BAC Information

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BAC

Clone NameB6Ng01-326I06
Chromosome2 (Build37)
Map Location 47,499,655 - 47,592,286
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC383691, LOC100041457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326I06.bB6Ng01-326I06.g
ACCGA114307GA114308
length1,1771,086
definitionB6Ng01-326I06.b B6Ng01-326I06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,591,108 - 47,592,286)(47,499,655 - 47,500,750)
sequence
gaattctaacacattttgttgtttctctcacattggccttggcagtactt
gtccctggtattcagattcagtatctataagaagcattatgcttcattta
gctccagaagagaacagttcatagtattatctcagaagagttcaaaacaa
ataaacaaacaaacaacaagtaatggatgattctgtaaatcattaggttt
atattctgaagatttcactgcatagaaaatagaatttatttgtcatacta
gagaaatggttatgattattttatgctgaaataatcaagattgtacttat
ttttttaatattttagtgatttatctcacactttctataattttgaataa
ataactgatatggcaacttgaaatcaactcaaaagtgattatacttattt
aaagtggaaattcataaagaaataccactttctttaaaagaaacttcaaa
tcttgtgtttgggggaatgaaatcagatatgagacattagcaaaattcct
caggaattgtatgaactatacaaaactaaatgtcttgttttctggtaaca
cattacgacatcaccactgtgctggtatcagtacaaagaagatacagaga
gagctttaagaatatttgtgaatacgtggggcctttcaaaatgaaactcc
tttaggacattgtcacattggtagactataacactatggttcccttatga
aagaaactctccaccagagagtttcattttacaagtacagggtcaaagaa
atatttttactgattcaggctatttgttgaatccccccaccccaaaaaaa
tgtgttgaaagtaacaaattggtatgacatgtccagttaagaatctgctt
taagcagaaaccatgattttcaggacatgctatattttcattttattttt
gacaggaagtagtctttgttttgcagtcaggtgaacacctgtgtaatcct
taaacatttacagacttgtctttaaacctcagtggtacagtaaagatgta
atctatcaagagtttaaataatacacacatagccttaggtgccaattctt
cctactgcagtagaaaacctaacagtaagaatttctttgctgattttcca
catagccttacataagacttccagagcagggggagccaaataatgcctgg
aagatggcagtatacttattattgata

gaattctccaaaatagctaagacatgggacaatatgaaaattgtggcaca
ttacagaacacaaattgacacaaatagtgacaggcttggacttccattat
aagtacttaggaaacttgggattctcttttgccaaagtgcaatggtagca
gtgaccagctaccctctactctgacataacacctctgatggtaagtgcta
gttactaatctgatagtatcttgagataagcctccagatatacttctggg
gattaacatgattaggttagtctctgactataattgtgagactttttctt
gattacagtaatggaggtgggaaaataaatgttacaatgatggcagcacc
attctctgtcttagggcatgggaaacttaaaaattacaaagacctgggca
caagggttcatccttctcttctttctaaccaccaacacaatatgacaact
cattggcagttcctgcaagagtgtattttccaaatgtgagccagagtcga
cctgtattagtcagggtttccattgctgtgaagagacactatgaacaagg
caacccttttatttcattggggctggcttacagtttcagagattcagtcc
attatcatcacagtgggaatcataacactgtccaggcaaacaaggcactg
gataaggaattgagttttctgcaacttgactcaaaggcaagcaggagaga
ctgtcacttctgcactggacagagcttaagtgagaggccaagcctactcc
atcttgggaagaacatccatcataaaggaaaaaaaaaacctgagaacttg
acctgcagctgaacccaagttgccctcaagtgccaggaaggaccccaggg
cattgggccagagttggaaaaaatagaaaacaacacaataataataacat
tgtcccatttctacctttcatctcgaagattacttattttgggagattct
taatgttttgtagtatatgacgcacatacatgtaactatactcctatgat
ataaagttgtcataggcatgattatataacactcagtaactaaggcagag
gaagtagtttgcctttcactgattttagtagtattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_47591108_47592286
seq2: B6Ng01-326I06.b_48_1224 (reverse)

seq1  TATCATTAATAACCTATACTG-CATC-TCCA-GCATTATTTTGCTCCCCC  47
      ||||| ||||||  ||||||| |||| |||| ||||||||| ||| ||||
seq2  TATCAATAATAA-GTATACTGCCATCTTCCAGGCATTATTTGGCT-CCCC  48

seq1  CTGCTCTTGGAAGTCTTATGTAA-GCTATGT-GAAAATCAGCAAAGAAAT  95
      |||||| |||||||||||||||| ||||||| ||||||||||||||||||
seq2  CTGCTC-TGGAAGTCTTATGTAAGGCTATGTGGAAAATCAGCAAAGAAAT  97

seq1  TCTTACTGTTAGGTTTTCTACCTGCAGTAGGAAGAATTGGCACCTAAGGC  145
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCTTACTGTTAGGTTTTCTA-CTGCAGTAGGAAGAATTGGCACCTAAGGC  146

seq1  TATGTGTGTATTATTTAAACCTCCTTGATAGATTACATCTTTACTGTACC  195
      ||||||||||||||||||||   |||||||||||||||||||||||||||
seq2  TATGTGTGTATTATTTAAAC--TCTTGATAGATTACATCTTTACTGTACC  194

seq1  ACTGAGTTTTAAAGACAAGTCTGTAAATGTTTAAGGATTACACAGGTGTT  245
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGTTTAAAGACAAGTCTGTAAATGTTTAAGGATTACACAGGTGTT  244

seq1  CACCCTGACTGCAAAACAAAGACTACTTCCTGTCAAAAATAAAATGAAAA  295
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-CCTGACTGCAAAACAAAGACTACTTCCTGTCAAAAATAAAATGAAAA  293

seq1  TATAGCATGTCCTGAAAATCATGGTTTCTGCTTAAAGCAGATTCTTAACT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCATGTCCTGAAAATCATGGTTTCTGCTTAAAGCAGATTCTTAACT  343

seq1  GGACATGTCATACCAATTTGTTACTTTCAACACATTTTTTTGGGGTGGGG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGTCATACCAATTTGTTACTTTCAACACATTTTTTTGGGGTGGGG  393

seq1  GGATTCAACAAATAGCCTGAATCAGTAAAAATATTTCTTTGACCCTGTAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAACAAATAGCCTGAATCAGTAAAAATATTTCTTTGACCCTGTAC  443

seq1  TTGTAAAATGAAACTCTCTGGTGGAGAGTTTCTTTCATAAGGGAACCATA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAATGAAACTCTCTGGTGGAGAGTTTCTTTCATAAGGGAACCATA  493

seq1  GTGTTATAGTCTACCAATGTGACAATGTCCTAAAGGAGTTTCATTTTGAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTATAGTCTACCAATGTGACAATGTCCTAAAGGAGTTTCATTTTGAA  543

seq1  AGGCCCCACGTATTCACAAATATTCTTAAAGCTCTCTCTGTATCTTCTTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCCACGTATTCACAAATATTCTTAAAGCTCTCTCTGTATCTTCTTT  593

seq1  GTACTGATACCAGCACAGTGGTGATGTCGTAATGTGTTACCAGAAAACAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGATACCAGCACAGTGGTGATGTCGTAATGTGTTACCAGAAAACAA  643

seq1  GACATTTAGTTTTGTATAGTTCATACAATTCCTGAGGAATTTTGCTAATG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTAGTTTTGTATAGTTCATACAATTCCTGAGGAATTTTGCTAATG  693

seq1  TCTCATATCTGATTTCATTCCCCCAAACACAAGATTTGAAGTTTCTTTTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATATCTGATTTCATTCCCCCAAACACAAGATTTGAAGTTTCTTTTA  743

seq1  AAGAAAGTGGTATTTCTTTATGAATTTCCACTTTAAATAAGTATAATCAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGTGGTATTTCTTTATGAATTTCCACTTTAAATAAGTATAATCAC  793

seq1  TTTTGAGTTGATTTCAAGTTGCCATATCAGTTATTTATTCAAAATTATAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGTTGATTTCAAGTTGCCATATCAGTTATTTATTCAAAATTATAG  843

seq1  AAAGTGTGAGATAAATCACTAAAATATTAAAAAAATAAGTACAATCTTGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTGAGATAAATCACTAAAATATTAAAAAAATAAGTACAATCTTGA  893

seq1  TTATTTCAGCATAAAATAATCATAACCATTTCTCTAGTATGACAAATAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCAGCATAAAATAATCATAACCATTTCTCTAGTATGACAAATAAA  943

seq1  TTCTATTTTCTATGCAGTGAAATCTTCAGAATATAAACCTAATGATTTAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTTCTATGCAGTGAAATCTTCAGAATATAAACCTAATGATTTAC  993

seq1  AGAATCATCCATTACTTGTTGTTTGTTTGTTTATTTGTTTTGAACTCTTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCATCCATTACTTGTTGTTTGTTTGTTTATTTGTTTTGAACTCTTC  1043

seq1  TGAGATAATACTATGAACTGTTCTCTTCTGGAGCTAAATGAAGCATAATG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATAATACTATGAACTGTTCTCTTCTGGAGCTAAATGAAGCATAATG  1093

seq1  CTTCTTATAGATACTGAATCTGAATACCAGGGACAAGTACTGCCAAGGCC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTATAGATACTGAATCTGAATACCAGGGACAAGTACTGCCAAGGCC  1143

seq1  AATGTGAGAGAAACAACAAAATGTGTTAGAATTC  1179
      ||||||||||||||||||||||||||||||||||
seq2  AATGTGAGAGAAACAACAAAATGTGTTAGAATTC  1177


seq1: chr2_47499655_47500750
seq2: B6Ng01-326I06.g_65_1150

seq1  GAATTCTCCAAAATAGCTAAGACATGGGACAATATGAAAATTGTGGCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAAAATAGCTAAGACATGGGACAATATGAAAATTGTGGCACA  50

seq1  TTACAGAACACAAATTGACACAAATAGTGACAGGCTTGGACTTCCATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAACACAAATTGACACAAATAGTGACAGGCTTGGACTTCCATTAT  100

seq1  AAGTACTTAGGAAACTTGGGATTCTCTTTTGCCAAAGTGCAATGGTAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTTAGGAAACTTGGGATTCTCTTTTGCCAAAGTGCAATGGTAGCA  150

seq1  GTGACCAGCTACCCTCTACTCTGACATAACACCTCTGATGGTAAGTGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCAGCTACCCTCTACTCTGACATAACACCTCTGATGGTAAGTGCTA  200

seq1  GTTACTAATCTGATAGTATCTTGAGATAAGCCTCCAGATATACTTCTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTAATCTGATAGTATCTTGAGATAAGCCTCCAGATATACTTCTGGG  250

seq1  GATTAACATGATTAGGTTAGTCTCTGACTATAATTGTGAGACTTTTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAACATGATTAGGTTAGTCTCTGACTATAATTGTGAGACTTTTTCTT  300

seq1  GATTACAGTAATGGAGGTGGGAAAATAAATGTTACAATGATGGCAGCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACAGTAATGGAGGTGGGAAAATAAATGTTACAATGATGGCAGCACC  350

seq1  ATTCTCTGTCTTAGGGCATGGGAAACTTAAAAATTACAAAGACCTGGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTGTCTTAGGGCATGGGAAACTTAAAAATTACAAAGACCTGGGCA  400

seq1  CAAGGGTTCATCCTTCTCTTCTTTCTAACCACCAACACAATATGACAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTTCATCCTTCTCTTCTTTCTAACCACCAACACAATATGACAACT  450

seq1  CATTGGCAGTTCCTGCAAGAGTGTATTTTCCAAATGTGAGCCAGAGTCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGCAGTTCCTGCAAGAGTGTATTTTCCAAATGTGAGCCAGAGTCGA  500

seq1  CCTGTATTAGTCAGGGTTTCCATTGCTGTGAAGAGACACTATGAACAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATTAGTCAGGGTTTCCATTGCTGTGAAGAGACACTATGAACAAGG  550

seq1  CAACCCTTTTATTTCATTGGGGCTGGCTTACAGTTTCAGAGATTCAGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTTTTATTTCATTGGGGCTGGCTTACAGTTTCAGAGATTCAGTCC  600

seq1  ATTATCATCACAGTGGGAATCATAACACTGTCCAGGCAAACAAGGCACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCATCACAGTGGGAATCATAACACTGTCCAGGCAAACAAGGCACTG  650

seq1  GATAAGGAATTGAGTTTTCTGCAACTTGACTCAAAGGCAAGCAGGAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGGAATTGAGTTTTCTGCAACTTGACTCAAAGGCAAGCAGGAGAGA  700

seq1  CTGTCACTTCTGCACTGGACAGAGCTTAAGTGAGAGGCCAAGCCTACTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACTTCTGCACTGGACAGAGCTTAAGTGAGAGGCCAAGCCTACTCC  750

seq1  ATCTTGGGAAGAACATCCATCATAAAGGAAAAAAAAAACCTGAGAACTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGGAAGAACATCCATCATAAAGGAAAAAAAAAACCTGAGAACTTG  800

seq1  ACCTGCAGCTGAACCCAAGTTGCCCTCAAGTGCCAGGAAGGACCCCAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCAGCTGAACCCAAGTTGCCCTCAAGTGCCAGGAAGGACCCCAGGG  850

seq1  CATT-GGCCAGAGTTGGAAAAAATAGAAAACAACACAATAAATAATAACA  899
      |||| |||||||||||||||||||||||||||||||||| ||||||||||
seq2  CATTGGGCCAGAGTTGGAAAAAATAGAAAACAACACAAT-AATAATAACA  899

seq1  TTGTCCCA-TTCTACCTTTCATCTCGAAGATTACTTATTTTGGGAGATTC  948
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCCATTTCTACCTTTCATCTCGAAGATTACTTATTTTGGGAGATTC  949

seq1  TTAAATGTTTTGTAAGTATATGACGCACATAACATGTAACTATACTCCTA  998
      || |||||||||| |||||||||||||||| |||||||||||||||||||
seq2  TT-AATGTTTTGT-AGTATATGACGCACAT-ACATGTAACTATACTCCTA  996

seq1  TGATATAAAGTTGTCCATAGGCCATGATTATATTAACAACTCAAGTAAAC  1048
      |||||||||||||| |||||| |||||||||| |||| |||| ||| |||
seq2  TGATATAAAGTTGT-CATAGG-CATGATTATA-TAAC-ACTC-AGT-AAC  1040

seq1  TAAGGCAGAGGAAGTTAGTTTG-CTTTCACTGGAATTTTAGTAGTATTC  1096
      |||||||||||||| ||||||| |||||||||  |||||||||||||||
seq2  TAAGGCAGAGGAAG-TAGTTTGCCTTTCACTG--ATTTTAGTAGTATTC  1086


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