BAC Information

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BAC

Clone NameB6Ng01-330B16
Chromosome2 (Build37)
Map Location 141,689,024 - 141,803,110
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC668913, LOC668914, Kif16b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330B16.bB6Ng01-330B16.g
ACCGA116876GA116877
length1,1461,082
definitionB6Ng01-330B16.b B6Ng01-330B16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,801,961 - 141,803,110)(141,689,024 - 141,690,114)
sequence
gaattcaggaccttcagaagaacagtcagtgcccgtacccactgagtcat
ttcgccagcccctggccatcatctcttatggatgaaatgagaactgtctg
acattttatttccatgatgggttatttatggtacaaaggtactaactgat
attctcaggaacgttgatgtttgtgatgagctatcaaaggtcagaagaaa
tatatagctatgtcttcctgtaccccattaaatggatgtaatggaaactt
gttgctttagacatcaaattaaactaccacttcactagtttgaaaatgta
ttttgagtttgctcaaaagtagtaaagagaaaaatcatttaaattggagg
gcgggggtgggaaaagagtagaaaagtctactttgtcatctaaaaaataa
aaaaaaatcagatttttttttgtcccctgagatgtatatacatataataa
gcatttttctcaatgattatgaagagcaatcaaccaacagtggtcaattt
tccgattttaaaggcacctagagtgtccactaatcgatttcatttctaaa
ggtgcaatattgtagcaaaaatggacatgttttaaaaataaataggaata
ttagtggaactgatttggtacatttctgcacttgaattttctagctgtta
ctgctctttttcacatttcctttgcagattgtaaatttttataagtttaa
acttaccagtacactatttctcatctcttcaactgacagcttaagttata
gccagagcagacggctaattgggaggaattctaccatgtcaatcttgaaa
agtgcttaccaaccataatgtactggttgcaaagacatagattttataga
ttttctctttttcatgtcttctacatttttcatactcttagagtagaaaa
atatcaagagatctaagcaataagtaggacctacctattgtatccaaatg
ccaaagaaaagcttcaaataccaaagaaatgctgtacatctcaagggttg
accagtactccagaataaacaacactatggagattataacaagtgcctaa
aagaaaaaaactttttctatgtcagtgatttatgagtattaggtcccaat
cttgtaatatcttgtcctcactgtatgactgatccaacaatagtca

gaattcctttttccagagaagattccagtgagtgaatgaaagtaatgtcc
ctataactccccatcttctttaattaacaagccagagaggtaacagttat
ctcatctgtcagccatcttgacagcttgctgtggaaataaattcaaaacc
tagaatcttcctcaggctcaagccccagcaactgacactgtacaaccaaa
gatctactttgatttggcatgcttgggcaatacaggatggtgattccctc
actgacagactgaggaaggaggagtgctgtgaattcataattacctttct
aatatattaaattccatgctagccagagcctcaaaacaattgtctcagag
aatgaaaacaaaaccaaaaacaaacacacaaaagtcccttgagatcttgt
gaaagctcaataatgtagttcttcacagggtctattccaggaccctcaga
ataactccctcaaaagtgttatagctcataaatttcatcttacaagatgt
gagcagtactagacaggtggaaccaattcagggatccagacaagggctgc
tgtctgtctgagtcttccaaatgccgaagcacttgctgttcttacagcat
ggtatgacagccaccatcttctcccccccccaccccccgtaacaatctgt
tcttgatgttgggctctatcccattttcttgctgagggatcaggtctcta
aaccatatgctgtaactggaaggctagcccagttgtagcctttggatttt
taaatgagtgaaatgctacctctcctattacttcccattatctttggact
tacctcagtctgatcctgaatcctagtaatttctctgactgagactaaag
aatagatgcaatgtgatcagcaatttgaagattggaatgctgtgaaattg
ctctcctctgccacgttttttgattcccattttcagaggctgtcctgtct
cctgccatgagttgacatgtgctctgattctggagaggctttgaacagct
accaagtgggtggaaaattctgagtgactcactacgtttatgtggatatg
ctttcatttgtccatcatgctacttatctcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_141801961_141803110
seq2: B6Ng01-330B16.b_50_1195 (reverse)

seq1  TGACTATTGTT-GATCAAGTCATTACAGTGAGGACAAGATATTAC-AGAT  48
      ||||||||||| |||| ||||| |||||||||||||||||||||| ||||
seq2  TGACTATTGTTGGATC-AGTCA-TACAGTGAGGACAAGATATTACAAGAT  48

seq1  TGGGGGCCCCTAAATACTCATAAATCCACTGGACATAGAAAAAGTTTTTT  98
      ||||    ||| ||||||||||||| |||| |||||||||||||||||||
seq2  TGGG---ACCT-AATACTCATAAAT-CACT-GACATAGAAAAAGTTTTTT  92

seq1  --CTTTAGGCACTTGTTATAAATCTCCATAGTG-TGTTTATTCTGGAGTA  145
         |||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  TCTTTTAGGCACTTGTTAT-AATCTCCATAGTGTTGTTTATTCTGGAGTA  141

seq1  CTGGTCAACCCTTGAGATGTACAGCATTTCTTTGGTATTTGAAGCTTTTC  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCAACCCTTGAGATGTACAGCATTTCTTTGGTATTTGAAGCTTTTC  191

seq1  TTTGGCATTTGGATACAATAGGTAGGTCCTACTTATTGCTTAGATCTCTT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCATTTGGATACAATAGGTAGGTCCTACTTATTGCTTAGATCTCTT  241

seq1  GATATTTTTCTACTCTAAGAGTATGAAAAATGTAGAAGACATGAAAAAGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTTCTACTCTAAGAGTATGAAAAATGTAGAAGACATGAAAAAGA  291

seq1  GAAAATCTATAAAATCTATGTCTTTGCAACCAGTACATTATGGTTGGTAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCTATAAAATCTATGTCTTTGCAACCAGTACATTATGGTTGGTAA  341

seq1  GCACTTTTCAAGATTGACATGGTAGAATTCCTCCCAATTAGCCGTCTGCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTTCAAGATTGACATGGTAGAATTCCTCCCAATTAGCCGTCTGCT  391

seq1  CTGGCTATAACTTAAGCTGTCAGTTGAAGAGATGAGAAATAGTGTACTGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTATAACTTAAGCTGTCAGTTGAAGAGATGAGAAATAGTGTACTGG  441

seq1  TAAGTTTAAACTTATAAAAATTTACAATCTGCAAAGGAAATGTGAAAAAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTAAACTTATAAAAATTTACAATCTGCAAAGGAAATGTGAAAAAG  491

seq1  AGCAGTAACAGCTAGAAAATTCAAGTGCAGAAATGTACCAAATCAGTTCC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTAACAGCTAGAAAATTCAAGTGCAGAAATGTACCAAATCAGTTCC  541

seq1  ACTAATATTCCTATTTATTTTTAAAACATGTCCATTTTTGCTACAATATT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATATTCCTATTTATTTTTAAAACATGTCCATTTTTGCTACAATATT  591

seq1  GCACCTTTAGAAATGAAATCGATTAGTGGACACTCTAGGTGCCTTTAAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTTTAGAAATGAAATCGATTAGTGGACACTCTAGGTGCCTTTAAAA  641

seq1  TCGGAAAATTGACCACTGTTGGTTGATTGCTCTTCATAATCATTGAGAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAAAATTGACCACTGTTGGTTGATTGCTCTTCATAATCATTGAGAAA  691

seq1  AATGCTTATTATATGTATATACATCTCAGGGGACAAAAAAAAATCTGATT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTATTATATGTATATACATCTCAGGGGACAAAAAAAAATCTGATT  741

seq1  TTTTTTTATTTTTTAGATGACAAAGTAGACTTTTCTACTCTTTTCCCACC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATTTTTTAGATGACAAAGTAGACTTTTCTACTCTTTTCCCACC  791

seq1  CCCGCCCTCCAATTTAAATGATTTTTCTCTTTACTACTTTTGAGCAAACT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCCCTCCAATTTAAATGATTTTTCTCTTTACTACTTTTGAGCAAACT  841

seq1  CAAAATACATTTTCAAACTAGTGAAGTGGTAGTTTAATTTGATGTCTAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATACATTTTCAAACTAGTGAAGTGGTAGTTTAATTTGATGTCTAAA  891

seq1  GCAACAAGTTTCCATTACATCCATTTAATGGGGTACAGGAAGACATAGCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAAGTTTCCATTACATCCATTTAATGGGGTACAGGAAGACATAGCT  941

seq1  ATATATTTCTTCTGACCTTTGATAGCTCATCACAAACATCAACGTTCCTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTCTTCTGACCTTTGATAGCTCATCACAAACATCAACGTTCCTG  991

seq1  AGAATATCAGTTAGTACCTTTGTACCATAAATAACCCATCATGGAAATAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATCAGTTAGTACCTTTGTACCATAAATAACCCATCATGGAAATAA  1041

seq1  AATGTCAGACAGTTCTCATTTCATCCATAAGAGATGATGGCCAGGGGCTG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCAGACAGTTCTCATTTCATCCATAAGAGATGATGGCCAGGGGCTG  1091

seq1  GCGAAATGACTCAGTGGGTACGGGCACTGACTGTTCTTCTGAAGGTCCTG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAAATGACTCAGTGGGTACGGGCACTGACTGTTCTTCTGAAGGTCCTG  1141

seq1  AATTC  1150
      |||||
seq2  AATTC  1146


seq1: chr2_141689024_141690114
seq2: B6Ng01-330B16.g_68_1149

seq1  GAATTCCTTTTTCCAGAGAAGATTCCAGTGAGTGAATGAAAGTAATGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTTCCAGAGAAGATTCCAGTGAGTGAATGAAAGTAATGTCC  50

seq1  CTATAACTCCCCATCTTCTTTAATTAACAAGCCAGAGAGGTAACAGTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAACTCCCCATCTTCTTTAATTAACAAGCCAGAGAGGTAACAGTTAT  100

seq1  CTCATCTGTCAGCCATCTTGACAGCTTGCTGTGGAAATAAATTCAAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTGTCAGCCATCTTGACAGCTTGCTGTGGAAATAAATTCAAAACC  150

seq1  TAGAATCTTCCTCAGGCTCAAGCCCCAGCAACTGACACTGTACAACCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCTTCCTCAGGCTCAAGCCCCAGCAACTGACACTGTACAACCAAA  200

seq1  GATCTACTTTGATTTGGCATGCTTGGGCAATACAGGATGGTGATTCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTACTTTGATTTGGCATGCTTGGGCAATACAGGATGGTGATTCCCTC  250

seq1  ACTGACAGACTGAGGAAGGAGGAGTGCTGTGAATTCATAATTACCTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACAGACTGAGGAAGGAGGAGTGCTGTGAATTCATAATTACCTTTCT  300

seq1  AATATATTAAATTCCATGCTAGCCAGAGCCTCAAAACAATTGTCTCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTAAATTCCATGCTAGCCAGAGCCTCAAAACAATTGTCTCAGAG  350

seq1  AATGAAAACAAAACCAAAAACAAACACACAAAAGTCCCTTGAGATCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAACAAAACCAAAAACAAACACACAAAAGTCCCTTGAGATCTTGT  400

seq1  GAAAGCTCAATAATGTAGTTCTTCACAGGGTCTATTCCAGGACCCTCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTCAATAATGTAGTTCTTCACAGGGTCTATTCCAGGACCCTCAGA  450

seq1  ATAACTCCCTCAAAAGTGTTATAGCTCATAAATTTCATCTTACAAGATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTCCCTCAAAAGTGTTATAGCTCATAAATTTCATCTTACAAGATGT  500

seq1  GAGCAGTACTAGACAGGTGGAACCAATTCAGGGATCCAGACAAGGGCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTACTAGACAGGTGGAACCAATTCAGGGATCCAGACAAGGGCTGC  550

seq1  TGTCTGTCTGAGTCTTCCAAATGCCGAAGCACTTGCTGTTCTTACAGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTGAGTCTTCCAAATGCCGAAGCACTTGCTGTTCTTACAGCAT  600

seq1  GGTATGACAGCCACCATCTTCTCCCCCCCCCCCCCCCCGTAACAATCTGT  650
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGTATGACAGCCACCATCTTCTCCCCCCCCCACCCCCCGTAACAATCTGT  650

seq1  TCTTGATGTTGGGCTCTATCCCATTTTCTTGCTGAGGGATCAGGTCTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATGTTGGGCTCTATCCCATTTTCTTGCTGAGGGATCAGGTCTCTA  700

seq1  AACCATATGCTGTAACTGGAAGGCTAGCCCAGTTGTAGCCTTTGGATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATATGCTGTAACTGGAAGGCTAGCCCAGTTGTAGCCTTTGGATTTT  750

seq1  TAAATGAGTGAAATGCTACCTCTCCTATTACTTCCCATTATCTTTGGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAGTGAAATGCTACCTCTCCTATTACTTCCCATTATCTTTGGACT  800

seq1  TACCTCAGTCTGATCCTGAATCCTAGTAATTTCTCTGACTGAGACTAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCAGTCTGATCCTGAATCCTAGTAATTTCTCTGACTGAGACTAAAG  850

seq1  AATAGATGCAATGTGATCAGCAATTTGAAGATTGGAATGCTGTGAAATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATGCAATGTGATCAGCAATTTGAAGATTGGAATGCTGTGAAATTG  900

seq1  CTCTCCTCTGCCACGTTTTTTGATTCCCATTTTCAGAGGCTGTCCTGTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCTGCCACGTTTTTTGATTCCCATTTTCAGAGGCTGTCCTGTCT  950

seq1  CCTGCCATGAGTTGACATGGTGCTCCTGATTCTGGAGAGGCTTTGAACAG  1000
      |||||||||||||||||| ||||| |||||||||||||||||||||||||
seq2  CCTGCCATGAGTTGACAT-GTGCT-CTGATTCTGGAGAGGCTTTGAACAG  998

seq1  CTAACCAAGTTGGGTGGAAAATTCTGAGTTGACTCACTAAGGTTTTATGT  1050
      || |||||| |||||||||||||||||| |||||||||| |  |||||||
seq2  CT-ACCAAG-TGGGTGGAAAATTCTGAG-TGACTCACTACG--TTTATGT  1043

seq1  GGATATGCTTTCATTTGTCCATCATGCCTACTTTATCTCAA  1091
      |||||||||||||||||||||||||| |||| |||||||||
seq2  GGATATGCTTTCATTTGTCCATCATG-CTAC-TTATCTCAA  1082


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