BAC Information

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BAC

Clone NameB6Ng01-329N21
Chromosome2 (Build37)
Map Location 62,746,114 - 62,853,143
singlet/doubletdoublet
Overlap geneKcnh7
Upstream geneLOC100039274, Slc4a10, Dpp4, Gcg, Fap, Ifih1, Gca
Downstream geneEG667257, Fign
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329N21.bB6Ng01-329N21.g
ACCGA116711GA116712
length9731,081
definitionB6Ng01-329N21.b B6Ng01-329N21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,746,114 - 62,746,956)(62,852,052 - 62,853,143)
sequence
gaattccatgaggtatgtctgaaattgcacagctacagaatttatgaatt
agagaagtaggcttggtataagcttggaagttcattttttctctggtgtt
tgcaactttttggtatgttgaatatgaggctttggtcttaggccaatctg
tgttgaaagttacctttggtgatttaagccaaagcattggcctaagggaa
aattgaaggaaaggaggctatgatttttatgggaaaaagcttgcttcaac
aggactgctgggcagttgcttggcatgttaaggagcaaggaactagaact
caaaagagtaatagaggacatgctagccttgactttgatcttctatgcag
ggtctggtggttttatttattttagaggtttaaagagaagccagacatcc
gcattttcatatgctattgccagatgtgttgacatcttggcaactcattc
agaattaaagacaaagagaagataagatccaacaattagagggctcagtg
gaagaactaagattccaagcttcgatcagaaataaccccattaaaaaatg
gggctcagagctgaacaaagaattctcacctgaggaataccgaatggctg
agaagcacctgaaaaaatgttcaacatccttaatcatcagggaaatgcaa
atcaaaacaaccctgagattccacttcactccagtcagaatggctaagat
aaaaaactcaggtaacagcagatgctggtgaggatgtggagatagaggaa
tactcctccattgctggtgggattgcaagcttgtacaaccactctggaaa
tcagtctggcggttcctcagaaattggacatagtactaccggaggatccc
gcaatacctctcctgggcatatatccagaggatgtcccaaccggtaagaa
ggacacatgctccactatgttcatagcagccttatttataatagccagaa
gctggaaagaacccagatgcctc

gaattcctttttgtagaggtcattgtgagtttataaaaacacactcattt
tggggacttttattttgggcttttatacaactttgctaattagttctaag
aaagtagaattttctttacagactagtctttgatttggatgcctttcata
tttttatattgcttgttttttctagataaaaatttcagaatgatactggt
cagaaatacccatcaatgacttgtcaagatagtgattccttatatattta
agataaaaatatagatctatattttcatatggcttagtttttctagaatc
aacatgctattcgctacaaggtatatccaacctggggcccagaatagcta
gaaatgtagctgaaaacaacaaataatattcagaacttgtttaaaataat
attaaaggttttagtttttcttctttttttgtttcatttttgttttactt
gttttattgcaaattcttattacattttgattgtatggttcttagctatg
aacattataggggaccatgccatttcacaaggtccaaagttgaacatcct
ggaaacaatacaattaaacaaataaatttcctttacttaatttatctctc
ctaaacaaacgaagcatctatgagaattaagcttgtcccttaacctccat
ttctgtaagtaaaattgaattgaatctctcattttttgtgagcatattag
aaacaataagtcccttgtcatcaggtgactcagtttctctgttctatgta
cagttatatctactgaaaaaatttaaaattgctactggtgtggatagaga
gttggctcagtggttacgaatgcgtgttgttcttgcagttctctataccc
acatggaatcctacaaccatatgtaactttatttccatgaaatccaattt
caatcttctgacctctgtaaacatcagcacacacgtggtacacaatatac
atagaggtaaatatactacatataaattaaaaataaaatttcaagtgcta
ctagactacatctatatcctatttgttgatatatgtatctaggctttata
aaattcatgtggttacatatagtacttttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_62746114_62746956
seq2: B6Ng01-329N21.b_44_885

seq1  GAATTCCATGAGGTATGTCTGAAATTGCACAGCTACAGAATTTATGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAGGTATGTCTGAAATTGCACAGCTACAGAATTTATGAATT  50

seq1  AGAGAAGTAGGCTTGGTATAAGCTTGGAAGTTCATTTTTTCTCTGGTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGTAGGCTTGGTATAAGCTTGGAAGTTCATTTTTTCTCTGGTGTT  100

seq1  TGCAACTTTTTGGTATGTTGAATATGAGGCTTTGGTCTTAGGCCAATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACTTTTTGGTATGTTGAATATGAGGCTTTGGTCTTAGGCCAATCTG  150

seq1  TGTTGAAAGTTACCTTTGGTGATTTAAGCCAAAGCATTGGCCTAAGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAAGTTACCTTTGGTGATTTAAGCCAAAGCATTGGCCTAAGGGAA  200

seq1  AATTGAAGGAAAGGAGGCTATGATTTTTATGGGAAAAAGCTTGCTTCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAGGAAAGGAGGCTATGATTTTTATGGGAAAAAGCTTGCTTCAAC  250

seq1  AGGACTGCTGGGCAGTTGCTTGGCATGTTAAGGAGCAAGGAACTAGAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGCTGGGCAGTTGCTTGGCATGTTAAGGAGCAAGGAACTAGAACT  300

seq1  CAAAAGAGTAATAGAGGACATGCTAGCCTTGACTTTGATCTTCTATGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAGTAATAGAGGACATGCTAGCCTTGACTTTGATCTTCTATGCAG  350

seq1  GGTCTGGTGGTTTTATTTATTTTAGAGGTTTAAAGAGAAGCCAGACATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGGTGGTTTTATTTATTTTAGAGGTTTAAAGAGAAGCCAGACATCC  400

seq1  GCATTTTCATATGCTATTGCCAGATGTGTTGACATCTTGGCAACTCATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTCATATGCTATTGCCAGATGTGTTGACATCTTGGCAACTCATTC  450

seq1  AGAATTAAAGACAAAGAGAAGATAAGATCCAACAATTAGAGGGCTCAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAAAGACAAAGAGAAGATAAGATCCAACAATTAGAGGGCTCAGTG  500

seq1  GAAGAACTAAGATTCCAAGCTTCGATCAGAAATAACCCCATTAAAAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACTAAGATTCCAAGCTTCGATCAGAAATAACCCCATTAAAAAATG  550

seq1  GGGCTCAGAGCTGAACAAAGAATTCTCACCTGAGGAATACCGAATGGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCAGAGCTGAACAAAGAATTCTCACCTGAGGAATACCGAATGGCTG  600

seq1  AGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAA  650

seq1  ATCAAAACAACCCTGAGATTCCACTTCACTCCAGTCAGAATGGCTAAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAACAACCCTGAGATTCCACTTCACTCCAGTCAGAATGGCTAAGAT  700

seq1  AAAAAACTCAGGTAACAGCAGATGCTGGTGAGGATGTGGAGATAGAGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTCAGGTAACAGCAGATGCTGGTGAGGATGTGGAGATAGAGGAA  750

seq1  TACTCCTCCATTGCTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCTCCATTGCTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAA  800

seq1  TCAGTCTGGCGGTTCCTCAGGAAATTGGACATAGTACTACCGG  843
      ||||||||||||||||||| |||||||||||||||||||||||
seq2  TCAGTCTGGCGGTTCCTCA-GAAATTGGACATAGTACTACCGG  842


seq1: chr2_62852052_62853143
seq2: B6Ng01-329N21.g_64_1144 (reverse)

seq1  TTAAAAGTACTATATGT-ACCACATGGATTTTATAAAGCTTAAGATACAT  49
      ||||||||||||||||| |||||||| |||||||||||| | ||||||||
seq2  TTAAAAGTACTATATGTAACCACATGAATTTTATAAAGCCT-AGATACAT  49

seq1  ATATCAAATTAAAATA-GATATTAAGAATGTAAGTCTAGTAGCACTTTGA  98
      |||||||    ||||| |||||  || |||| ||||||||||||| ||||
seq2  ATATCAA---CAAATAGGATAT--AG-ATGT-AGTCTAGTAGCAC-TTGA  91

seq1  AATTTTTATTTTTAATTTATATGTAGTTATATTTTACCTCTATGTATATT  148
      || ||||||||||||||||||||||| |||| |||||||||||||||| |
seq2  AA-TTTTATTTTTAATTTATATGTAG-TATA-TTTACCTCTATGTATA-T  137

seq1  TGTGTACCACGTGTGTGCCTGATGTTTACAGAGGTCAGAAGATTG-AATT  197
      ||||||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  TGTGTACCACGTGTGTG-CTGATGTTTACAGAGGTCAGAAGATTGAAATT  186

seq1  GGATTTCATGGAAATAAAGTTACATATGGTTGTAGGATTCCATGTGGGTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCATGGAAATAAAGTTACATATGGTTGTAGGATTCCATGTGGGTA  236

seq1  TAGAGAACTGCAAGAACAACACGCATTCGTAACCACTGAGCCAACTCTCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAACTGCAAGAACAACACGCATTCGTAACCACTGAGCCAACTCTCT  286

seq1  ATCCACACCAGTAGCAATTTTAAATTTTTTCAGTAGATATAACTGTACAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACACCAGTAGCAATTTTAAATTTTTTCAGTAGATATAACTGTACAT  336

seq1  AGAACAGAGAAACTGAGTCACCTGATGACAAGGGACTTATTGTTTCTAAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGAGAAACTGAGTCACCTGATGACAAGGGACTTATTGTTTCTAAT  386

seq1  ATGCTCACAAAAAATGAGAGATTCAATTCAATTTTACTTACAGAAATGGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCACAAAAAATGAGAGATTCAATTCAATTTTACTTACAGAAATGGA  436

seq1  GGTTAAGGGACAAGCTTAATTCTCATAGATGCTTCGTTTGTTTAGGAGAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAGGGACAAGCTTAATTCTCATAGATGCTTCGTTTGTTTAGGAGAG  486

seq1  ATAAATTAAGTAAAGGAAATTTATTTGTTTAATTGTATTGTTTCCAGGAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTAAGTAAAGGAAATTTATTTGTTTAATTGTATTGTTTCCAGGAT  536

seq1  GTTCAACTTTGGACCTTGTGAAATGGCATGGTCCCCTATAATGTTCATAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACTTTGGACCTTGTGAAATGGCATGGTCCCCTATAATGTTCATAG  586

seq1  CTAAGAACCATACAATCAAAATGTAATAAGAATTTGCAATAAAACAAGTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAACCATACAATCAAAATGTAATAAGAATTTGCAATAAAACAAGTA  636

seq1  AAACAAAAATGAAACAAAAAAAGAAGAAAAACTAAAACCTTTAATATTAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAATGAAACAAAAAAAGAAGAAAAACTAAAACCTTTAATATTAT  686

seq1  TTTAAACAAGTTCTGAATATTATTTGTTGTTTTCAGCTACATTTCTAGCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACAAGTTCTGAATATTATTTGTTGTTTTCAGCTACATTTCTAGCT  736

seq1  ATTCTGGGCCCCAGGTTGGATATACCTTGTAGCGAATAGCATGTTGATTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGGCCCCAGGTTGGATATACCTTGTAGCGAATAGCATGTTGATTC  786

seq1  TAGAAAAACTAAGCCATATGAAAATATAGATCTATATTTTTATCTTAAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAACTAAGCCATATGAAAATATAGATCTATATTTTTATCTTAAAT  836

seq1  ATATAAGGAATCACTATCTTGACAAGTCATTGATGGGTATTTCTGACCAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGGAATCACTATCTTGACAAGTCATTGATGGGTATTTCTGACCAG  886

seq1  TATCATTCTGAAATTTTTATCTAGAAAAAACAAGCAATATAAAAATATGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTCTGAAATTTTTATCTAGAAAAAACAAGCAATATAAAAATATGA  936

seq1  AAGGCATCCAAATCAAAGACTAGTCTGTAAAGAAAATTCTACTTTCTTAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATCCAAATCAAAGACTAGTCTGTAAAGAAAATTCTACTTTCTTAG  986

seq1  AACTAATTAGCAAAGTTGTATAAAAGCCCAAAATAAAAGTCCCCAAAATG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATTAGCAAAGTTGTATAAAAGCCCAAAATAAAAGTCCCCAAAATG  1036

seq1  AGTGTGTTTTTATAAACTCACAATGACCTCTACAAAAAGGAATTC  1092
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTTTTTATAAACTCACAATGACCTCTACAAAAAGGAATTC  1081


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