BAC Information

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BAC

Clone NameB6Ng01-315H12
Chromosome2 (Build37)
Map Location 82,573,400 - 82,574,021
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp804a, LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292
Downstream geneLOC433440, Fsip2, LOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15, Itgav
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315H12.bB6Ng01-315H12.g
ACCGA106112GA106113
length1,1331,163
definitionB6Ng01-315H12.b B6Ng01-315H12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactgaggaatactgatggctgagaagcaccgaaagaaatgt
ttaatatccttggtaaccagggaaatgaaaattaaaacaaccctgagatt
ccacctcacaccagtcagaatgggtaagaccaaaaactcaggtgacagca
gatgctggcgaggatatggagaaagagaaacacttctccattgctagtag
gattgtaagctggtacaaccattctggaaatcagtttggtggttcctcag
aaaactggaccagctataccactcctaggcatatacccagaagatctcta
acatgtaatatggacacatgttccactatgttcacagcagccttattttt
aacagtcataagctggaaagaacccagatgtccctcaatagaggaatgga
cacagaaagtgtggtacatttacacagtgcagtactactcagctatcaaa
agcaatgaattcatgaaattcttaggcaagtggatggacctacaaaatat
catccggagtgaggtaacccagtcacaaaagaacacacatagtaagcatt
cactgataagtggatattagcccaaaaatctcagaatacccaagatacaa
ttcacagaccacagaaagctcaagaagaaggaagaccaaaatgtggatat
ttcagtccttcttagaagagggaacaaaaactttaatttttttaaggtcc
tgtagttattgccacccttccaggtctgcccacatacagttccttgtctc
attcttcttgccccctaactccaagaggatttcccagcccccattcaacc
cccttccagaactacctacaccctggggcctcatctctagagagttaggc
acatcttctcccactgagaacagatcaagcagtcaagggtcttggaccag
cttgaatatgctgcctagtttggtggctcagtgtctgagagatctcagtg
gccctgggttagttgaaactactggtcatcctatggggtgaatattaata
aagttactcattctgaaacacaagaataatttgaaataaatatttgaatt
ttatgttaataatcaatgggtgtgtaccacttaatactggaattgaatac
tggtttatgaagttttggctgtgaaagaacaca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaataatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccagatggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgcacactatgcccctccttagaaatgtgaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgctgggggcctagcaaa
cacagaagtggatgcctcacagtctgctaatgggatggatcacaggctcc
caatggaggagctagagaaagtaccaaagagcttaagggatctgctacct
atagtggatcaacatatgaactaccagtaccccggagctctgatctagct
gcaatatgtatcaaagatgacttagtcggccatcactggaaagaagaggc
caattgggaccgtactttaatgccctatacaggggtatcgcgagtccata
aaaggggggaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_82573400_82574021
seq2: B6Ng01-315H12.b_543_1181

seq1  AAATATCATCCGGAGTGAGGTAACCCAGTCACAAAAGAACACACATAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCATCCGGAGTGAGGTAACCCAGTCACAAAAGAACACACATAGTA  50

seq1  AGCATTCACTGATAAGTGGATATTAGCCCAAAAATCTCAGAATACCCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCACTGATAAGTGGATATTAGCCCAAAAATCTCAGAATACCCAAG  100

seq1  ATACAATTCACAGACCACAGAAAGCTCAAGAAGAAGGAAGACCAAAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATTCACAGACCACAGAAAGCTCAAGAAGAAGGAAGACCAAAATGT  150

seq1  GGATATTTCAGTCCTTCTTAGAAGAGGGAACAAAAACTTTAATTTTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTTCAGTCCTTCTTAGAAGAGGGAACAAAAACTTTAATTTTTTTA  200

seq1  AGGTCCTGTAGTTATTGCCACCCTTCCAGGTCTGCCCACATACAGTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTGTAGTTATTGCCACCCTTCCAGGTCTGCCCACATACAGTTCCT  250

seq1  TGTCTCATTCTTCTTGCCCCCTAACTCCAAGAGGATTTCCCAGCCCCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCATTCTTCTTGCCCCCTAACTCCAAGAGGATTTCCCAGCCCCCAT  300

seq1  TCAACCCCCTTCCAGAACTACCTACACCCTGGGGCCTCATCTCTAGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCCCTTCCAGAACTACCTACACCCTGGGGCCTCATCTCTAGAGAG  350

seq1  TTAGGCACATCTTCTCCCACTGAGAACAGATCAGGCAGTC-AGGGTCTTG  399
      ||||||||||||||||||||||||||||||||| |||||| |||||||||
seq2  TTAGGCACATCTTCTCCCACTGAGAACAGATCAAGCAGTCAAGGGTCTTG  400

seq1  GACCAGCTTGAATATGCTGCCTAG-TTGGTGGCTCAGTGTCTGAGAGATC  448
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GACCAGCTTGAATATGCTGCCTAGTTTGGTGGCTCAGTGTCTGAGAGATC  450

seq1  TCAGTGG-CCTGGGTTAGTTGAAACTACTGGTCATCCTATGGGGTG-ATA  496
      ||||||| |||||||||||||||||||||||||||||||||||||| |||
seq2  TCAGTGGCCCTGGGTTAGTTGAAACTACTGGTCATCCTATGGGGTGAATA  500

seq1  TTAATAAAGTTACTCATTCTG-AACAC-AGA--TATTTGAA--TAATATT  540
      ||||||||||||||||||||| ||||| |||   |||||||   ||||||
seq2  TTAATAAAGTTACTCATTCTGAAACACAAGAATAATTTGAAATAAATATT  550

seq1  TG-ATTTTATGTT-ATTATC-ATGGGTGTGTACCACTT-ATACTGAATTT  586
      || |||||||||| || ||| ||||||||||||||||| |||||| | ||
seq2  TGAATTTTATGTTAATAATCAATGGGTGTGTACCACTTAATACTGGAATT  600

seq1  GGATACTTGTTTATG-AGTTTT-GCTGTGAAAG-ACACA  622
      | ||||| ||||||| |||||| |||||||||| |||||
seq2  GAATACTGGTTTATGAAGTTTTGGCTGTGAAAGAACACA  639