MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-315H13
Chromosome	13 (Build37)	2 (Build37)
Map Location	43,052,432 - 43,052,884	129,056,974 - 129,057,123
singlet/doublet	singlet	singlet
Overlap gene	Phactr1
Upstream gene	LOC100039272, Hivep1, Edn1, Hn1-ps4
Downstream gene	Tbc1d7, Gfod1, Sirt5, Nol7, Ranbp9, LOC637627, Ccdc90a, Rnf182, LOC100039403, Cd83, LOC100039432
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039272 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039272
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 57 Proteins

name	Hivep1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110521 MGI:96100
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Edn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13614 MGI:95283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hn1-ps4 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606512
definition	note : hematological and neurological expressed 1 pseudogene 4 pseudo : _no_value

name	Phactr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218194 MGI:2659021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Tbc1d7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67046 MGI:1914296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gfod1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328232 MGI:2145304
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sirt5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68346 MGI:1915596
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nol7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70078 MGI:1917328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ranbp9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56705 MGI:1928741
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC637627 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:637627
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Ccdc90a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76137 MGI:1923387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf182 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328234 MGI:3045355
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039403 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039403
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Cd83 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12522 MGI:1328316
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039432 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039432
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100039272 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264190 GeneID:100039272
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 57 Proteins product : similar to CG2839-PA transcript_id : XM_001472592.1

name	Hivep1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117938311 GeneID:110521 MGI:96100
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : human immunodeficiency virus type I enhancer binding protein 1 transcript_id : NM_007772.2

name	Edn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981794 GeneID:13614 MGI:95283
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : endothelin 1 transcript_id : NM_010104.2

name	Phactr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54144632 GeneID:218194 MGI:2659021
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatase and actin regulator 1 transcript_id : NM_198419.3

name	Phactr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54144634 GeneID:218194 MGI:2659021
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatase and actin regulator 1 transcript_id : NM_001005740.1

name	Phactr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93204886 GeneID:218194 MGI:2659021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatase and actin regulator 1 transcript_id : NM_001005748.2

name	Tbc1d7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803204 GeneID:67046 MGI:1914296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TBC1 domain family, member 7 transcript_id : NM_025935.2

name	Gfod1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376093 GeneID:328232 MGI:2145304
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucose-fructose oxidoreductase domain containing 1 transcript_id : NM_001033399.2

name	Sirt5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130585 GeneID:68346 MGI:1915596
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sirtuin 5 (silent mating type information regulation 2 homolog) 5 (S. cerevisiae) transcript_id : NM_178848.3

name	Nol7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117647256 GeneID:70078 MGI:1917328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleolar protein 7 transcript_id : NM_023554.2

name	Ranbp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9910285 GeneID:56705 MGI:1928741
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAN binding protein 9 transcript_id : NM_019930.1

name	Ccdc90a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486695 GeneID:76137 MGI:1923387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 90A transcript_id : NM_001081059.1

name	Rnf182 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345088 GeneID:328234 MGI:3045355
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 182 transcript_id : NM_183204.2

name	Cd83 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753355 GeneID:12522 MGI:1328316
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD83 antigen transcript_id : NM_009856.1

name	LOC100039432 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264192 GeneID:100039432
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100039432 transcript_id : XM_001473065.1

name	LOC100039272 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264191 GeneID:100039272
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472642.1

name	Hivep1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117938312 GeneID:110521 MGI:96100
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : alphaA-CRYBP1; crystallin, alpha binding protein 1; HIV type I enhancer binding protein 1; human immunodeficiency virus type I enhancer-binding protein 1 product : human immunodeficiency virus type I enhancer binding protein 1 protein_id : NP_031798.2

name	Edn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753720 CCDS:CCDS26474.1 GeneID:13614 MGI:95283
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0031707 - endothelin A receptor binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0005102 - receptor binding [Evidence IDA] GO_process : GO:0008217 - blood pressure regulation [Evidence IMP]; GO:0048514 - blood vessel morphogenesis [Evidence IMP]; GO:0051216 - cartilage development [Evidence IMP]; GO:0030146 - diuresis [Evidence IMP] [Evidence IGI]; GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0051482 - elevation of cytosolic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) [Evidence IDA]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0007589 - fluid secretion [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0031583 - G-protein signaling, phospholipase D activating pathway [Evidence IDA]; GO:0015758 - glucose transport [Evidence IDA]; GO:0007507 - heart development [Evidence IMP]; GO:0042474 - middle ear morphogenesis [Evidence IMP]; GO:0030147 - natriuresis [Evidence IMP]; GO:0030818 - negative regulation of cAMP biosynthesis [Evidence IGI] [Evidence IDA]; GO:0014032 - neural crest cell development [Evidence IMP]; GO:0009405 - pathogenesis [Evidence IEA]; GO:0001569 - patterning of blood vessels [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IDA]; GO:0045987 - positive regulation of smooth muscle contraction [Evidence IDA]; GO:0007205 - protein kinase C activation [Evidence IDA]; GO:0050880 - regulation of blood vessel size [Evidence IEA]; GO:0006885 - regulation of pH [Evidence IDA]; GO:0019229 - regulation of vasoconstriction [Evidence IEA]; GO:0007585 - respiratory gaseous exchange [Evidence IMP]; GO:0001666 - response to hypoxia [Evidence IMP]; GO:0043179 - rhythmic excitation [Evidence IMP]; GO:0001501 - skeletal development [Evidence IMP]; GO:0042310 - vasoconstriction [Evidence IEA] codon_start : 1 note : preproendothelin product : endothelin 1 protein_id : NP_034234.1

name	Phactr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54144633 CCDS:CCDS26475.1 GeneID:218194 MGI:2659021
definition	GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0004864 - protein phosphatase inhibitor activity [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; RPEL repeat containing 1 product : phosphatase and actin regulator 1 isoform 1 protein_id : NP_940811.2

name	Phactr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54144635 GeneID:218194 MGI:2659021
definition	GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0004864 - protein phosphatase inhibitor activity [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; RPEL repeat containing 1 product : phosphatase and actin regulator 1 isoform 2 protein_id : NP_001005740.1

name	Phactr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54144637 GeneID:218194 MGI:2659021
definition	GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0004864 - protein phosphatase inhibitor activity [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; RPEL repeat containing 1 product : phosphatase and actin regulator 1 isoform 3 protein_id : NP_001005748.1

name	Tbc1d7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313148 CCDS:CCDS26476.1 GeneID:67046 MGI:1914296
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] codon_start : 1 product : TBC1 domain family, member 7 protein_id : NP_080211.1

name	Gfod1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701893 CCDS:CCDS26477.1 GeneID:328232 MGI:2145304
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : glucose-fructose oxidoreductase domain containing 1 protein_id : NP_001028571.1

name	Sirt5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30578432 CCDS:CCDS26478.1 GeneID:68346 MGI:1915596
definition	GO_component : GO:0005677 - chromatin silencing complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006342 - chromatin silencing [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : sirtuin 5 (silent mating type information regulation 2 homolog) 5 protein_id : NP_849179.1

name	Nol7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117647257 GeneID:70078 MGI:1917328
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : nucleolar protein 7 protein_id : NP_076043.2

name	Ranbp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910286 GeneID:56705 MGI:1928741
definition	GO_component : GO:0005813 - centrosome [Evidence ISS]; GO:0000785 - chromatin [Evidence IEA]; GO:0005737 - cytoplasm [Evidence IDA] [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008536 - Ran GTPase binding [Evidence ISS] codon_start : 1 note : B cell antigen receptor Ig beta associated protein 1 product : RAN binding protein 9 protein_id : NP_064314.1

name	Ccdc90a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486696 GeneID:76137 MGI:1923387
definition	codon_start : 1 product : coiled-coil domain containing 90A protein_id : NP_001074528.1

name	Rnf182 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34147266 CCDS:CCDS26480.1 GeneID:328234 MGI:3045355
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : ring finger protein 182 protein_id : NP_899027.1

name	Cd83 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753356 CCDS:CCDS26481.1 GeneID:12522 MGI:1328316
definition	GO_component : GO:0005886 - plasma membrane [Evidence IEA] codon_start : 1 product : CD83 antigen protein_id : NP_033986.1

name	LOC100039432 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264193 GeneID:100039432
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473115.1

name	LOC637627 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:637627
definition	number : 1 pseudo : _no_value

name	LOC100039403 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039403
definition	number : 1 pseudo : _no_value

clone name	MSMg01-328N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532I16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-488E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363N15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-274O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097N07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-315H13.b	B6Ng01-315H13.g
ACC	GA106114	GA106115
length	447	303
definition	B6Ng01-315H13.b	B6Ng01-315H13.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(43,052,432 - 43,052,884)	(129,056,974 - 129,057,123)
sequence	caccttttctataattgaatactttcattcagcccagactaccgtttctt attagtcacctcgtttttcactgccctagtgaaagtcaacacacagcaga aaaaaaaaatgacttaggtacggttgttggtggataagatcaggttattt cacggaggaagagacaaggcagaaaagcaaagactggaagtgaatcccca ctgcattgtgaagttaaccatgcgtttcctaactctgcagccaactggga aatgttgggggagatcaacttaacctggagcagaactgcctgggttcaag tcctggttctggtattttctggctctaggagcttgcttagtttatttacc tctacctcagttttctcatcattaaaacaggagggtaagtgtcagtacct tacgtgaatttttacctgtggagacttgattagcaacatgaagatgt	ctttctttgtttcctagcttccacgagcagaggagctttgattttccatg tgcttccgatcatgatgcactgactgccatgtgtgctgcctttccacaga gccgtaggcccctgagccacttgagcactttgaaaactctaaacgtgtgt gtcaaagcaaatatacatatatacatatatacatatgcacatatatgtat acatacatgtatacgtatatatgtatatatatacatatatgtgtgtatat atgtgtgtgtgtgtgtgtatatatgtatatatgtatatgtattgatatat ata
quality values	Open. Hide. 41 32 54 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 43 62 62 59 49 59 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 56 59 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 54 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 51 62 59 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 62 49 47 62 62 62 62 62 62 62 62 62 62 62 54 52 52 62 46 52 54 62 62 52 62 62 62 62 62 62 62 62 48 52 38 46 52 54 58 58 58 58 47 45 40 52 54 58 54 58 54 54 52 52 54 54 58 52 58 58 58 58 54 54 54 11 14	Open. Hide. 54 62 62 62 62 62 43 54 54 56 59 59 62 62 62 62 62 62 62 62 62 59 49 59 62 62 62 59 62 62 62 54 49 54 62 62 62 62 62 62 59 59 62 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 54 54 62 59 59 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 59 62 62 59 59 62 62 62 59 62 62 62 59 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 18 31 18 27 24 24 23 13 18 24 12 13 27 13 18 13 13 26 13 17 24 13 19 21 14 13 9 6 9 8 11 12 11 12 11 16 13 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr13_43052432_43052884
seq2: B6Ng01-315H13.b_47_499

seq1  GAATTCCACCTTTTCTATAATTGAATACTTTCATTCAGCCCAGACTACCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTTTTCTATAATTGAATACTTTCATTCAGCCCAGACTACCG  50

seq1  TTTCTTATTAGTCACCTCGTTTTTCACTGCCCTAGTGAAAGTCAACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATTAGTCACCTCGTTTTTCACTGCCCTAGTGAAAGTCAACACAC  100

seq1  AGCAGAAAAAAAAAATGACTTAGGTACGGTTGTTGGTGGATAAGATCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAAAAAAAAATGACTTAGGTACGGTTGTTGGTGGATAAGATCAGG  150

seq1  TTATTTCACGGAGGAAGAGACAAGGCAGAAAAGCAAAGACTGGAAGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCACGGAGGAAGAGACAAGGCAGAAAAGCAAAGACTGGAAGTGAA  200

seq1  TCCCCACTGCATTGTGAAGTTAACCATGCGTTTCCTAACTCTGCAGCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACTGCATTGTGAAGTTAACCATGCGTTTCCTAACTCTGCAGCCAA  250

seq1  CTGGGAAATGTTGGGGGAGATCAACTTAACCTGGAGCAGAACTGCCTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAATGTTGGGGGAGATCAACTTAACCTGGAGCAGAACTGCCTGGG  300

seq1  TTCAAGTCCTGGTTCTGGTATTTTCTGGCTCTAGGAGCTTGCTTAGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTCCTGGTTCTGGTATTTTCTGGCTCTAGGAGCTTGCTTAGTTTA  350

seq1  TTTACCTCTACCTCAGTTTTCTCATCATTAAAACAGGAGGGTAAGTGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTCTACCTCAGTTTTCTCATCATTAAAACAGGAGGGTAAGTGTCA  400

seq1  GTACCTTACGTGAATTTTTACCTGTGGAGACTTGATTAGCAACATGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTTACGTGAATTTTTACCTGTGGAGACTTGATTAGCAACATGAAGA  450

seq1  TGT  453
      |||
seq2  TGT  453

seq1: chr2_129056974_129057123
seq2: B6Ng01-315H13.g_231_372 (reverse)

seq1  TATATATATGTATACATATATATATTTGTATATAT------GTGTGTGTA  44
      |||||||||  ||||||||| |||| |  ||||||              |
seq2  TATATATATCAATACATATACATATATACATATATACACACACACACACA  50

seq1  TATGTATATATATGTGTGTGTATGTATACACACATATGCATACGTATATA  94
       || |||| | |  | | ||||| |||| ||| ||    ||||||||| |
seq2  CATATATACACACATATATGTATATATATACATAT----ATACGTATACA  96

seq1  TGTGTGTATATATATGTATACATATATATTTGTATATATGTGTGTATATA  144
      ||| |||||| |||| | | ||||      ||||||||    ||||||||
seq2  TGTATGTATACATATATGTGCATA------TGTATATA----TGTATATA  136

seq1  TGTATA  150
      ||||||
seq2  TGTATA  142

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information