BAC Information

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BAC

Clone NameB6Ng01-331E19
Chromosome2 (Build37)
Map Location 151,090,176 - 151,091,290
singlet/doubletsinglet
Overlap genenone
Upstream gene3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605, Pygb, Abhd12, Gins1, LOC668925, 4930519N13Rik, LOC668926, Nanp, LOC433486, LOC381390, 4930442J19Rik
Downstream geneLOC100043839, LOC100043840, 4921509C19Rik, Nsfl1c, Fkbp1a, Sdcbp2, Snph, LOC668929, BC052486, 5430405G05Rik, Psmf1, Rspo4, Angpt4, 5430432M24Rik, 2310046K01Rik, Scrt2, Srxn1, Tcf15, LOC100043843, Csnk2a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331E19.bB6Ng01-331E19.g
ACCGA117704GA117705
length1,1301,212
definitionB6Ng01-331E19.b B6Ng01-331E19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactgtcaaacactccagacttctccttgactccactcagagga
caggtggtgcacctcacctttcatgtggtcagatgtcctatgacaaaatg
ttcaccatggcatggcaaatggctccgatgaagcagtagaagaggtggtt
agtgttttcaaatgagcgtggatacaagagaaaactaatttgaaggacac
ctaaagtcacatgaaatatgcaagtactttgtttagcatggaggttctct
ggaaaattcactagcatgaactgtacataagtacatctcaaagtgtgtgt
gtacctgtgtgtccctccaaaatagttttgatattgagaagtgtgcatcc
atatgaggttgcaaagcaacaagcaaactcaataatagttacagtgctgg
ggtgagttgtgaaggtgtctgaatcttggtgggttaggagcaagctgtcc
agcaagtcaggatggttttgagagctgcaccaaaagcaatggactcacct
gttcctgtccactctcttcccttatgagcactctctttgctctgtttctg
actctcgctggtcagctgtcgtcatcttggacacaatcacaaggagttca
ggaactctggggtcttaatctgcttccagtatctactgtctcttctaatg
gctcatgggtacatttggagacagacagctggccatcttaccatgcctgg
aagttcctctaaggcccgtcttcctgatggtgacctgcatgcagtggtac
cttcattccaggatttctgagttacatggagctcctcacttggctggaac
atttgtgacactaccaaccatcatgaaacaacctagagcacaaagaaggg
agtcatgagatcagacctgtctcctagactccttgctggggtcctcatgc
cccagaggacccaacaaggctattacaccccaataaacacactgctcctg
tgcagataggggaatagtttgcctttacttaccaacctgtgatgtagaat
atggcttcccacaggggcccaagcccctgtgagaaccttacctgaattct
ctgccttgaacctgtctttcatcctcaacaggctctgctatctactcctc
ttgaattccatcattccagaaagtacagtg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcgaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgttagagactgccttatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttatcgaa
aggacccagattgtagctgtctcttgtgagactatgccggggcctaagca
aacacagaagtggatgcccacagtcagctaattgatggattacagggcct
cccaatgggaggagctagagaaagtaacccaggagcctaaagggatctct
ggcaaccctaataggtggatcaacattatgaactaaccagtatccccggg
agctcttgacttctagctgcatatgttattcaaagatggcttagtcggcc
catatccatggaagagaaggccattttgacacacaaatctttaatgcctg
gaatctggtaaccgtcaggtctaaatgagggagtgcgtgggtgatgagtg
ggagatggtccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_151090176_151091290
seq2: B6Ng01-331E19.b_48_1177 (reverse)

seq1  CACTGTACTTCCTGG-ATGATGGAAT--CAGA-GAGTAGATAGC--AGCT  44
      |||||||||| |||| ||||||||||   ||| |||||||||||  ||| 
seq2  CACTGTACTTTCTGGAATGATGGAATTCAAGAGGAGTAGATAGCAGAGCC  50

seq1  TGTTGAGGATG-AAGACAGGCTC-AGGC-GAGAA-TCAGGTAGGGTTCTC  90
      ||||||||||| |||||||| || |||| ||||| ||||||| |||||||
seq2  TGTTGAGGATGAAAGACAGGTTCAAGGCAGAGAATTCAGGTAAGGTTCTC  100

seq1  ACA-GGGCTT-GGCCCCTGTGGGAAGCCATA-TCTACATCACAGGTT-GT  136
      ||| |||||| |||||||||||||||||||| ||||||||||||||| ||
seq2  ACAGGGGCTTGGGCCCCTGTGGGAAGCCATATTCTACATCACAGGTTGGT  150

seq1  AAGTAAAGGCAAACTATTCCCCTATCTGCACAGGAGCAGTGTGTTTATTG  186
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAGGCAAACTATTCCCCTATCTGCACAGGAGCAGTGTGTTTATTG  200

seq1  GGGTGTAATAGCCTTGTTGGGTCCTCTGGGGCATGAGGA-CCCAGCAAGG  235
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGGTGTAATAGCCTTGTTGGGTCCTCTGGGGCATGAGGACCCCAGCAAGG  250

seq1  AGTCTAGGAGACAGGTCTGATCTCATGACTCCCTTCTTTGTGCTCTAGGT  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAGGAGACAGGTCTGATCTCATGACTCCCTTCTTTGTGCTCTAGGT  300

seq1  TGTTTCATGATGGTTGGTAGTGTCACAAATGTTCCAGCCAAGTGAGGAGC  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCATGATGGTTGGTAGTGTCACAAATGTTCCAGCCAAGTGAGGAGC  350

seq1  TCCATGTAACTCAGAAATCCTGGAATGAAGGTACCACTGCATGCAGGTCA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTAACTCAGAAATCCTGGAATGAAGGTACCACTGCATGCAGGTCA  400

seq1  CCATCAGGAAGACGGGCCTTAGAGGAACTTCCAGGCATGGTAAGATGGCC  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGGAAGACGGGCCTTAGAGGAACTTCCAGGCATGGTAAGATGGCC  450

seq1  AGCTGTCTGTCTCCAAATGTACCCATGAGCCATTAGAAGAGACAGTAGAT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCTGTCTCCAAATGTACCCATGAGCCATTAGAAGAGACAGTAGAT  500

seq1  ACTGGAAGCAGATTAAGACCCCAGAGTTCCTGAACTCCTTGTGATTGTGT  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAGCAGATTAAGACCCCAGAGTTCCTGAACTCCTTGTGATTGTGT  550

seq1  CCAAGATGACGACAGCTGACCAGCGAGAGTCAGAAACAGAGCAAAGAGAG  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATGACGACAGCTGACCAGCGAGAGTCAGAAACAGAGCAAAGAGAG  600

seq1  TGCTCATAAGGGAAGAGAGTGGACAGGAACAGGTGAGTCCATTGCTTTTG  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATAAGGGAAGAGAGTGGACAGGAACAGGTGAGTCCATTGCTTTTG  650

seq1  GTGCAGCTCTCAAAACCATCCTGACTTGCTGGACAGCTTGCTCCTAACCC  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGCTCTCAAAACCATCCTGACTTGCTGGACAGCTTGCTCCTAACCC  700

seq1  ACCAAGATTCAGACACCTTCACAACTCACCCCAGCACTGTAACTATTATT  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGATTCAGACACCTTCACAACTCACCCCAGCACTGTAACTATTATT  750

seq1  GAGTTTGCTTGTTGCTTTGCAACCTCATATGGATGCACACTTCTCAATAT  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGCTTGTTGCTTTGCAACCTCATATGGATGCACACTTCTCAATAT  800

seq1  CAAAACTATTTTGGAGGGACACACAGGTACACACACACTTTGAGATGTAC  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTATTTTGGAGGGACACACAGGTACACACACACTTTGAGATGTAC  850

seq1  TTATGTACAGTTCATGCTAGTGAATTTTCCAGAGAACCTCCATGCTAAAC  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTACAGTTCATGCTAGTGAATTTTCCAGAGAACCTCCATGCTAAAC  900

seq1  AAAGTACTTGCATATTTCATGTGACTTTAGGTGTCCTTCAAATTAGTTTT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACTTGCATATTTCATGTGACTTTAGGTGTCCTTCAAATTAGTTTT  950

seq1  CTCTTGTATCCACGCTCATTTGAAAACACTAACCACCTCTTCTACTGCTT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTATCCACGCTCATTTGAAAACACTAACCACCTCTTCTACTGCTT  1000

seq1  CATCGGAGCCATTTGCCATGCCATGGTGAACATTTTGTCATAGGACATCT  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGGAGCCATTTGCCATGCCATGGTGAACATTTTGTCATAGGACATCT  1050

seq1  GACCACATGAAAGGTGAGGTGCACCACCTGTCCTCTGAGTGGAGTCAAGG  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACATGAAAGGTGAGGTGCACCACCTGTCCTCTGAGTGGAGTCAAGG  1100

seq1  AGAAGTCTGGAGTGTTTGACAGTTGAATTC  1115
      ||||||||||||||||||||||||||||||
seq2  AGAAGTCTGGAGTGTTTGACAGTTGAATTC  1130