BAC Information

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BAC

Clone NameB6Ng01-312G02
Chromosome2 (Build37)
Map Location 173,145,557 - 173,145,814
singlet/doubletsinglet
Overlap genenone
Upstream gene2010011I20Rik, Aurka, Cstf1, F730031O20Rik, 2410001C21Rik, A330041C17Rik, 1700029J11Rik, LOC629957, Tcfap2c, LOC100043750, Bmp7, LOC100043751, Spo11, Rae1, Rbm38, Ctcfl, EG619800, Pck1, Zbp1, Tmepai
Downstream gene1700021F07Rik, 1700030G11Rik, LOC100043911, Rab22a, 1700010B08Rik, Vapb, LOC620189, LOC664880, LOC100043912, LOC664901, Stx16, Npepl1, Nespas, Gnas
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312G02.bB6Ng01-312G02.g
ACCGA103864GA103865
length1,013256
definitionB6Ng01-312G02.b B6Ng01-312G02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccattttgaatagggttatttggttc
tctggagtctaacttcttgagttctttgtatattttggatattggccctc
tattggatgtagggctagtaaagatcttttcccaatctgtaggttgctgg
gtttttttcctattgaccgtgtcctttgccttacagaagcttttcaattt
tatgagattccatttgtcaattgttgatcttagtgcccgagccattggtg
ttttgttcaggaaattttctcctgtgtcaatgagttcaaggttctttccc
actttctctcctattagtttcagtgtatctggctttatgtggaggtcctt
gatccacttgaacttgagctttgtacaaggagataagaatgggtcagttt
gcattcttctacatgcccaccaccagtgaaccagcaacatttgttgaata
tgctgtcttttctccaatgggtagttttggcttctttgtcaaagatcaag
tggccataggtgtgtgtgggtttatttttgggtcttcaattctattcaat
tgatctacccctacccgcctgtctctgtaccatgcagtttttatcactat
tgctctgtagtatagcttaagatcagggatagcgattccctcagaagttc
tttaattgttgagaatagttttttgttattccagatgagtttaagaattg
ttctttctatctctgtgaagaattgaattgaaatttttgttgtggatttc
attgaatctgtagattgcttttggtaagatggccatttttactatgttaa
tccataagcatgggagatatttccatcttctgaagtcttcttcaattttc
tttccttagagacttgaagttcttgtcatacaactctttcacttgcatgg
ttagagtcacaccaaaggtattttatatatttgtgattatagtgaaaggg
tggtgttacccttacttcttttgcaacccgtttattctttcagtagagga
ggctactgattgt
acttgtaagcctagatctttggggtacagaatttagcatacaatccatag
caacagaccaaacctcagcaggaggaggcaggtggatcagaaactctaga
ttacgctacatgagaccttgtctcaaaaaacaagaaaaggaaaactggat
gtgagcctgatcaccttgttcgtatgtgtatatatatacatatatatgtg
tatgcttgtatatgtgtgtatgtttgtgtatgtgtgtatgtatatatata
tatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_173145557_173145814
seq2: B6Ng01-312G02.g_72_327

seq1  ACTTGTAAGCCTAGATCTTTGGGGTACAGAATTTAGCATACAATCCATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTAAGCCTAGATCTTTGGGGTACAGAATTTAGCATACAATCCATAG  50

seq1  CAACAGACCAAACCTCAGCAGGAGGAGGCAGGTGGATCAGAAACTCTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGACCAAACCTCAGCAGGAGGAGGCAGGTGGATCAGAAACTCTAGA  100

seq1  TTACGCTACATGAGACCTTGTCTCAAAAAACAAGAAAAGGAAAACTGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGCTACATGAGACCTTGTCTCAAAAAACAAGAAAAGGAAAACTGGAT  150

seq1  GTGAGCCTGATCACCTTGTTCGTATGTGTATATATATACATATATATGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCTGATCACCTTGTTCGTATGTGTATATATATACATATATATGTG  200

seq1  TATGCTTGTATATGTGTGTATGTTTGTGTATGTGTGTATGTATATATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTGTATATGTGTGTATGTTTGTGTATGTGTGTATGTATATATATA  250

seq1  TATATGTG  258
      ||| ||  
seq2  TATGTG--  256