BAC Information

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BAC

Clone NameB6Ng01-318F16
Chromosome2 (Build37)
Map Location 22,675,174 - 22,676,292
singlet/doubletsinglet
Overlap geneApbb1ip
Upstream geneGpr158, LOC637235, Myo3a, LOC100041703, Myo3a, Gad2
Downstream genePdss1, Abi1, 1200016E24Rik, Acbd5, Mastl, Yme1l1, 4931423N10Rik, LOC664835, Nxph2, LOC664822, 4921517N04Rik, LOC100039149, Sh3d2c-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318F16.bB6Ng01-318F16.g
ACCGA108268GA108269
length1,1191,145
definitionB6Ng01-318F16.b B6Ng01-318F16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcactaccatggaagtgattatttcaagattcatcatcatttca
atgatcatcagattagttctctgcaataaattgaaaagaagatcttgcta
taaagtaaagatttaatctccagaggattgaaagtttcaaacagtaaatt
atatacagatacatgattgtaatttaaaatacatatttagaataaaatgt
atttggaatcagttcccattcatacacgatcaattgttattaaacactta
atttttatccttgaagagtcatttcttactgactccttagtaataagaaa
gttcctttttatagtatataatatttttattcattgtttgagaatttcat
acacgtgtacagtgaattttgaacatattcacaccccactccccccctcc
accccctcttcatgtaatcttggattcttttattgttgttgtttttattt
tttatttttattagatattttctttatttacatttcaaatgttatcccct
ttcctagtttcccctccaaaatccctctatgccctgccccttccccctgc
tcaccaaccaacccactcccacttcctggccctggcatttccctatactg
gggcatagaaccttcacaggaccaaagacctctcctcccattgatgaccg
actaggccatcctctgctacatatgcagctagagccatgtgatttctttg
gttggtggcttaatgtcggggagctctgggggtactggttagttcatatt
gctgttcctcctatggggctgcagaccccttcagctcctcaggccctttc
tctcgctccctcattggggaccctgtgctctgtccaataagtttatcttg
agacttttcataaatggaagcgggtcttctctttcatcataggtgaaaat
atctaattgactttattaattaaatgtagacacagtaaaggacaatgcac
cgtccagggtttacacactgtttcccatgaaagtccacgtttccttgggt
ttcatggtcagactcagtccgtggagaccccatcactgcttatggtgtta
gagttcttaagaaaaccacgtttctgtgcttacatttaattcttcaaccc
aacagtgtagttaactctt
gaattctcttggtagatttttccttggatgaatatgaagtgtcctttatt
atcttatttgataactttaggttgagagtcgattttattcaatattagaa
tggcgacttgtttcttgggacaatttgcttggaaaattgttttccagctt
tttactctaaggttattcgtgtgaaatactttcttgtgaattgttggtca
gagatgccctagtagtttccaaataatacaggatcttttcattcttctcc
cttgcccacaaaactagttgataaaaaccctcttgctgaagactctgcac
actgtggttccagaatatagaaaaatcaagttgtaactgaattgaaactt
tcatagctttcatagtgccaaaacgtttctatacaggttgttgggggaca
aaagtctctaacagtcttacctacatttgaactacaataccaatcttcca
ggcaaaatgtgccaactgatgcaagagtggtacagatgccatagagataa
ccatctgctctctagttagattcctggcttgatctgtggaggaattttaa
aatactgtaagcccagttggaaacccatgactgagaaggtcttaagtcct
aggggtgatcttactactgctgtttggctaaactatcatggtgctaagct
gttgtttaaatatttgtgtttatacctgtaattaaatgttactcatatag
ctacagaagcctacttgcagtgaacagtgtgaattcagggatgcacagac
gagtagaaccaaaagggaaatttataccaccccttctaaaggctcgagga
tcatcatataggagggagcagagagtatgtaaaccagaaaatagcaagaa
agcctgtgagatgctgtcttctgggcgtgatccacccaatatagtcatga
catcatagcagctgtggctctaataagccttcacaaagtggggctcccaa
ataaccatggatcagtaaggcactcatagaaccctacctctccccaaatt
ggatgttgataaatgctggagaaggggcagtcacccactagctgtgttat
acattgaggagttcctctgttaagctcagtgttacttcaaaaccaacaat
cttaaccgaacacacaaaccgaaatctacaacttctagtgaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_22675174_22676292
seq2: B6Ng01-318F16.b_47_1165 (reverse)

seq1  AAGAGTTTAACTACACTGTGGGGTTTAAGGATTTAAATGGTAAGCACAGA  50
      ||||| ||||||||||||| ||||| || || |||||| |||||||||||
seq2  AAGAG-TTAACTACACTGTTGGGTTGAA-GAATTAAAT-GTAAGCACAGA  47

seq1  AACGTG--TTTCTTAAGAACTCTAACACCAT-AGCAGTGATGGGGGTCTC  97
      ||||||  ||||||||||||||||||||||| ||||||||| ||||||||
seq2  AACGTGGTTTTCTTAAGAACTCTAACACCATAAGCAGTGAT-GGGGTCTC  96

seq1  CACGGGACTGAGTCTGACCATGAAA-CCAAGGAAACGTGGAC-TTCATGG  145
      ||| ||||||||||||||||||||| |||||||||||||||| |||||||
seq2  CAC-GGACTGAGTCTGACCATGAAACCCAAGGAAACGTGGACTTTCATGG  145

seq1  GAAACAGTGTGTAAACCCTGGACGGTGCATTGTCCTTTACTGTGTCTACA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGTGTGTAAACCCTGGACGGTGCATTGTCCTTTACTGTGTCTACA  195

seq1  TTTAATTAATAAAGTCAATTAGATATTTTCACCTATGATGAAAGAGAAGA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTAATAAAGTCAATTAGATATTTTCACCTATGATGAAAGAGAAGA  245

seq1  CCCGCTTCCATTTATGAAAAGTCTCAAGATAAACTTATTGGACAGAGCAC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCTTCCATTTATGAAAAGTCTCAAGATAAACTTATTGGACAGAGCAC  295

seq1  AGGGTCCCCAATGAGGGAGCGAGAGAAAGGGCCTGAGGAGCTGAAGGGGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCCCAATGAGGGAGCGAGAGAAAGGGCCTGAGGAGCTGAAGGGGT  345

seq1  CTGCAGCCCCATAGGAGGAACAGCAATATGAACTAACCAGTACCCCCAGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCCCCATAGGAGGAACAGCAATATGAACTAACCAGTACCCCCAGA  395

seq1  GCTCCCCGACATTAAGCCACCAACCAAAGAAATCACATGGCTCTAGCTGC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCGACATTAAGCCACCAACCAAAGAAATCACATGGCTCTAGCTGC  445

seq1  ATATGTAGCAGAGGATGGCCTAGTCGGTCATCAATGGGAGGAGAGGTCTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAGCAGAGGATGGCCTAGTCGGTCATCAATGGGAGGAGAGGTCTT  495

seq1  TGGTCCTGTGAAGGTTCTATGCCCCAGTATAGGGAAATGCCAGGGCCAGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTGTGAAGGTTCTATGCCCCAGTATAGGGAAATGCCAGGGCCAGG  545

seq1  AAGTGGGAGTGGGTTGGTTGGTGAGCAGGGGGAAGGGGCAGGGCATAGAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGAGTGGGTTGGTTGGTGAGCAGGGGGAAGGGGCAGGGCATAGAG  595

seq1  GGATTTTGGAGGGGAAACTAGGAAAGGGGATAACATTTGAAATGTAAATA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTGGAGGGGAAACTAGGAAAGGGGATAACATTTGAAATGTAAATA  645

seq1  AAGAAAATATCTAATAAAAATAAAAAATAAAAACAACAACAATAAAAGAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATATCTAATAAAAATAAAAAATAAAAACAACAACAATAAAAGAA  695

seq1  TCCAAGATTACATGAAGAGGGGGTGGAGGGGGGGAGTGGGGTGTGAATAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGATTACATGAAGAGGGGGTGGAGGGGGGGAGTGGGGTGTGAATAT  745

seq1  GTTCAAAATTCACTGTACACGTGTATGAAATTCTCAAACAATGAATAAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAAATTCACTGTACACGTGTATGAAATTCTCAAACAATGAATAAAA  795

seq1  ATATTATATACTATAAAAAGGAACTTTCTTATTACTAAGGAGTCAGTAAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATATACTATAAAAAGGAACTTTCTTATTACTAAGGAGTCAGTAAG  845

seq1  AAATGACTCTTCAAGGATAAAAATTAAGTGTTTAATAACAATTGATCGTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACTCTTCAAGGATAAAAATTAAGTGTTTAATAACAATTGATCGTG  895

seq1  TATGAATGGGAACTGATTCCAAATACATTTTATTCTAAATATGTATTTTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATGGGAACTGATTCCAAATACATTTTATTCTAAATATGTATTTTA  945

seq1  AATTACAATCATGTATCTGTATATAATTTACTGTTTGAAACTTTCAATCC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAATCATGTATCTGTATATAATTTACTGTTTGAAACTTTCAATCC  995

seq1  TCTGGAGATTAAATCTTTACTTTATAGCAAGATCTTCTTTTCAATTTATT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGATTAAATCTTTACTTTATAGCAAGATCTTCTTTTCAATTTATT  1045

seq1  GCAGAGAACTAATCTGATGATCATTGAAATGATGATGAATCTTGAAATAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAACTAATCTGATGATCATTGAAATGATGATGAATCTTGAAATAA  1095

seq1  TCACTTCCATGGTAGTGAGAATTC  1119
      ||||||||||||||||||||||||
seq2  TCACTTCCATGGTAGTGAGAATTC  1119