BAC Information

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BAC

Clone NameB6Ng01-314J16
Chromosome2 (Build37)
Map Location 55,864,913 - 55,866,025
singlet/doubletsinglet
Overlap genenone
Upstream geneGalnt13, LOC666936, Kcnj3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314J16.bB6Ng01-314J16.g
ACCGA105486GA105487
length1,112233
definitionB6Ng01-314J16.b B6Ng01-314J16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatatccatatgtcatttataaatgttcataattggtaaattaa
atacttatacatgaaaaattggtacataatagcatgaatatgattacatt
cgtaaataattttaatttgaggaatgattattttatttttaaaaattatc
ttcttagtaaataaaattgttacatttacttaatatattttgttgactaa
tatattacatatttgtactgtccagatttgtttcaaaggtaattttaaaa
cattaattcactaccgtctacatatccatttattagctaaccagaaatat
tattagaaaaatactttattcagaacttctcagaactaagactctctaga
taagtatttctatgaactgaagataaaaagggcatttcagaattttaatt
ttattttaaaattttatttaaacacataatttacataacacattgagcat
atgccatccacactctgaaatttttgcaactaaagttatttggtgtctgt
tagacccttagctgctaaattgacatttggtgttaaataaatcaatgtga
aaagaagatggaataatacaggtatagaatatgaatatagtctggccttc
tggtatgcctacagatacttgtctcaagagctttggaattccagcccaag
ctctaagacacctgtcactacactaagctttctttcatcaagctgattct
ctgatgctggtcatgcttctgatttgtcctcctggagtcgagctcttaat
cctctttatgcctcttagttgtcatttgggagatcagggtatggatgggt
tgtctgaccagtaagttcatgacattgatgcagggactcttgaaaaggat
aagacctttctataactattcatgtttggcacagattcctaaaggtgcca
gacactcaacactcattaaagataaacttaagatagtgactggggttcat
tgtatcatgtcagtaaaaactgatggtatgagctctcaaggggaatatat
aaagcagaagtaatttttattagatttacagaaagggtaataaatgagaa
aaatcaaggaaaaatggagatcaatagttgagatagaaacgttataagaa
attgacctcatt

ctttgagtttctctccatttaattactgttggatataggtttacagtaaa
ctgctttatttgtgttttggcttgcccccagtatctctaatcatatcaag
gcattttttttttccagaaaggagtgttggattttaagtttttttctgca
tctaatagaaggatcatgtggcttttgtctgtctgtttgtttatatggta
gtttacagggtttgttttttggggggtttgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_55864913_55866025
seq2: B6Ng01-314J16.b_47_1158 (reverse)

seq1  AATGAGGGTTCATTTCTTATAAACCTTTCTATTCTC-ACTATTTGATCT-  48
      ||||| |||  ||||||||| ||| |||||| |||| |||| ||||||| 
seq2  AATGA-GGTCAATTTCTTAT-AACGTTTCTA-TCTCAACTA-TTGATCTC  46

seq1  CATTTTTCTTTGATTTTTCTCAATTTATTA-CCTTTCTGTAATTCTTAAT  97
      |||||||| |||||||||||| |||||||| ||||||||||| || ||||
seq2  CATTTTTCCTTGATTTTTCTC-ATTTATTACCCTTTCTGTAAATC-TAAT  94

seq1  AAAAATTACTTCTGCTTTATATATTCCCCTTGAGAGCTCATACCATCAGT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTACTTCTGCTTTATATATTCCCCTTGAGAGCTCATACCATCAGT  144

seq1  TTTTACTGACATGATACAATGAACCCCAGTCACTATCTTAAGTTTATCTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTGACATGATACAATGAACCCCAGTCACTATCTTAAGTTTATCTT  194

seq1  TAATGAGTGTTGAGTGTCTGGCACC-TTAGGAATCTGTGCCAAACATGAA  246
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAATGAGTGTTGAGTGTCTGGCACCTTTAGGAATCTGTGCCAAACATGAA  244

seq1  TAGTTATAGAAAGGTCTTATCCTTTTCAAGAGTCCCTGCATCAATGTCAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATAGAAAGGTCTTATCCTTTTCAAGAGTCCCTGCATCAATGTCAT  294

seq1  GAACTTACTGGTCAGACAA-CCATCCATACCCTGATCTCCCAAATGACAA  345
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAACTTACTGGTCAGACAACCCATCCATACCCTGATCTCCCAAATGACAA  344

seq1  CTAAGAGGCATAAAGAGGATTAAGAGCTCGACTCCAGGAGGACAAATCAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGGCATAAAGAGGATTAAGAGCTCGACTCCAGGAGGACAAATCAG  394

seq1  AAGCATGACCAGCATCAGAGAATCAGCTTGATGAAAGAAAGCTTAGTGTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGACCAGCATCAGAGAATCAGCTTGATGAAAGAAAGCTTAGTGTA  444

seq1  GTGACAGGTGTCTTAGAGCTTGGGCTGGAATTCCAAAGCTCTTGAGACAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGGTGTCTTAGAGCTTGGGCTGGAATTCCAAAGCTCTTGAGACAA  494

seq1  GTATCTGTAGGCATACCAGAAGGCCAGACTATATTCATATTCTATACCTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGTAGGCATACCAGAAGGCCAGACTATATTCATATTCTATACCTG  544

seq1  TATTATTCCATCTTCTTTTCACATTGATTTATTTAACACCAAATGTCAAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTCCATCTTCTTTTCACATTGATTTATTTAACACCAAATGTCAAT  594

seq1  TTAGCAGCTAAGGGTCTAACAGACACCAAATAACTTTAGTTGCAAAAATT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGCTAAGGGTCTAACAGACACCAAATAACTTTAGTTGCAAAAATT  644

seq1  TCAGAGTGTGGATGGCATATGCTCAATGTGTTATGTAAATTATGTGTTTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTGTGGATGGCATATGCTCAATGTGTTATGTAAATTATGTGTTTA  694

seq1  AATAAAATTTTAAAATAAAATTAAAATTCTGAAATGCCCTTTTTATCTTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATTTTAAAATAAAATTAAAATTCTGAAATGCCCTTTTTATCTTC  744

seq1  AGTTCATAGAAATACTTATCTAGAGAGTCTTAGTTCTGAGAAGTTCTGAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATAGAAATACTTATCTAGAGAGTCTTAGTTCTGAGAAGTTCTGAA  794

seq1  TAAAGTATTTTTCTAATAATATTTCTGGTTAGCTAATAAATGGATATGTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTATTTTTCTAATAATATTTCTGGTTAGCTAATAAATGGATATGTA  844

seq1  GACGGTAGTGAATTAATGTTTTAAAATTACCTTTGAAACAAATCTGGACA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGTAGTGAATTAATGTTTTAAAATTACCTTTGAAACAAATCTGGACA  894

seq1  GTACAAATATGTAATATATTAGTCAACAAAATATATTAAGTAAATGTAAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAATATGTAATATATTAGTCAACAAAATATATTAAGTAAATGTAAC  944

seq1  AATTTTATTTACTAAGAAGATAATTTTTAAAAATAAAATAATCATTCCTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATTTACTAAGAAGATAATTTTTAAAAATAAAATAATCATTCCTC  994

seq1  AAATTAAAATTATTTACGAATGTAATCATATTCATGCTATTATGTACCAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAAATTATTTACGAATGTAATCATATTCATGCTATTATGTACCAA  1044

seq1  TTTTTCATGTATAAGTATTTAATTTACCAATTATGAACATTTATAAATGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATGTATAAGTATTTAATTTACCAATTATGAACATTTATAAATGA  1094

seq1  CATATGGATATGGAATTC  1113
      ||||||||||||||||||
seq2  CATATGGATATGGAATTC  1112


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