BAC Information

Click to search

BAC

Clone NameB6Ng01-314I12
Chromosome2 (Build37)
Map Location 55,864,898 - 55,866,025
singlet/doubletsinglet
Overlap genenone
Upstream geneGalnt13, LOC666936, Kcnj3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314I12.bB6Ng01-314I12.g
ACCGA105436GA105437
length1,121371
definitionB6Ng01-314I12.b B6Ng01-314I12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatatccatatgtcatttataaatgttcataattggtaaattaa
atacttatacatgaaaaattggtacataatagcatgaatatgattacatt
cgtaaataattttaatttgaggaatgattattttatttttaaaaattatc
ttcttagtaaataaaattgttacatttacttaatatattttgttgactaa
tatattacatatttgtactgtccagatttgtttcaaaggtaattttaaaa
cattaattcactaccgtctacatatccatttattagctaaccagaaatat
tattagaaaaatactttattcagaacttctcagaactaagactctctaga
taagtatttctatgaactgaagataaaaagggcatttcagaattttaatt
ttattttaaaattttatttaaacacataatttacataacacattgagcat
atgccatccacactctgaaatttttgcaactaaagttatttggtgtctgt
tagacccttagctgctaaattgacatttggtgttaaataaatcaatgtga
aaagaagatggaataatacaggtatagaatatgaatatagtctggccttc
tggtatgcctacagatacttgtctcaagagctttggaattccagcccaag
ctctaagacacctgtcactacactaagctttctttcatcaagctgattct
ctgatgctggtcatgcttctgatttgtcctcctggagtcgagctcttaat
cctctttatgcctcttagttgtcatttgggagatcagggtatggatggtt
gtctgaccagtaagttcatgacattgatgcagggactcttgaaaaggata
agacctttctataactattcatgtttggcacagattcctaaaggtgccag
acactcaacactcattaaagataaacttaagatagtgactggggttcatt
gtatcatgtcagtaaaactgatggtatgagctctcaggggaataatataa
agcagaggtattttttattagattacagaaggtataaattgagaaaaatc
aagaaaatgagatcaatagtgagaatagaaacgcttataagaaattgagc
cctcagttaacttcttgtcta

ctttgagtttctctccatttaattactgttggatataggtttacagtaaa
ctgctttatttgtgttttggcttgcccccagtatctctaatcatatcaag
gcattttttttttccagaaaggagtgttggattttaagtttttttctgca
tctaatagaaggatcatgtggcttttgtctgtctgtttgtttatatggta
gtttacagggtttgttttttggggggtttgggtttttgtttgttttttca
tgttagtttgtttgttttttgttttttatgttgaacgatttctgcatctc
tgagcgaagcctaattgacattggtggatgatctctttcacacattgctt
ttatttttttcttttatttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_55864898_55866025
seq2: B6Ng01-314I12.b_43_1163 (reverse)

seq1  TAGACAAAGGAGTTTAATGAGGGTTC-ATTTCTTATAAACCTTTCTATTC  49
      ||||| ||| |||| | |||||| || ||||||||||| | |||||||||
seq2  TAGAC-AAGAAGTTAACTGAGGGCTCAATTTCTTATAAGCGTTTCTATTC  49

seq1  TCACTATTTGATCTCATTTTTCTTTGATTTTTCTCAATTTATTACCTTTC  99
      |||||| |||||||||||||   |||||||||||||||||| |||| |||
seq2  TCACTA-TTGATCTCATTTT--CTTGATTTTTCTCAATTTA-TACC-TTC  94

seq1  TGTAATTCTTAATAAAAATTACTTCTGCTTTATA-TATTCCCCTTGAGAG  148
      ||||||   ||||||||| ||| ||||||||||| |||||||| ||||||
seq2  TGTAAT--CTAATAAAAAATACCTCTGCTTTATATTATTCCCC-TGAGAG  141

seq1  CTCATACCATCAGTTTTTACTGACATGATACAATGAACCCCAGTCACTAT  198
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTCATACCATCAG-TTTTACTGACATGATACAATGAACCCCAGTCACTAT  190

seq1  CTTAAGTTTATCTTTAATGAGTGTTGAGTGTCTGGCACC-TTAGGAATCT  247
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTAAGTTTATCTTTAATGAGTGTTGAGTGTCTGGCACCTTTAGGAATCT  240

seq1  GTGCCAAACATGAATAGTTATAGAAAGGTCTTATCCTTTTCAAGAGTCCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAAACATGAATAGTTATAGAAAGGTCTTATCCTTTTCAAGAGTCCC  290

seq1  TGCATCAATGTCATGAACTTACTGGTCAGACAACCATCCATACCCTGATC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCAATGTCATGAACTTACTGGTCAGACAACCATCCATACCCTGATC  340

seq1  TCCCAAATGACAACTAAGAGGCATAAAGAGGATTAAGAGCTCGACTCCAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAATGACAACTAAGAGGCATAAAGAGGATTAAGAGCTCGACTCCAG  390

seq1  GAGGACAAATCAGAAGCATGACCAGCATCAGAGAATCAGCTTGATGAAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACAAATCAGAAGCATGACCAGCATCAGAGAATCAGCTTGATGAAAG  440

seq1  AAAGCTTAGTGTAGTGACAGGTGTCTTAGAGCTTGGGCTGGAATTCCAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTAGTGTAGTGACAGGTGTCTTAGAGCTTGGGCTGGAATTCCAAA  490

seq1  GCTCTTGAGACAAGTATCTGTAGGCATACCAGAAGGCCAGACTATATTCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGAGACAAGTATCTGTAGGCATACCAGAAGGCCAGACTATATTCA  540

seq1  TATTCTATACCTGTATTATTCCATCTTCTTTTCACATTGATTTATTTAAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTATACCTGTATTATTCCATCTTCTTTTCACATTGATTTATTTAAC  590

seq1  ACCAAATGTCAATTTAGCAGCTAAGGGTCTAACAGACACCAAATAACTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATGTCAATTTAGCAGCTAAGGGTCTAACAGACACCAAATAACTTT  640

seq1  AGTTGCAAAAATTTCAGAGTGTGGATGGCATATGCTCAATGTGTTATGTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCAAAAATTTCAGAGTGTGGATGGCATATGCTCAATGTGTTATGTA  690

seq1  AATTATGTGTTTAAATAAAATTTTAAAATAAAATTAAAATTCTGAAATGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGTGTTTAAATAAAATTTTAAAATAAAATTAAAATTCTGAAATGC  740

seq1  CCTTTTTATCTTCAGTTCATAGAAATACTTATCTAGAGAGTCTTAGTTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTATCTTCAGTTCATAGAAATACTTATCTAGAGAGTCTTAGTTCT  790

seq1  GAGAAGTTCTGAATAAAGTATTTTTCTAATAATATTTCTGGTTAGCTAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTTCTGAATAAAGTATTTTTCTAATAATATTTCTGGTTAGCTAAT  840

seq1  AAATGGATATGTAGACGGTAGTGAATTAATGTTTTAAAATTACCTTTGAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGATATGTAGACGGTAGTGAATTAATGTTTTAAAATTACCTTTGAA  890

seq1  ACAAATCTGGACAGTACAAATATGTAATATATTAGTCAACAAAATATATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCTGGACAGTACAAATATGTAATATATTAGTCAACAAAATATATT  940

seq1  AAGTAAATGTAACAATTTTATTTACTAAGAAGATAATTTTTAAAAATAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATGTAACAATTTTATTTACTAAGAAGATAATTTTTAAAAATAAA  990

seq1  ATAATCATTCCTCAAATTAAAATTATTTACGAATGTAATCATATTCATGC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCATTCCTCAAATTAAAATTATTTACGAATGTAATCATATTCATGC  1040

seq1  TATTATGTACCAATTTTTCATGTATAAGTATTTAATTTACCAATTATGAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGTACCAATTTTTCATGTATAAGTATTTAATTTACCAATTATGAA  1090

seq1  CATTTATAAATGACATATGGATATGGAATTC  1128
      |||||||||||||||||||||||||||||||
seq2  CATTTATAAATGACATATGGATATGGAATTC  1121


| Home | SequenceCutter | Blast | Download |