  CCTTGAGAGACTTTAG--CCCAG--TATGA-GAG--CT-GCACAGTG-TG  887

seq1  GGTGGATAGGGACATTCTCTTGGAGACAGGTGGGAGGAGGAATGG  945
      |||| |||||||||||||||||||||| |||||||||||||||||
seq2  GGTGAATAGGGACATTCTCTTGGAGACTGGTGGGAGGAGGAATGG  932