BAC Information

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BAC

Clone NameB6Ng01-318N19
Chromosome2 (Build37)
Map Location 138,305,490 - 138,306,498
singlet/doubletsinglet
Overlap genenone
Upstream geneBtbd3
Downstream geneLOC628103
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318N19.bB6Ng01-318N19.g
ACCGA108643GA108644
length1,1751,019
definitionB6Ng01-318N19.b B6Ng01-318N19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctacacggaaacctgactaatggaaaatacagggctggggag
acggctcagtggttaagagcactgactgctcttctggaggtcctgagttc
caaccccagaaaccacatggtggctcacaaccatctataataagatctga
tgcccttttctggtatgtctgaagacagctacagtgtacttatatataat
aaataaataaatcatttaactttttattagatttttttatttacatttca
aatgttaccccctgaaaaccctctaccccctccacctccccctgctcacc
aatccacccactttcccttcctggccctggcattcccctatactgggtca
tagaaccttcacaggaccaagggcctctcctcccattgatgacttactag
gccaacctctgctacatatgcagctggagccatgagtccaaccatgtgtt
ttctttggttggtggtttagtcccagggagctctggggtataggttaatt
catattgttgttcctcctatggggctgcacaccccttcagctccttggac
actttctctagctcctccattggggaccctgtgcaccctccaatggatgg
ctgtgagcatccatttctgtatttgtcaggcactggcagagcctctcagg
cagctttatcgggccatttttttttttttaggaaaatactaagtattatt
ttcttcatttattactataagacttttctacttattccttcattgcccag
tctaccacaccactaaatatgttccttagtatcctggaaaataaagacag
atagagctcttattcaggtcttagcttaccagaaaccaaagtctcttcag
tatggaagccataagccccctgtagttcctacttgatatgtggatgggtt
gaaactaagatgtaatgcatcaaatccacaatgggacttgggaaaatttt
taaatatctttatgtagatccgattgttgagtgatagaatttttgatgag
tggggtttacgtaaaatattaataaatgttgccacttgcaggtcgtgttt
ctaagggcctgctgctaacattgcctcttcaggaaacctttaaaccagac
agacatcccatctcagtagttctaagatactagtctgagcaggcttcaga
ccaattctacatcctctctatgaag
gaattcagaatgtttcagatcttttacactgcaccaatatttttcttcca
ttagacaaatgccatttcccttagtagcaatttagtcattaccccataat
ataaaagaagtgtgaaatccgtcacaaggaagatgatgttgtgacacaaa
gaaagatcctctgggaggtttaaccaggttttctacaagattgaaatgaa
tgtgacattatgttcatattcataattaaatttattcctttttaatgtgt
gtgaatgtgtgctcatcgagatgaagaaaatgagaaaatttggcctgact
gtagattgaggacagaccaatcttaaccttaaatatagcaccttaaatgt
gtgggccatgttgtaatttcagtttcaggcactcgatgtgatgctgtaaa
gtatagatgtgacttttggcttgggctaataatagatagctaatggactc
ccccaggagaattgtaattacctttaaatgcctttcatctgtgctgagca
tgagcaagagaactgctctccttggccccttgctgatgtgcctttagttt
cagagtaatgatgacagaagtaagcccctaagaaatatttgttgaagctg
gaaatagaaatagaaatggatgtgatagaaagaagaccaagagtagagat
gaaaatagagaaaagaaaaaggggaagttgaagaatagaagagggaaggg
aagagggggggcgaaggaagaagtctgagaacaggacactagagggtcag
tgtggctaaataactcctacactactcagcaaaactcgccatcaaacaaa
caaaacaatgcagacaagtaagtattttgagctattgagtagttgggaag
aaaagtaatgggataggagtctatgtaaatgtagaaaccgcagtgtagtt
attttcctgtcattatctctcaaagaactgttttcagtgccttggttcta
ccaattctaaggccttaccaaggatggaagagaaaagaaacatatggata
atatttgagctggtcatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_138305490_138306498
seq2: B6Ng01-318N19.g_69_1087

seq1  GAATTCAGAATGTTTCAGATCTTTTACACTGCACCAATATTTTTCTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAATGTTTCAGATCTTTTACACTGCACCAATATTTTTCTTCCA  50

seq1  TTAGACAAATGCCATTTCCCTTAGTAGCAATTTAGTCATTACCCCATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACAAATGCCATTTCCCTTAGTAGCAATTTAGTCATTACCCCATAAT  100

seq1  ATAAAAGAAGTGTGAAATCCGTCACAAGGAAGATGATGTTGTGACACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGAAGTGTGAAATCCGTCACAAGGAAGATGATGTTGTGACACAAA  150

seq1  GAAAGATCCTCTGGGAGGTTTAACCAGGTTTTCTACAAGATTGAAATGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATCCTCTGGGAGGTTTAACCAGGTTTTCTACAAGATTGAAATGAA  200

seq1  TGTGACATTATGTTCATATTCATAATTAAATTTATTCCTTTTTAATGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACATTATGTTCATATTCATAATTAAATTTATTCCTTTTTAATGTGT  250

seq1  GTGAATGTGTGCTCATTGAGATGAAGAAAATGAGAAAATTTGGCCTGACT  300
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTGAATGTGTGCTCATCGAGATGAAGAAAATGAGAAAATTTGGCCTGACT  300

seq1  GTAGATTGAGGACAGACCAATCTTAACCTTAAATATAGCACCTTAAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTGAGGACAGACCAATCTTAACCTTAAATATAGCACCTTAAATGT  350

seq1  GTGGGCCATGTTGTAATTTCAGTTTCAGGCACTCGATGTGATGCTGTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCCATGTTGTAATTTCAGTTTCAGGCACTCGATGTGATGCTGTAAA  400

seq1  GTATAGATGTGACTTTTGGCTTGGGCTAATAATAGATAGCTAATGGACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGATGTGACTTTTGGCTTGGGCTAATAATAGATAGCTAATGGACTC  450

seq1  CCCCAGGAGAATTGTAATTACCTTTAAATGCCTTTCATCTGTGCTGAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGAGAATTGTAATTACCTTTAAATGCCTTTCATCTGTGCTGAGCA  500

seq1  TGAGCAAGAGAACTGCTCTCCTTGGCCCCTTGCTGATGTGCCTTTAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAGAGAACTGCTCTCCTTGGCCCCTTGCTGATGTGCCTTTAGTTT  550

seq1  CAGAGTAATGATGACAGAAGTAAGCCCCTAAGAAATATTTGTTGAAGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTAATGATGACAGAAGTAAGCCCCTAAGAAATATTTGTTGAAGCTG  600

seq1  GAAATAGAAATAGAAATGGATGTGATAGAAAGAAGACCAAGAGTAGAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGAAATAGAAATGGATGTGATAGAAAGAAGACCAAGAGTAGAGAT  650

seq1  GAAAATAGAGAAAAGAAAAAGGGGAAGTTGAAGAATAGAAGAGGGAAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAGAGAAAAGAAAAAGGGGAAGTTGAAGAATAGAAGAGGGAAGGG  700

seq1  AAGAGGGGGGGCGAAGGAAGAAGTCTGAGAACAGGACACTAGAGGGTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGGGGGCGAAGGAAGAAGTCTGAGAACAGGACACTAGAGGGTCAG  750

seq1  TGTGGCTAAATAACTCCTACACTACTCAGCAAAACTCGCCATCAAACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTAAATAACTCCTACACTACTCAGCAAAACTCGCCATCAAACAAA  800

seq1  CAAAACAATGCAGACAAGTAAGTATTTTGAGCTATTGAGTAGTTGGGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAATGCAGACAAGTAAGTATTTTGAGCTATTGAGTAGTTGGGAAG  850

seq1  -AAAGTAATGGATTAGGAGTCTATGTAAAATGTAGAAAACCGCAGTGTAG  899
       ||||||||||  ||||||||||||| |||||||| ||||||||||||||
seq2  AAAAGTAATGGGATAGGAGTCTATGT-AAATGTAG-AAACCGCAGTGTAG  898

seq1  -TAATTTCCTGTCATTATCTCTCAAAG-ACTG-TTTCTGTGCCTT-GTTC  945
       || ||||||||||||||||||||||| |||| |||| ||||||| ||||
seq2  TTATTTTCCTGTCATTATCTCTCAAAGAACTGTTTTCAGTGCCTTGGTTC  948

seq1  TA-CAATTCTAAGCCTTAACCAGGGATG--AGAGAAAATAACTAT---GA  989
      || |||||||||| | | |||| |||||  |||||||| ||  ||   ||
seq2  TACCAATTCTAAGGCCTTACCAAGGATGGAAGAGAAAAGAAACATATGGA  998

seq1  TAATATTT-ATCTGGTCATAT  1009
      |||||||| | ||||||||||
seq2  TAATATTTGAGCTGGTCATAT  1019