BAC Information

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BAC

Clone NameB6Ng01-314C13
Chromosome2 (Build37)
Map Location 46,086,453 - 46,087,580
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042661, LOC100041337, LOC666604
Downstream geneLOC383690
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314C13.bB6Ng01-314C13.g
ACCGA105177GA105178
length1,1561,116
definitionB6Ng01-314C13.b B6Ng01-314C13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatttccttaatctttcttgtagtagtttttgagttttgagtctt
acattaatgttttctttcttttttagttgattactgtaaaggagaagata
gcgatgcttagtttcattcctcagcatgaaaatacccagtctctgcagtt
ctatttgttaaggaaattttaaagttgtatttacaaaaagtcttttcttc
agtgtgtgttttgcatcctgtgtggaaaattaggttggtgtagctacagg
gttttactttgggatcctttcactctattagagtacgtggttggtgtgac
aaaacatttcctttggagatgaagcacatatgtctacccactccagatag
agagctcaaaacatatcaaaatatggacaccaccacataccaatttggtg
aaccaatgggatgtatgtggtgactcacaagattaagggtgagtggttat
ttgcaggagcagaaatgacacaaagacaggccatcaccaaattccactcc
agcatgggtgatatctggaaatctggagtacattgtacagcttgcaggca
gcccaatatggtggagagtggcctttccaggtgcctcaattggtttaaac
ctcttccaggcagtttggcttctttcaggcagatggtttcttctttcttt
tttgtagcttggctttcctagtcagagagggactctctgcttctattctt
tactctaaaaggggagacctggtaggttggtcactttcagggacttcttg
aagttatgttaaatggtttaccttattgtttaaggacctttccctccagg
atggaatttgacacagactatcacacatgatagcttagcacaattaagag
atatgcaaattcacgagtagttgtacttattaaagcctgagaacaattct
atctcttagatatagtgtgttttcagtggatagtgttaaattttcacatt
tcttggagtggaagaaaaaatgtatcaaaacctcatatcttttaattggg
tactctctcaagtctcatcttccaccccaagactttcttaccaatgttct
cttggtgtacctatttgttaggtaccctgtcttaaggttaacagcagtat
gcctagattatggtacgacattattcagtatcaattaatcaaaggttccc
cctaag
gaattcagaaaagatgattcatatggaacaatttcagctcttcaatgaga
tggctctaaaatcagcatgaatcaggctgacctgtaagcagtgtcataga
aacaggttctccaccctgttcttttgttattctcttcccctcccaggtct
ctgaagtcaagaatcctccatgtctcctcgtgtgctgctaataactaagt
cgaagccaggttctccacaggctctccttgtaaatctaattttcttatat
ccattgtccttttcctctccaacttgagatgagcagtagtcagaaatgaa
caagcttattattaataatatctggtattggtgcacactaaccccatctt
gaattcttgagaaatcatgactcattggaatctctccctgaatttcagta
ccagaagcacttctaggaagccccagcaatgtgtttttttgatgatactc
tttaggcaaatttacattttcaaagcagtaactttatgacagtcattggg
aagctacagtgtgaaatcatgcccactgcataccttggtgtaactatggg
aattaagtgtgatttttttttttacattttaagtgatttttaaaatgtct
aactaataataatttcttaaatggaaatcaaattccagtatcaaaaatat
agtttaattagaatacagatctgaccttcatttattgtttcaggtacttt
ttcataaaactcattgctcacagtcattatcacattatggactgttatca
caaaatatttaactaatctccagtccacagaaaataatggccctgcaatt
gtgagctgtggcgttttagagtcaatatatgaaaaatattaaccttttat
acttttttatgatatcttcctattcacaatttttgtcctctttgttcagt
tttttaggatcatttctccccagccagatgccttctagtcaccagcggat
gcttcatggagttgcttcagtgcaaggagccagccgtacatagttggaga
catgcgctggcatacatgcctgttagctgagggtctcaacattgctcact
ctgcataatgtcgatgtgatggatgaattcatgtgttctccagtccatac
cacagatctctcctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_46086453_46087580
seq2: B6Ng01-314C13.g_64_1179

seq1  GAATTCAGAAAAGATGATTCATATGGAACAATTTCAGCTCTTCAATGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAAAGATGATTCATATGGAACAATTTCAGCTCTTCAATGAGA  50

seq1  TGGCTCTAAAATCAGCATGAATCAGGCTGACCTGTAAGCAGTGTCATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTAAAATCAGCATGAATCAGGCTGACCTGTAAGCAGTGTCATAGA  100

seq1  AACAGGTTCTCCACCCTGTTCTTTTGTTATTCTCTTCCCCTCCCAGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGTTCTCCACCCTGTTCTTTTGTTATTCTCTTCCCCTCCCAGGTCT  150

seq1  CTGAAGTCAAGAATCCTCCATGTCTCCTCGTGTGCTGCTAATAACTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTCAAGAATCCTCCATGTCTCCTCGTGTGCTGCTAATAACTAAGT  200

seq1  CGAAGCCAGGTTCTCCACAGGCTCTCCTTGTAAATCTAATTTTCTTATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGCCAGGTTCTCCACAGGCTCTCCTTGTAAATCTAATTTTCTTATAT  250

seq1  CCATTGTCCTTTTCCTCTCCAACTTGAGATGAGCAGTAGTCAGAAATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTCCTTTTCCTCTCCAACTTGAGATGAGCAGTAGTCAGAAATGAA  300

seq1  CAAGCTTATTATTAATAATATCTGGTATTGGTGCACACTAACCCCATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTATTATTAATAATATCTGGTATTGGTGCACACTAACCCCATCTT  350

seq1  GAATTCTTGAGAAATCATGACTCATTGGAATCTCTCCCTGAATTTCAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAGAAATCATGACTCATTGGAATCTCTCCCTGAATTTCAGTA  400

seq1  CCAGAAGCACTTCTAGGAAGCCCCAGCAATGTGTTTTTTTGATGATACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGCACTTCTAGGAAGCCCCAGCAATGTGTTTTTTTGATGATACTC  450

seq1  TTTAGGCAAATTTACATTTTCAAAGCAGTAACTTTATGACAGTCATTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCAAATTTACATTTTCAAAGCAGTAACTTTATGACAGTCATTGGG  500

seq1  AAGCTACAGTGTGAAATCATGCCCACTGCATACCTTGGTGTAACTATGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTACAGTGTGAAATCATGCCCACTGCATACCTTGGTGTAACTATGGG  550

seq1  AATTAAGTGTGATTTTTTTTTTTACATTTTAAGTGATTTTTAAAATGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGTGTGATTTTTTTTTTTACATTTTAAGTGATTTTTAAAATGTCT  600

seq1  AACTAATAATAATTTCTTAAATGGAAATCAAATTCCAGTATCAAAAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATAATAATTTCTTAAATGGAAATCAAATTCCAGTATCAAAAATAT  650

seq1  AGTTTAATTAGAATACAGATCTGACCTTCATTTATTGTTTCAGGTACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAATTAGAATACAGATCTGACCTTCATTTATTGTTTCAGGTACTTT  700

seq1  TTCATAAAACTCATTGCTCACAGTCATTATCACATTATGGACTGTTATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAAACTCATTGCTCACAGTCATTATCACATTATGGACTGTTATCA  750

seq1  CAAAATATTTAACTAATCTCCAGTCCACAGAAAATAATGGCCCTGCAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATATTTAACTAATCTCCAGTCCACAGAAAATAATGGCCCTGCAATT  800

seq1  GTGAGCTGTGGCGTTTTAGAGTCAATATATGAAAAATATTAACCTTTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTGTGGCGTTTTAGAGTCAATATATGAAAAATATTAACCTTTTAT  850

seq1  ACTTTTTTATGATATCTTCCTATTCACAATTTTTGTCCTCTTTGTTCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTATGATATCTTCCTATTCACAATTTTTGTCCTCTTTGTTCAGT  900

seq1  TTTTTAGGATCATTTCTCCCCAGCCAGATGCCTTCTAGTCACCAGCGGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGGATCATTTCTCCCCAGCCAGATGCCTTCTAGTCACCAGCGGAT  950

seq1  GCTTCATGGAGTTGCTTCAGTGCAAGGAGCCAGCCGTACATAAGGTTTGG  1000
      ||||||||||||||||||||||||||||||||||||||||||    ||||
seq2  GCTTCATGGAGTTGCTTCAGTGCAAGGAGCCAGCCGTACATA---GTTGG  997

seq1  AGACATGCGCTGGCAATAACATGCCTGTTTAGCTGAGGGTCTCAAACATT  1050
      |||||||||||||||   ||||||||| ||||||||||||||| ||||||
seq2  AGACATGCGCTGGCA--TACATGCCTG-TTAGCTGAGGGTCTC-AACATT  1043

seq1  GCTCACTCTGCATTAAATTGTCGATGTGATTGATGAAATCATGTGTTCTC  1100
      |||||||||||||   | |||||||||||| |||||| ||||||||||||
seq2  GCTCACTCTGCAT---AATGTCGATGTGATGGATGAATTCATGTGTTCTC  1090

seq1  AGGGCAAATACCACAAGATCTCTCCTAC  1128
        | |  ||||||| |||||||||||||
seq2  CAGTC-CATACCAC-AGATCTCTCCTAC  1116