BAC Information

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BAC

Clone NameB6Ng01-331J11
Chromosome2 (Build37)
Map Location 84,366,242 - 84,367,229
singlet/doubletsinglet
Overlap genenone
Upstream geneZc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725, Calcrl, Tfpi, LOC672763
Downstream geneCtnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331J11.bB6Ng01-331J11.g
ACCGA117915GA117916
length1,261992
definitionB6Ng01-331J11.b B6Ng01-331J11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaagtcagcgaagatatatatgagcagagggtaaaaagcccagc
tctctagggataaagacctagaaacacaagggcaaggatacaggagcgag
ccaggcaatgtgactgaagatacaaggcactgtgaggaacttgggatgct
cagggaactcaccagcggacacttgggtgtgaagctttcggtatccgctg
cacaggctctctgacaccctgggagctgctgtaattttgcacatcccaaa
cactacttaatttaatgatcaactcctgggattatgtctgggttgtgatt
taaaaatagactttccagtgtaaaagaagtcggcaggaaggggctccttg
ctgaattaagctgtgtttaagtgagaaccgccactgcggaacaacacgtt
ccctgtgaagatggcaaaccggtttcagaggctctaacctttacgagctg
ctattatcaacccaattgtatgttttttcctgttgcacaaacatgttccc
aaaagacttttaaaatagctttctttcctgctaaaacgttgggccaagca
ctttttctgactcgcagctctaagtggaccaggatgtgttaaaggaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaactgccccgctgcccttgtcgggt
ggattaggccgcctcatcatcgaagagttgcctcacaactccacctcctg
ctgctttctgggggtattcccccagtggggcgtccccccaacaaaacctc
tccggaagaaaaaaaagacgcacttctcaccgacgcaccaccacctcttt
ttatcccacgggtcctcgaaagagtcggttgttcccccccagccgcggtt
ttcctagttgtgaaaaaaaatcacaacagaagatattacttgttgtgttg
acacctcatacaaccccattagaggaagagaaatattgagctgttttttt
acccccccaccatcgaggacgcaagatgaggatggtgcttttacacccga
ggtgtagacaccccgcgtgaaatacttctttctatcaaagaaatagtgcg
ccgattctctgcacagggtgtttattaggctacgtgggcttcttcagatt
agtagctactacttctcttcttcacccctatcatccttcttttatatcta
tctgtggtgtgctgcaggaggcatgtagtactactgcatgcgaccagagc
gctgctagtacttgtctcgtttgcggtggcgtgctttgtgctttcatcga
cgactgcattc
gaattctttataataattcttcataataagataatttctgtttccatatg
ttttcctgcaaatgtcatgattttgttattctttatctttcttttttttt
tttttagtgtgtgcgtatgcatgcacatgtgtgtttgaaacacgatatgg
tatgaatgtggaggctggaggaattggtttcccctttaccctgtgagtcc
cagggatggagctctggcctccaggcttgagagcaaggtttttacctact
gagccccttcaccatctcaagtttcctttttcttgtggctgaataaaatc
ccaccttatttcactctcaatatacattcatctgttgatgtgcatctatg
agggttctatttcctagttcttgggatcagttcagccataaacaattatg
tacaagcatcttttcggtgggacttagagtccttggcctatatgtccagg
aatggcacagctgcgccgtgtaggaattttaattttacttgtcttgaaaa
ataaccatactaattgccattgtgactgtgcaaactggcaggagttaata
aggctttctcttttcccacatcctgcccggcatgcgctctcatttatttt
cttgatagtcattctgactggggtgtgatggaatcttaaagcagtgttag
tttacatttccctggtggctaaggatgttggacacttttccaagtatgtt
cgatatgtttcaagttattcgatcttttgagaactacttgtttattcatt
ggcccattttttttttgattaaaaaaatttaaaaattttttgtggtttta
tgcattctagctattagcctttgcctgaggtgtagctgggctgtgtcgtg
ctcccctgtttcggtagcagtgtattcactctaacagtgtattcccttta
acagtcagtacccttttttttttttggtccctgattggctaacattcgga
actggtgagactgatataaatgagcatccgctatgaaccagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_84366242_84367229
seq2: B6Ng01-331J11.g_71_1062 (reverse)

seq1  GCTGGTTCATAGCGGATGCTCATTTTATATCAGTCTCCACAGTTCCCGAA  50
      |||||||||||||||||||||| ||||||||||||||  ||||| |||||
seq2  GCTGGTTCATAGCGGATGCTCA-TTTATATCAGTCTCACCAGTT-CCGAA  48

seq1  TGTTAGCCAATCAGGGACC--AAAAAAAAAAGGGTACTGACTGTTAAAGG  98
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  TGTTAGCCAATCAGGGACCAAAAAAAAAAAAGGGTACTGACTGTTAAAGG  98

seq1  GAATACACTGTTAGAGTGAATACACTGCTACCG-AACAGGGGAGCACGAC  147
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAATACACTGTTAGAGTGAATACACTGCTACCGAAACAGGGGAGCACGAC  148

seq1  ACAG-CCAGCTACACCTCAGGCAAAGGGCTAATAGCTAGAATGCAT-AAA  195
      |||| |||||||||||||||||||| |||||||||||||||||||| |||
seq2  ACAGCCCAGCTACACCTCAGGCAAA-GGCTAATAGCTAGAATGCATAAAA  197

seq1  CCAC-AAAAATTTTTAAATTTTTTTAATC-AAAAAAAAATGGGCCAATGA  243
      |||| |||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCACAAAAAATTTTTAAATTTTTTTAATCAAAAAAAAAATGGGCCAATGA  247

seq1  ATAAACAAGTAGTTCTCAAAAGATCGAATAACTTGAAACATATCGAACAT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAAGTAGTTCTCAAAAGATCGAATAACTTGAAACATATCGAACAT  297

seq1  ACTTGGAAAAGTGTCCAACATCCTTAGCCACCAGGGAAATGTAAACTAAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGAAAAGTGTCCAACATCCTTAGCCACCAGGGAAATGTAAACTAAC  347

seq1  ACTGCTTTAAGATTCCATCACACCCCAGTCAGAATGACTATCAAGAAAAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTTAAGATTCCATCACACCCCAGTCAGAATGACTATCAAGAAAAT  397

seq1  AAATGAGAGCGCATGCCGGGCAGGATGTGGGAAAAGAGAAAGCCTTATTA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGAGCGCATGCCGGGCAGGATGTGGGAAAAGAGAAAGCCTTATTA  447

seq1  ACTCCTGCCAGTTTGCACAGTCACAATGGCAATTAGTATGGTTATTTTTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGCCAGTTTGCACAGTCACAATGGCAATTAGTATGGTTATTTTTC  497

seq1  AAGACAAGTAAAATTAAAATTCCTACACGGCGCAGCTGTGCCATTCCTGG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAGTAAAATTAAAATTCCTACACGGCGCAGCTGTGCCATTCCTGG  547

seq1  ACATATAGGCCAAGGACTCTAAGTCCCACCGAAAAGATGCTTGTACATAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAGGCCAAGGACTCTAAGTCCCACCGAAAAGATGCTTGTACATAA  597

seq1  TTGTTTATGGCTGAACTGATCCCAAGAACTAGGAAATAGAACCCTCATAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATGGCTGAACTGATCCCAAGAACTAGGAAATAGAACCCTCATAG  647

seq1  ATGCACATCAACAGATGAATGTATATTGAGAGTGAAATAAGGTGGGATTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATCAACAGATGAATGTATATTGAGAGTGAAATAAGGTGGGATTT  697

seq1  TATTCAGCCACAAGAAAAAGGAAACTTGAGATGGTGAAGGGGCTCAGTAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGCCACAAGAAAAAGGAAACTTGAGATGGTGAAGGGGCTCAGTAG  747

seq1  GTAAAAACCTTGCTCTCAAGCCTGGAGGCCAGAGCTCCATCCCTGGGACT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAACCTTGCTCTCAAGCCTGGAGGCCAGAGCTCCATCCCTGGGACT  797

seq1  CACAGGGTAAAGGGGAAACCAATTCCTCCAGCCTCCACATTCATACCATA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGTAAAGGGGAAACCAATTCCTCCAGCCTCCACATTCATACCATA  847

seq1  TCGTGTTTCAAACACACATGTGCATGCATACGCACACACTAAAAAAAAAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGTTTCAAACACACATGTGCATGCATACGCACACACTAAAAAAAAAA  897

seq1  AAAAGAAAGATAAAGAATAACAAAATCATGACATTTGCAGGAAAACATAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAGATAAAGAATAACAAAATCATGACATTTGCAGGAAAACATAT  947

seq1  GGAAACAGAAATTATCTTATTATGAAGAATTATTATAAAGAATTC  988
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAGAAATTATCTTATTATGAAGAATTATTATAAAGAATTC  992