BAC Information

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BAC

Clone NameB6Ng01-322E22
Chromosome2 (Build37)
Map Location 15,921,621 - 16,095,385
singlet/doubletdoublet
Overlap genenone
Upstream geneNsun6, Arl5b, LOC633061, LOC667329, LOC227588, LOC625457
Downstream genePlxdc2, 4930515L03Rik, LOC383665
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322E22.bB6Ng01-322E22.g
ACCGA111180GA111181
length1,0501,177
definitionB6Ng01-322E22.b B6Ng01-322E22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,921,621 - 15,922,603)(16,094,207 - 16,095,385)
sequence
gaattcaaaagattggagttggcccagctgtttttcagtctagctttggt
ccagtatttctaaactgtgctcccctcctgatgttttggaagagtaacgt
gctatgatatgatgaaagaatgtgttttgctttttgattttgaaatttca
gcaattgcatgaacttcagaagagactatgaactttggagttttatacat
ttttgagattgtgatagaccatttttaaacattgttaagattgtgatagg
ggaccattacagttggactaaatgtattttccattatgttgtggctataa
acctatggggattagggagtggaatatggtggcttaaataggtctggccc
catagattcatgtgtttgaacacttagcacatagggagtgactattaaga
actgtggccttgttgtagtaggtgtggtgctggaagcaggctttgagaat
acacacattctctctctctctctctctctctctctctctctctctctctt
cttccctttttccactcttctgccccatccctgcttaaaccatcagctca
caaaatgcacccccaataccaatattcatatatatcacatttgttctatt
ttcccctctcattatatgatttacttgatttcatgatcatcaaatcccca
agtttagtttcttcaagcacatttcattttggttggcagttgccatgccc
ctttcattcttctatatccatcatcctcgatcctcatccttgaaactttt
ctgtctcaatattttttgtttctacttccattttcatctctatttctgca
tttccccatttctaaaaagtatcccttcaccaaaatcccatgtatagttt
cttagatccacaaattaaacacacaaaggaaaagtttcaagttagaaaga
gagaaacatgccacattttgtattttggacgactggtgactttcttgaga
gtttttgtcctttttttctctattttttttctcacctaataaactctgaa
tacattttccatccctagctgtaccatctacacattttctttttaatcca


gaattctatgccaaggcaaaccatagagggcatggtggagcaacagaagg
gagctctttcctgagacagcaggagaggcatatcagaatatagttcctac
aagggatgaattcactttcgggagcttaggctgaagccagtgggaaataa
gcttatcttcctttgacctctgaaccctaccagcatgccccacagcctga
atctcattagaagccaaagggccaggggcctgtcaatataggtcagaagc
atcagcagtctagctgcagactgtggggattcaaagctagagagataggc
ataagaaggaagagattatatgcctttggaagggaacagaacacgtggca
attctgtacattaataaattaacttttattttaaatagtctatcattcaa
tttaatctattagtgggtaaagtgggaggctaaagttagaagctacaaag
agtgttgatttttttcttatttatgtttgaattaataacttctcatttaa
tgcatgaaaaaaatagattggttagtcaaataattaactctgggtaactg
caagtatactatccacagtataatttatgtatgcttaaataatttttatt
ttattcaaattactagttcgttgatagatagctcttttctggcatcaagg
aaaataccaaggaactctaaaagcaaagtgaatatttatctgcttatgag
gagtgataagagagcaacattcaaaaaggtacacaactactacaatgatt
aagtcatgctataagtcagtttaacaaggatgtgaagacaggaatttatc
tatagttctgggaaacattgtggcccatgaacctctgtgatctgaccttg
aaaataatgctcatttccctcacaccttctctctaatccagtggttctaa
acccatggtatactaccaccttggtgttgcatataagatatactgcatat
cagattcatagcagtagcaaatttacagttatgaggcacaacataataat
gtgtgtgtgcgtgtgtgtgcgtgtgtgcctatgtatgcatgtctgaatat
ttcacgtgtcaagttgacaggtgtggtcagaataacaggtaaattcctat
ttttaaaggttattttttctcctgtcacctctatgaaggattccaatact
ttccttccctttccttttgcctctagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_15921621_15922603
seq2: B6Ng01-322E22.b_100_1095

seq1  TATTTCTAAACTGTGCTCCCCTCCTGATGTTTTGGAAGAGTAACGTGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTAAACTGTGCTCCCCTCCTGATGTTTTGGAAGAGTAACGTGCTA  50

seq1  TGATATGATGAAAGAATGTGTTTTGCTTTTTGATTTTGAAATTTCAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGATGAAAGAATGTGTTTTGCTTTTTGATTTTGAAATTTCAGCAA  100

seq1  TTGCATGAACTTCAGAAGAGACTATGAACTTTGGAGTTTTATACATTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGAACTTCAGAAGAGACTATGAACTTTGGAGTTTTATACATTTTT  150

seq1  GAGATTGTGATAGACCATTTTTAAACATTGTTAAGATTGTGATAGGGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGTGATAGACCATTTTTAAACATTGTTAAGATTGTGATAGGGGAC  200

seq1  CATTACAGTTGGACTAAATGTATTTTCCATTATGTTGTGGCTATAAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAGTTGGACTAAATGTATTTTCCATTATGTTGTGGCTATAAACCT  250

seq1  ATGGGGATTAGGGAGTGGAATATGGTGGCTTAAATAGGTCTGGCCCCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGATTAGGGAGTGGAATATGGTGGCTTAAATAGGTCTGGCCCCATA  300

seq1  GATTCATGTGTTTGAACACTTAGCACATAGGGAGTGACTATTAAGAACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATGTGTTTGAACACTTAGCACATAGGGAGTGACTATTAAGAACTG  350

seq1  TGGCCTTGTTGTAGTAGGTGTGGTGCTGGAAGCAGGCTTTGAGAATACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTGTTGTAGTAGGTGTGGTGCTGGAAGCAGGCTTTGAGAATACAC  400

seq1  ACATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTC  450

seq1  CCTTTTTCCACTCTTCTGCCCCATCCCTGCTTAAACCATCAGCTCACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTCCACTCTTCTGCCCCATCCCTGCTTAAACCATCAGCTCACAAA  500

seq1  ATGCACCCCCAATACCAATATTCATATATATCACATTTGTTCTATTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACCCCCAATACCAATATTCATATATATCACATTTGTTCTATTTTCC  550

seq1  CCTCTCATTATATGATTTACTTGATTTCATGATCATC-AATCCCCAAG-T  598
      ||||||||||||||||||||||||||||||||||||| |||||||||| |
seq2  CCTCTCATTATATGATTTACTTGATTTCATGATCATCAAATCCCCAAGTT  600

seq1  TAG-TTCTTCAAGCACATTTCATTTTGGTTGGCAGTTGCCATGCCCC-TT  646
      ||| ||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAGTTTCTTCAAGCACATTTCATTTTGGTTGGCAGTTGCCATGCCCCTTT  650

seq1  CATTCTTCTATATCCATCATCCTCGATCCTCATCCTTGAAAC-TTTCTGT  695
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CATTCTTCTATATCCATCATCCTCGATCCTCATCCTTGAAACTTTTCTGT  700

seq1  CTCAATATTTTTTGTTTCTACTTCCA-TTTCATCTCTA-TTCTGCAATTC  743
      |||||||||||||||||||||||||| ||||||||||| ||||||| |||
seq2  CTCAATATTTTTTGTTTCTACTTCCATTTTCATCTCTATTTCTGCATTTC  750

seq1  CCCATTTCT-AAAAGTATCCC-TCACC-AAATCCCATGTATAGTTTCTTA  790
      ||||||||| ||||||||||| ||||| ||||||||||||||||||||||
seq2  CCCATTTCTAAAAAGTATCCCTTCACCAAAATCCCATGTATAGTTTCTTA  800

seq1  GATCCACAAATTAAACACACAAAGGAAAAGTTTTCAAGTTAGAAAGAGAG  840
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GATCCACAAATTAAACACACAAAGGAAAAG-TTTCAAGTTAGAAAGAGAG  849

seq1  -AACATGCCACA-TTTGTATTTTGGA-GACTGGTGACTTTC-TGAGAGTT  886
       ||||||||||| ||||||||||||| |||||||||||||| ||||||||
seq2  AAACATGCCACATTTTGTATTTTGGACGACTGGTGACTTTCTTGAGAGTT  899

seq1  TTTGTCCTTTTTTTCTCTATTTTTTTTTTCACCTAATAAAACTCTG-ATA  935
      ||||||||||||||||||||||||||| ||||||||| |||||||| |||
seq2  TTTGTCCTTTTTTTCTCTATTTTTTTTCTCACCTAAT-AAACTCTGAATA  948

seq1  CATTTTCCTTCCCTAGCTGTACCATCTACACATTTCTTTTTTAATCCA  983
      |||||||| ||||||||||||||||||||||||||  |||||||||||
seq2  CATTTTCCATCCCTAGCTGTACCATCTACACATTTTCTTTTTAATCCA  996


seq1: chr2_16094207_16095385
seq2: B6Ng01-322E22.g_65_1241 (reverse)

seq1  ACTAGAGCATAAGGGAAAGGGAAGGGAAAGTATATGAGAAATTCATTCAT  50
      |||||||   || |||||||||| ||||||||| || |||  || |||| 
seq2  ACTAGAGGCAAAAGGAAAGGGAA-GGAAAGTAT-TG-GAA--TCCTTCA-  44

seq1  TAGA-GTGACAGGAG-AAAAATAAACATTAAAAATAGGATATTAACTGTT  98
      |||| |||||||||| |||||||| | ||||||||||||  ||| |||||
seq2  TAGAGGTGACAGGAGAAAAAATAACCTTTAAAAATAGGAATTTACCTGTT  94

seq1  A-TCTGGACACA-CTGTCAACTTGACACGTGAAATA-TCAGACATGCATA  145
      | ||||  |||| ||||||||||||||||||||||| |||||||||||||
seq2  ATTCTGACCACACCTGTCAACTTGACACGTGAAATATTCAGACATGCATA  144

seq1  CATAGGCACACACGCACACACACGCACACACACATTATTATGTTGTGCCT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGCACACACGCACACACACGCACACACACATTATTATGTTGTGCCT  194

seq1  CATAACTGTAAATTTTGCTACTGCTATGAATCTGATATGCAGTATATCTT  245
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CATAACTGTAAA-TTTGCTACTGCTATGAATCTGATATGCAGTATATCTT  243

seq1  ATATGCAACACCAAGGTGGTAGTATACCATGGGTTTAGAACCACTGGATT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAACACCAAGGTGGTAGTATACCATGGGTTTAGAACCACTGGATT  293

seq1  AGAGAGAAGGTGTGAGGGAAATGAGCATTATTTTCAAGGTCAGATCACAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAGGTGTGAGGGAAATGAGCATTATTTTCAAGGTCAGATCACAG  343

seq1  AGGTTCATGGGCCACAATGTTTCCCAGAACTATAGATAAATTCCTGTCTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCATGGGCCACAATGTTTCCCAGAACTATAGATAAATTCCTGTCTT  393

seq1  CACATCCTTGTTAAACTGACTTATAGCATGACTTAATCATTGTAGTAGTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCTTGTTAAACTGACTTATAGCATGACTTAATCATTGTAGTAGTT  443

seq1  GTGTACCTTTTTGAATGTTGCTCTCTTATCACTCCTCATAAGCAGATAAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACCTTTTTGAATGTTGCTCTCTTATCACTCCTCATAAGCAGATAAA  493

seq1  TATTCACTTTGCTTTTAGAGTTCCTTGGTATTTTCCTTGATGCCAGAAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACTTTGCTTTTAGAGTTCCTTGGTATTTTCCTTGATGCCAGAAAA  543

seq1  GAGCTATCTATCAACGAACTAGTAATTTGAATAAAATAAAAATTATTTAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATCTATCAACGAACTAGTAATTTGAATAAAATAAAAATTATTTAA  593

seq1  GCATACATAAATTATACTGTGGATAGTATACTTGCAGTTACCCAGAGTTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACATAAATTATACTGTGGATAGTATACTTGCAGTTACCCAGAGTTA  643

seq1  ATTATTTGACTAACCAATCTATTTTTTTCATGCATTAAATGAGAAGTTAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGACTAACCAATCTATTTTTTTCATGCATTAAATGAGAAGTTAT  693

seq1  TAATTCAAACATAAATAAGAAAAAAATCAACACTCTTTGTAGCTTCTAAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCAAACATAAATAAGAAAAAAATCAACACTCTTTGTAGCTTCTAAC  743

seq1  TTTAGCCTCCCACTTTACCCACTAATAGATTAAATTGAATGATAGACTAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCCTCCCACTTTACCCACTAATAGATTAAATTGAATGATAGACTAT  793

seq1  TTAAAATAAAAGTTAATTTATTAATGTACAGAATTGCCACGTGTTCTGTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATAAAAGTTAATTTATTAATGTACAGAATTGCCACGTGTTCTGTT  843

seq1  CCCTTCCAAAGGCATATAATCTCTTCCTTCTTATGCCTATCTCTCTAGCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCAAAGGCATATAATCTCTTCCTTCTTATGCCTATCTCTCTAGCT  893

seq1  TTGAATCCCCACAGTCTGCAGCTAGACTGCTGATGCTTCTGACCTATATT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCCCCACAGTCTGCAGCTAGACTGCTGATGCTTCTGACCTATATT  943

seq1  GACAGGCCCCTGGCCCTTTGGCTTCTAATGAGATTCAGGCTGTGGGGCAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCCCCTGGCCCTTTGGCTTCTAATGAGATTCAGGCTGTGGGGCAT  993

seq1  GCTGGTAGGGTTCAGAGGTCAAAGGAAGATAAGCTTATTTCCCACTGGCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTAGGGTTCAGAGGTCAAAGGAAGATAAGCTTATTTCCCACTGGCT  1043

seq1  TCAGCCTAAGCTCCCGAAAGTGAATTCATCCCTTGTAGGAACTATATTCT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTAAGCTCCCGAAAGTGAATTCATCCCTTGTAGGAACTATATTCT  1093

seq1  GATATGCCTCTCCTGCTGTCTCAGGAAAGAGCTCCCTTCTGTTGCTCCAC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGCCTCTCCTGCTGTCTCAGGAAAGAGCTCCCTTCTGTTGCTCCAC  1143

seq1  CATGCCCTCTATGGTTTGCCTTGGCATAGAATTC  1179
      ||||||||||||||||||||||||||||||||||
seq2  CATGCCCTCTATGGTTTGCCTTGGCATAGAATTC  1177


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