BAC Information

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BAC

Clone NameB6Ng01-322N24
Chromosome2 (Build37)
Map Location 154,447,416 - 154,448,510
singlet/doubletsinglet
Overlap geneZfp341
Upstream geneCommd7, 7530422B04Rik, Dnmt3b, LOC668932, Mapre1, EG329541, LOC100043869, Spag4l, Bpil1, Bpil3, Rya3, LOC100043870, Gm1006, EG545477, Psp, LOC100043652, 1700058C13Rik, Plunc, 2310021H06Rik, U46068, BC018465, 5430413K10Rik, OTTMUSG00000015915, Cdk5rap1, Snta1, Cbfa2t2, Apba2bp, 1700003F12Rik, E2f1, Pxmp4
Downstream geneChmp4b, LOC668936, LOC435692, Raly, Eif2s2, a, Ahcy, Itch, LOC100043877, LOC668931, Dynlrb1, Map1lc3a, Cdc91l1, Trp53inp2, Ncoa6, LOC668938, Ggtl3, Acss2, Gss, Myh7b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322N24.b
ACCGA111603
length1,090
definitionB6Ng01-322N24.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagggatcgaacgtcagacctggcagctggcgcctttactcact
gagccctcttgctgacctcagaaacttccatttcttatatataatagcta
aagccaagttctgagtactctcaatttcttatgaggtaggacaattaccc
ctgttctgccaatgctgacactgaggctcagctgccaacctaggacaagc
tagaaactacaggaacaagaacctaaacattatggagacaggcaggcaga
tccctgtgagttcaaggccagcctcatctacataccaaggccagaccctg
tctccaaaaaacatatttttattataatttgaacccaggtgttatttctg
tgtgcctagagtgattcccacatactcagaaatgtttgtgactgtatggt
agagcacacccacaaaggcactcaggaggcagaagtaagagggccaggag
tctaaggccacatcatctttaaatagcaattttgaggtcagcctaggctt
tgtggacatggtctcaaaatattagagaaaaaagttacaaataaattaat
aaagactcatacgggactcccagagaagtcctttgctctctctaggtgcc
agaagcttaactcataaactggaataatctatgttctctcttcacagaag
ggaagctgagccatgacttccaaggcaaagcatcagggctcctggatatt
cgcaaatgatgatgcccaccacccacattggctaagcagtagacagagga
aggcatgagccagaaggttcagcaggaggaaggaagagaattcagacacc
agaggtcagtctgaggccacacaaggcagtccccttccatgccctgtgaa
cctcacacagtctgcatgcggagccacctgtcctctgctgatggacaggg
cagatactcacccagtggctggatggcaggtggcgcatttacactttgtc
ctgtggggtcagggactgctccttggccatccagtaggactgggacggca
gaaccgtttgattgtccatcctgaacaggaattgcagcctggtgagaaag
gggcccacctttcaccacttcacccttcctaggcagagca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_154447416_154448510
seq2: B6Ng01-322N24.b_47_1136 (reverse)

seq1  TGCTCTGGCTTGGGAGGGTGAAGTTGGGTGAAAGTTGGGCCCCCTTTCTC  50
      ||||||| || || ||||||||||  |||||||| |||| ||||||||||
seq2  TGCTCTGCCTAGGAAGGGTGAAGT--GGTGAAAGGTGGG-CCCCTTTCTC  47

seq1  A-CAGGCTGCATTTCCTGTTTCAGGAATGGACAATCAAACGGTTCTGGCC  99
      | ||||||||| |||||| |||||| |||||||||||||||||||| |||
seq2  ACCAGGCTGCAATTCCTG-TTCAGG-ATGGACAATCAAACGGTTCT-GCC  94

seq1  GT-CCAGTCCTTACTGGATGGCCAAGGAGCAGTCCCTGACCCCACAGGAC  148
      || ||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGTCC-TACTGGATGGCCAAGGAGCAGTCCCTGACCCCACAGGAC  143

seq1  AAAGTGTAAATGCGCCACCTGCCATCCAGCCACTGGGTGAGTATCTGCCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTAAATGCGCCACCTGCCATCCAGCCACTGGGTGAGTATCTGCCC  193

seq1  TGTCCATCAGCAGAGGACAGGTGGCTCCGCATGCAGACTGTGTGAGGTTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATCAGCAGAGGACAGGTGGCTCCGCATGCAGACTGTGTGAGGTTC  243

seq1  ACAGGGCATGGAAGGGGACTGCC-TGTGTGGCCTCAGACTGACCTCTGGT  297
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACAGGGCATGGAAGGGGACTGCCTTGTGTGGCCTCAGACTGACCTCTGGT  293

seq1  GTCTGAATTCTCTTCCTTCCTCCTGCCTGAACCTTCTGGCTCATGCCTTC  347
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GTCTGAATTCTCTTCCTTCCTCCTG-CTGAACCTTCTGGCTCATGCCTTC  342

seq1  CTCTGTCTACTGCTTAGCCAATGTGGGTGGTGGGCATCATCATTTGCGAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTACTGCTTAGCCAATGTGGGTGGTGGGCATCATCATTTGCGAA  392

seq1  TATCCAGGAGCCCTGATGCTTTGCCTTGGAAGTCATGGCTCAGCTTCCCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGGAGCCCTGATGCTTTGCCTTGGAAGTCATGGCTCAGCTTCCCT  442

seq1  TCTGTGAAGAGAGAACATAGATTATTCCAGTTTATGAGTTAAGCTTCTGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAAGAGAGAACATAGATTATTCCAGTTTATGAGTTAAGCTTCTGG  492

seq1  CACCTAGAGAGAGCAAAGGACTTCTCTGGGAGTCCCGTATGAGTCTTTAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAGAGAGAGCAAAGGACTTCTCTGGGAGTCCCGTATGAGTCTTTAT  542

seq1  TAATTTATTTGTAACTTTTTTCTCTAATATTTTGAGACCATGTCCACAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATTTGTAACTTTTTTCTCTAATATTTTGAGACCATGTCCACAAA  592

seq1  GCCTAGGCTGACCTCAAAATTGCTATTTAAAGATGATGTGGCCTTAGACT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGGCTGACCTCAAAATTGCTATTTAAAGATGATGTGGCCTTAGACT  642

seq1  CCTGGCCCTCTTACTTCTGCCTCCTGAGTGCCTTTGTGGGTGTGCTCTAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCCTCTTACTTCTGCCTCCTGAGTGCCTTTGTGGGTGTGCTCTAC  692

seq1  CATACAGTCACAAACATTTCTGAGTATGTGGGAATCACTCTAGGCACACA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGTCACAAACATTTCTGAGTATGTGGGAATCACTCTAGGCACACA  742

seq1  GAAATAACACCTGGGTTCAAATTATAATAAAAATATGTTTTTTGGAGACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAACACCTGGGTTCAAATTATAATAAAAATATGTTTTTTGGAGACA  792

seq1  GGGTCTGGCCTTGGTATGTAGATGAGGCTGGCCTTGAACTCACAGGGATC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTGGCCTTGGTATGTAGATGAGGCTGGCCTTGAACTCACAGGGATC  842

seq1  TGCCTGCCTGTCTCCATAATGTTTAGGTTCTTGTTCCTGTAGTTTCTAGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCTGTCTCCATAATGTTTAGGTTCTTGTTCCTGTAGTTTCTAGC  892

seq1  TTGTCCTAGGTTGGCAGCTGAGCCTCAGTGTCAGCATTGGCAGAACAGGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTAGGTTGGCAGCTGAGCCTCAGTGTCAGCATTGGCAGAACAGGG  942

seq1  GTAATTGTCCTACCTCATAAGAAATTGAGAGTACTCAGAACTTGGCTTTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGTCCTACCTCATAAGAAATTGAGAGTACTCAGAACTTGGCTTTA  992

seq1  GCTATTATATATAAGAAATGGAAGTTTCTGAGGTCAGCAAGAGGGCTCAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTATATATAAGAAATGGAAGTTTCTGAGGTCAGCAAGAGGGCTCAG  1042

seq1  TGAGTAAAGGCGCCAGCTGCCAGGTCTGACGTTCGATCCCTGGAATTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAAAGGCGCCAGCTGCCAGGTCTGACGTTCGATCCCTGGAATTC  1090