BAC Information

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BAC

Clone NameB6Ng01-330P03
Chromosome2 (Build37)
Map Location 56,914,908 - 56,916,035
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910, Gpd2, LOC271788, Galnt5, A330104H05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330P03.bB6Ng01-330P03.g
ACCGA117453GA117454
length1,1731,123
definitionB6Ng01-330P03.b B6Ng01-330P03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgtggatgtggagaaagaggaacactcctccattgttggt
gggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaactggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacctaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
agaaactcacacaatatgtattcactgataagtggatattagccccaaac
ctaggatacccaagatataagatataatttgctaaacaaatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagatttggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa
aggacccagatgtagctgtctcttgtgagacaatgcccggggccctagca
aacacagaagtggatgctcacagtcagctaatggatggatcatagggctc
ccaatggaggagctagagaagtagccaaggagctaaagggatctgcaccc
tatagtggaacacatatgactaccagtaccccggagctcttgactctagc
tgcatatatatcaaagatggtctagtctgcatcactggaagaaaggtcca
tgacttgcaaactttatatttgcccagtcaggtatcactaggtctaaaaa
tgtaattgttgcagggggaagtg

gaattcagtcaggacttccccaagcatgaatcctctcttgttccattcac
tccagatgctggttggacatccagacaggggaagcaagagttctgttggt
ggagcatttgtcccctttcttggctactgagagtgtcatgtgaagagtaa
tgcctgactacagaaccaataatcccaaatgacagaaagatttgagtccc
cacgcttccttgacaggagcagaacactcaagaatgataagctcactgtc
cactgtgttgtggacacctagggtgggaaacaccaagatggcttagaagg
taaacatgcttgctggccagcttgatgacttgaatttcaccctgaaactt
acatggtagaaggaaaaagcagatgtctacaaatgatactctgacctcca
cacaagtgccatggaatgtgcatgttcacacatacatgatgtataaataa
ataaataaataaataaatttaataacaataataaagaaagtgaaaaaaaa
aaagagtcatagggaacctctcaaaagatgcaatgggaaactctaagaac
ctctcatcacatggtaaatgtaggagctacatatccagtgttgtcaagca
atgttgtgtggacctcacagtattggtgtcctcctgagttcagcacagct
gtggatgcctacacatgaacaagtcaattaatattctgtcatggatggga
gagaactggtagttgagggctgctgggggaagagagagtcactgttgatg
tgtggatcctagtaggttgccgatgccccagtggctggctggctggccta
cgctcagatacatctagttagcactaactggtcttagaatgaaaaaggag
aagaagtttattaggttagcctgaaagaaacaggattcagcttcgtggtt
tttgtcttcaagtatgtcttaagtagaataaacctttaacattttctgta
tatcttcaagaatggagattgttgatatttacgattcctaggcagttaaa
ttggcgacactttcatcccactagatacagaaccatctagacttccagga
taaatatggcatatactttccaacttagagtatgcctcttccttagagaa
tgcctgtagaaacggcaagggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_56914908_56916035
seq2: B6Ng01-330P03.g_70_1192 (reverse)

seq1  TACCC-TGCTGTTTCTACAGGCATTCTCTAGGGAGAGGGCATAACTCAAA  49
      ||||| ||| |||||||||||||||||||| |||   ||||| |||| ||
seq2  TACCCTTGCCGTTTCTACAGGCATTCTCTAAGGAAGAGGCAT-ACTCTAA  49

seq1  AGTTTTGAAAAGTATATG-CATATTATCCCTGAAAGTTCCTAAGATGTGT  98
          ||| |||||||||| ||||||   |||| ||||  || |||||  |
seq2  ---GTTGGAAAGTATATGCCATATTTATCCTGGAAGT--CT-AGATGGTT  93

seq1  CTGTATCTAGTGGG-TGAAAGTGTTCGCCAAATTTAAACTGCCTAGGATT  147
      |||||||||||||| |||||||| |||||||  || |||||||||||| |
seq2  CTGTATCTAGTGGGATGAAAGTG-TCGCCAA--TTTAACTGCCTAGGAAT  140

seq1  CGTAAATATCAACAATCTCCATTCTTGAAGATAATACAGAAAATGT--AA  195
      |||||||||||||||||||||||||||||||| |||||||||||||  ||
seq2  CGTAAATATCAACAATCTCCATTCTTGAAGAT-ATACAGAAAATGTTAAA  189

seq1  AGTTTATTCTACTTAAGACATACTTGAAGACAAAAACCACGAAGCTGAAT  245
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATTCTACTTAAGACATACTTGAAGACAAAAACCACGAAGCTGAAT  239

seq1  CCTG-TTCTTTCAGGCTAACCTAATAAACTTCTTCTCCTTTTTCATTCTA  294
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTCTTTCAGGCTAACCTAATAAACTTCTTCTCCTTTTTCATTCTA  289

seq1  AGACCAGTTAGTGCTAACTAGATGTATCTGAGCGTAGGCCAGCCAGCCAG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGTTAGTGCTAACTAGATGTATCTGAGCGTAGGCCAGCCAGCCAG  339

seq1  CCACTGGGGCATCGGCAACCTACTAGGATCCACACATCAACAGTGACTCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGGGCATCGGCAACCTACTAGGATCCACACATCAACAGTGACTCT  389

seq1  CTCTTCCCCCAGCAGCCCTCAACTACCAGTTCTCTCCCATCCATGACAGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCCCCAGCAGCCCTCAACTACCAGTTCTCTCCCATCCATGACAGA  439

seq1  ATATTAATTGACTTGTTCATGTGTAGGCATCCACAGCTGTGCTGAACTCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATTGACTTGTTCATGTGTAGGCATCCACAGCTGTGCTGAACTCA  489

seq1  GGAGGACACCAATACTGTGAGGTCCACACAACATTGCTTGACAACACTGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGACACCAATACTGTGAGGTCCACACAACATTGCTTGACAACACTGG  539

seq1  ATATGTAGCTCCTACATTTACCATGTGATGAGAGGTTCTTAGAGTTTCCC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAGCTCCTACATTTACCATGTGATGAGAGGTTCTTAGAGTTTCCC  589

seq1  ATTGCATCTTTTGAGAGGTTCCCTATGACTCTTTTTTTTTTTCACTTTCT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATCTTTTGAGAGGTTCCCTATGACTCTTTTTTTTTTTCACTTTCT  639

seq1  TTATTATTGTTATTAAATTTATTTATTTATTTATTTATTTATACATCATG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTGTTATTAAATTTATTTATTTATTTATTTATTTATACATCATG  689

seq1  TATGTGTGAACATGCACATTCCATGGCACTTGTGTGGAGGTCAGAGTATC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGAACATGCACATTCCATGGCACTTGTGTGGAGGTCAGAGTATC  739

seq1  ATTTGTAGACATCTGCTTTTTCCTTCTACCATGTAAGTTTCAGGGTGAAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTAGACATCTGCTTTTTCCTTCTACCATGTAAGTTTCAGGGTGAAA  789

seq1  TTCAAGTCATCAAGCTGGCCAGCAAGCATGTTTACCTTCTAAGCCATCTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTCATCAAGCTGGCCAGCAAGCATGTTTACCTTCTAAGCCATCTT  839

seq1  GGTGTTTCCCACCCTAGGTGTCCACAACACAGTGGACAGTGAGCTTATCA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTCCCACCCTAGGTGTCCACAACACAGTGGACAGTGAGCTTATCA  889

seq1  TTCTTGAGTGTTCTGCTCCTGTCAAGGAAGCGTGGGGACTCAAATCTTTC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAGTGTTCTGCTCCTGTCAAGGAAGCGTGGGGACTCAAATCTTTC  939

seq1  TGTCATTTGGGATTATTGGTTCTGTAGTCAGGCATTACTCTTCACATGAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTGGGATTATTGGTTCTGTAGTCAGGCATTACTCTTCACATGAC  989

seq1  ACTCTCAGTAGCCAAGAAAGGGGACAAATGCTCCACCAACAGAACTCTTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCAGTAGCCAAGAAAGGGGACAAATGCTCCACCAACAGAACTCTTG  1039

seq1  CTTCCCCTGTCTGGATGTCCAACCAGCATCTGGAGTGAATGGAACAAGAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCTGTCTGGATGTCCAACCAGCATCTGGAGTGAATGGAACAAGAG  1089

seq1  AGGATTCATGCTTGGGGAAGTCCTGACTGAATTC  1128
      ||||||||||||||||||||||||||||||||||
seq2  AGGATTCATGCTTGGGGAAGTCCTGACTGAATTC  1123


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