BAC Information

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BAC

Clone NameB6Ng01-321M23
Chromosome2 (Build37)
Map Location 78,441,004 - 78,442,170
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp533, BC003993, LOC667920, OTTMUSG00000016703, LOC383717, LOC100040476
Downstream geneLOC100040494, 4930401B11Rik, Ube2e3, LOC100040526, Itga4, Cerkl, Neurod1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321M23.bB6Ng01-321M23.g
ACCGA110821GA110822
length1,1591,174
definitionB6Ng01-321M23.b B6Ng01-321M23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacaccaactagaattgaaacccgacttctcatctgtttttcat
gctaatgtctctctttacgaatgcatttgaatatgtaattttaaaaattt
ttaaattatgcacaagactaagctgtgtgctttacatatcttcccagtta
ttttcatttcataaagttggcatatgtgtgaatatagaactgaaaattga
cagaatgggtgcatttttttttcatgtgaagaagaacaaggcttagagga
aggcagaaggaagagatgaggacttgccactagctgctttcctacttgta
attttctgccttatctgcaaaggtgaggcagctttctttcattggtcaga
atggacaatggacattcactctgaaatctcattgtttggacacaacagaa
gcttcttatatacccagtgtgacatggaactctacttcctatggaggata
agggctccaaattggtagcaaccttaacaatgttaatcaaacttgtgtta
tatgggataataatatgtggtctgttttcttttttcaagtgaagaaagta
catagagactttattgtgcccccacacagatgcatgtgcatacatacatg
tacacacacgtgaacacacatatatacatgatacttaattcctcagctca
ggacacattcaattattctgcccaactgtaggacattgtgagatgacatt
tgggtactagagttgagagaggagccatgggttgatgaacgaagccactg
atcgcataggtttggccaatagatgaaatctttgtgctgattagagtctc
gctttcctttctctttctagtttctaattccacctccaccctgtcttctt
aaaacagtcaagacaacagatattaacttctgggacaggaactgtctctg
attatctaagtattagctttttctggggtcctcagatctgatttccaaga
gatagaagaaaccaaacactagacctagaattaaccatgtgggaaagact
ggagttataaggggagggagatggacagaggttggcaagcagaagaagaa
cattttctgcatttcatcattgcatgaataaaatagtgagcaccatatac
ttattactttccatgtacatttcttaagataacgttaagtttctctcttc
acattactc

gaattctttgttcagttctgagccccatttttaaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttgacactttctaacctccacatggctaatccacctctctccgatattcc
taagttattagttactaaaatctatattctgtctttgctgccctggaccc
agtcttggggctgttcttccatggttcctacatggcagttatgttctctg
tccttgctaccccttcacatcttctttaggcatggcaggtcttcttccat
cctctctgacccaagtccaggaatcctaaaagtcctgcctgtctaaactg
cccagccctcagctgccaacaactttacttaccaatcaaaatcaactgga
gacagggtcctcggtgtcctacatgtggattcttgtgcaatttggaggcc
caaattagcataatataagcagaattagaccaaacccactacaatgggtt
atggcccctttgggagtcatataacagatatgatccacacctgatatttg
cattacataaattacatttatgaagtaacaatgaaatgattttatggttg
gaggtcaccacacatgaggaactgtgttatggggtcacagcattaggaag
cttgagaactactgcatttaatagtataccagaaaaaaatttaaagttga
ttaagatgagaactttctaaataaataacagttagtattatcagcttgga
atgggatgttgaactagtttaatgtaatttgagacagagttgtttaatat
tgcatagccaatgaaacataatccttgttttgttttttctttttccccaa
gggaaagatttgcatttctactactaaaaactgtatatttagcatttttc
agagtagagttctagtcatagtagtacaccaaaaatataggcccatagac
tagggcttctgagtgtgtcagtgagtgccagaaaacacggaggaccgacc
aatccttatttctttcactaattcattgccattacaaaaatttatatgaa
aaccaagggtccttttagaaaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_78441004_78442170
seq2: B6Ng01-321M23.b_46_1204

seq1  GAATTCAACACCAACTAGAATTGAAACCCGACTTCTCATCTGTTTTTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACACCAACTAGAATTGAAACCCGACTTCTCATCTGTTTTTCAT  50

seq1  GCTAATGTCTCTCTTTACGAATGCATTTGAATATGTAATTTTAAAAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGTCTCTCTTTACGAATGCATTTGAATATGTAATTTTAAAAATTT  100

seq1  TTAAATTATGCACAAGACTAAGCTGTGTGCTTTACATATCTTCCCAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTATGCACAAGACTAAGCTGTGTGCTTTACATATCTTCCCAGTTA  150

seq1  TTTTCATTTCATAAAGTTGGCATATGTGTGAATATAGAACTGAAAATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTTCATAAAGTTGGCATATGTGTGAATATAGAACTGAAAATTGA  200

seq1  CAGAATGGGTGCATTTTTTTTTCATGTGAAGAAGAACAAGGCTTAGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGGGTGCATTTTTTTTTCATGTGAAGAAGAACAAGGCTTAGAGGA  250

seq1  AGGCAGAAGGAAGAGATGAGGACTTGCCACTAGCTGCTTTCCTACTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAAGGAAGAGATGAGGACTTGCCACTAGCTGCTTTCCTACTTGTA  300

seq1  ATTTTCTGCCTTATCTGCAAAGGTGAGGCAGCTTTCTTTCATTGGTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTGCCTTATCTGCAAAGGTGAGGCAGCTTTCTTTCATTGGTCAGA  350

seq1  ATGGACAATGGACATTCACTCTGAAATCTCATTGTTTGGACACAACAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAATGGACATTCACTCTGAAATCTCATTGTTTGGACACAACAGAA  400

seq1  GCTTCTTATATACCCAGTGTGACATGGAACTCTACTTCCTATGGAGGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTATATACCCAGTGTGACATGGAACTCTACTTCCTATGGAGGATA  450

seq1  AGGGCTCCAAATTGGTAGCAACCTTAACAATGTTAATCAAACTTGTGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCCAAATTGGTAGCAACCTTAACAATGTTAATCAAACTTGTGTTA  500

seq1  TATGGGATAATAATATGTGGTCTGTTTTCTTTTTTCAAGTGAAGAAAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGATAATAATATGTGGTCTGTTTTCTTTTTTCAAGTGAAGAAAGTA  550

seq1  CATAGAGACTTTATTGTGCCCCCACACAGATGCATGTGCATACATACATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGACTTTATTGTGCCCCCACACAGATGCATGTGCATACATACATG  600

seq1  TACACACACGTGAACACACATATATACATGATACTTAATTCCTCAGCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACACGTGAACACACATATATACATGATACTTAATTCCTCAGCTCA  650

seq1  GGACACATTCAATTATTCTGCCCAACTGTAGGACATTGTGAGATGACATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACATTCAATTATTCTGCCCAACTGTAGGACATTGTGAGATGACATT  700

seq1  TGGGTACTAGAGTTGAGAGAGGAGCCATGGGTTGATGAACGAAGCCACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACTAGAGTTGAGAGAGGAGCCATGGGTTGATGAACGAAGCCACTG  750

seq1  ATCGCATAGGTTTGGCCAATAGATGAAATCTTTGTGCTGATTAGAGTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCATAGGTTTGGCCAATAGATGAAATCTTTGTGCTGATTAGAGTCTC  800

seq1  GCTTTCCTTTCTCTTTCTAGTTTCTAATTCCACCTCCACCCTGTCTTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCTTTCTCTTTCTAGTTTCTAATTCCACCTCCACCCTGTCTTCTT  850

seq1  AAAACAGTCAAGACAACAGATATTAACTTCTGGGACAGGAACTGTCTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGTCAAGACAACAGATATTAACTTCTGGGACAGGAACTGTCTCTG  900

seq1  ATTATCTAAGTATTAGC-TTTTCTGGGGTCCTCAGATCTGATTTCCAAGA  949
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATTATCTAAGTATTAGCTTTTTCTGGGGTCCTCAGATCTGATTTCCAAGA  950

seq1  GATAGAAGGAAACCAAACACTAGACCTAGAATTAAACCATGTGGGAAAGA  999
      ||||||| ||||||||||||||||||||||||| ||||||||||||||||
seq2  GATAGAA-GAAACCAAACACTAGACCTAGAATT-AACCATGTGGGAAAGA  998

seq1  CTGGGAGTTAATAAGGGGAGGGAGATGGACAGAGGTTTGGCAAGCAGAAG  1049
      || |||||| ||||||||||||||||||||||||| ||||||||||||||
seq2  CT-GGAGTT-ATAAGGGGAGGGAGATGGACAGAGG-TTGGCAAGCAGAAG  1045

seq1  A--GACA-TTTCTGCATTTCATCATTTGCATGAATAAAAATAGTGAGCAC  1096
      |   ||| |||||||||||||||| |||||||||| ||||||||||||||
seq2  AAGAACATTTTCTGCATTTCATCA-TTGCATGAAT-AAAATAGTGAGCAC  1093

seq1  CATATTACTTTATTACTTTCCATGTACATTTCTTTAGGATAACGTTTAAA  1146
      |||| ||| ||||||||||||||||||||||| ||| ||||||| |||| 
seq2  CATA-TAC-TTATTACTTTCCATGTACATTTC-TTAAGATAACG-TTAAG  1139

seq1  TGTCTCTCTTCACCATTACTC  1167
      | |||||||||| ||||||||
seq2  TTTCTCTCTTCA-CATTACTC  1159


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