BAC Information

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BAC

Clone NameB6Ng01-334J22
Chromosome2 (Build37)2 (Build37)
Map Location 150,064,831 - 150,065,421150,033,892 - 150,035,042
singlet/doubletsingletsinglet
Overlap geneEG245174
Upstream geneLOC433483, LOC383754, LOC100043593, LOC241715, Cst10, EG667048, C530025M09Rik, OTTMUSG00000015750, LOC279056, Zfp120
Downstream gene3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605, Pygb, Abhd12, Gins1, LOC668925, 4930519N13Rik, LOC668926, Nanp, LOC433486, LOC381390, 4930442J19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334J22.bB6Ng01-334J22.g
ACCGA120081GA120082
length1,1721,121
definitionB6Ng01-334J22.b B6Ng01-334J22.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(150,064,831 - 150,065,421)(150,033,892 - 150,035,042)
sequence
gaattcatactgtagagaaaccctataaatgtaatcaatgtggtaaattc
tttgcacaaagcaaccattttgtacgacataaaagaacacatactggaga
gaaaccctatgaatgtaatcaatgtgataaagcctttgcatgtcaaacta
gtctcctgtatcataaaagaacacattctggagagaaactctatgtctgt
aatgaatgtggcaaagcctttgtacttcaaagttatcttcagatacataa
aagaacacatactggagagaaaccctttggatgtgaccagtgtgataagg
catttgcacaaaacagtcatctcctaacacataaaagaacacatactgga
gagaaaccctttggatgtgaccagtgtgataaggcatttgcacaaaacag
tcatctcttaacacataaaagaactcatactggagagaaaccctatgaat
gtgagcaatgtggcaaagcctttgcaagtaatagtaatctgcaagtgcat
aaaaaaatgcacactggagagaaaccctatgaatgtaagcagtgtggtaa
agcctttgggtatcaaagtggtctgcaaaagcataaacgaacacatactg
gagagaaaccctatgaatgtaatcagtgtgataaggcatttgcatgtcaa
gctagtctcctgaatcataaacgatcacacactggtgagaagccatatga
atgtagtgaatgtggtaaagcctttgtacttccccgttatcttcaaatac
ataaaaggacacatactggagagaaaccctttgaatgtgaccaatgtgat
aaagcctttgctcgaaacactcttctcctaaaacataaaagaatacatac
tggacagaaagcctatggatgcaagcaatgtggcaaagcctttgcaaatc
acagtaatctccaagtgcataaaagaacacatactggagagaagccctac
gaatgtaagcagtgtggtaaagcctttggtgtcaaagtggtctgcatatc
ataaaagacacacacatacaggagagaacctatgactgtatcatgtgatc
tagtcttgcatgtcagaacattctcgagcactaagaaacattattgtaga
gaaactctgtgatatatttaatatgcgtaagccttggtacagttcggtcg
tcttcatcttaatgtaagaaat
gaattcctgcttatatagctgatacatccagccttgaggactgtacagct
acttggggcttggttaagtgagggaagacagcacagtcagcttttggagg
acaggcatgaaggactgtgaattgcaagtctctgcagaactgaacctaat
cagtttctggggtggaagccagggtaggtaaggactgtgctgtgtgtctt
tagtactttgaggcctaaagcaagctgtacttgtcactcaggacttaata
gccaatcatggcatccaactatgcccaccagcttgaagaatagagggctc
ttctagcttccaagttgtaggcttgctccaccattcatgtaggagcatgt
gaagcactctaaaaccactgctgtgatctgtgaggggagtgtgtgtgagt
ccatttagctcagacgacctcacgtagtgagctaggaggtgctttccaga
gatatgaaggagtggggaagcaacaagaagccaggtacagtatccaggtg
ttactcaagtggtgtttgcatctacctgggtcagggcactggcctcttaa
cgactttgttctgcaaactgagtttcctctagcatggggtgaagtgcctg
tgcctaaagacatatttgtcatttgcaatcattgttcaatgtgctttaaa
catagctgtgtaagtcagtttgccaaactcagaggtgaaatttctctagt
gtcttcaagaggttctgcacatgcattcatcaatgaggtttaggatctat
ttgggaataattttattgcacaccctctggatgattcctgggaagcagag
gatctccgagttcaagtctaccatgatcttgagacatattttttggacaa
ctaggattaccctgaaaaactttgtcttgaaaataaaataaaataaaacg
aaacaaatcaaaacaacaaaacaaacaaaagaaagaagggaaggaaggag
gaaggatggacggacagagagagatagtaagaagaagaaagaagagaaag
gaaggagaggaaagagagaagagagagaagaaggagagaggagagagaag
gagaagaaatctttcaggctagaatgtcttagcagtgaatgcaatttctc
acttcacttagttatttaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_150064831_150065421
seq2: B6Ng01-334J22.b_638_1217

seq1  ACATACTGGAGAGAAACCCTATGAATGTAATCAGTGTGATAAGGCATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACTGGAGAGAAACCCTATGAATGTAATCAGTGTGATAAGGCATTTG  50

seq1  CATGTCAAGCTAGTCTCCTGAATCATAAACGATCACACACTGGTGAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCAAGCTAGTCTCCTGAATCATAAACGATCACACACTGGTGAGAAG  100

seq1  CCATATGAATGTAGTGAATGTGGTAAAGCCTTTGTACTTCACAGTTATCT  150
      |||||||||||||||||||||||||||||||||||||||| | |||||||
seq2  CCATATGAATGTAGTGAATGTGGTAAAGCCTTTGTACTTCCCCGTTATCT  150

seq1  TCAAATACATAAAAGGACACATACTGGAGAGAAACCCTTTGAATGTGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATACATAAAAGGACACATACTGGAGAGAAACCCTTTGAATGTGACC  200

seq1  AATGTGATAAAGCCTTTGCTCGAAACACTCTTCTCCTAAAACATAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGATAAAGCCTTTGCTCGAAACACTCTTCTCCTAAAACATAAAAGA  250

seq1  ATACATACTGGACAGAAAGCCTATGGATGCAAGCAATGTGGCAAAGCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACTGGACAGAAAGCCTATGGATGCAAGCAATGTGGCAAAGCCTT  300

seq1  TGCAAATCACAGTAATCTCCAAGTGCATAAAAGAACACATACTGGAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATCACAGTAATCTCCAAGTGCATAAAAGAACACATACTGGAGAGA  350

seq1  AGCCCTACGAATGTAAGCAGTGTGGTAAAGCCTTTGGGTGTCAAAGTGGT  400
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGCCCTACGAATGTAAGCAGTGTGGTAAAGCCTTT-GGTGTCAAAGTGGT  399

seq1  CTGCAATATCATAAAAGAACACAACACATACAGGAGAGAAACCCTATGAC  450
      |||| |||||||||||| |||| |||||||||||||||||  ||||||||
seq2  CTGC-ATATCATAAAAG-ACAC-ACACATACAGGAGAGAA--CCTATGAC  444

seq1  TGTAATCAATGTGATCTAGCCTTGGCATGTCAG-ACATCTTCAGAGCACT  499
      ||| ||| ||||||||||| ||| ||||||||| ||||  || |||||||
seq2  TGT-ATC-ATGTGATCTAGTCTT-GCATGTCAGAACATTCTC-GAGCACT  490

seq1  AAAGAAACATTATTGTAGAGAAACTCTGTGAATATATTTAATATGGTGAA  549
       ||||||||||||||||||||||||||||| ||||||||||||||   ||
seq2  -AAGAAACATTATTGTAGAGAAACTCTGTG-ATATATTTAATATGCGTAA  538

seq1  GCCTTTGTACATTTCTATCGTCTTCATCTTTATGTAAGAAAT  591
      ||||| ||||| |||  ||||||||||||| |||||||||||
seq2  GCCTTGGTACAGTTCGGTCGTCTTCATCTTAATGTAAGAAAT  580

seq1: chr2_150033892_150035042
seq2: B6Ng01-334J22.g_67_1187

seq1  GAATTCCTGCTTATATAGCTGATACATCCAGCCTTGAGGACTGTACAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTTATATAGCTGATACATCCAGCCTTGAGGACTGTACAGCT  50

seq1  ACTTGGGGCTTGGTTAAGTGAGGGAAGACAGCACAGTCAGCTTTTGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGGCTTGGTTAAGTGAGGGAAGACAGCACAGTCAGCTTTTGGAGG  100

seq1  ACAGGCATGAAGGACTGTGAATTGCAAGTCTCTGCAGAACTGAACCTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCATGAAGGACTGTGAATTGCAAGTCTCTGCAGAACTGAACCTAAT  150

seq1  CAGTTTCTGGGGTGGAAGCCAGGGTAGGTAAGGACTGTGCTGTGTGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTGGGGTGGAAGCCAGGGTAGGTAAGGACTGTGCTGTGTGTCTT  200

seq1  TAGTACTTTGAGGCCTAAAGCAAGCTGTACTTGTCACTCAGGACTTAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACTTTGAGGCCTAAAGCAAGCTGTACTTGTCACTCAGGACTTAATA  250

seq1  GCCAATCATGGCATCCAACTATGCCCACCAGCTTGAAGAATAGAGGGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATCATGGCATCCAACTATGCCCACCAGCTTGAAGAATAGAGGGCTC  300

seq1  TTCTAGCTTCCAAGTTGTAGGCTTGCTCCACCATTCATGTAGGAGCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGCTTCCAAGTTGTAGGCTTGCTCCACCATTCATGTAGGAGCATGT  350

seq1  GAAGCACTCTAAAACCACTGCTGTGATCTGTGAGGGGAGTGTGTGTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACTCTAAAACCACTGCTGTGATCTGTGAGGGGAGTGTGTGTGAGT  400

seq1  CCATTTAGCTCAGACGACCTCACGTAGTGAGCTAGGAGGTGCTTTCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAGCTCAGACGACCTCACGTAGTGAGCTAGGAGGTGCTTTCCAGA  450

seq1  GATATGAAGGAGTGGGGAAGCAACAAGAAGCCAGGTACAGTATCCAGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGAAGGAGTGGGGAAGCAACAAGAAGCCAGGTACAGTATCCAGGTG  500

seq1  TTACTCAAGTGGTGTTTGCATCTACCTGGGTCAGGGCACTGGCCTCTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCAAGTGGTGTTTGCATCTACCTGGGTCAGGGCACTGGCCTCTTAA  550

seq1  CGACTTTGTTCTGCAAACTGAGTTTCCTCTAGCATGGGGTGAAGTGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTTTGTTCTGCAAACTGAGTTTCCTCTAGCATGGGGTGAAGTGCCTG  600

seq1  TGCCTAAAGACATATTTGTCATTTGCAATCATTGTTCAATGTGCTTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAAAGACATATTTGTCATTTGCAATCATTGTTCAATGTGCTTTAAA  650

seq1  CATAGCTGTGTAAGTCAGTTTGCCAAACTCAGAGGTGAAATTTCTCTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTGTGTAAGTCAGTTTGCCAAACTCAGAGGTGAAATTTCTCTAGT  700

seq1  GTCTTCAAGAGGTTCTGCACATGCATTCATCAATGAGGTTTAGGATCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCAAGAGGTTCTGCACATGCATTCATCAATGAGGTTTAGGATCTAT  750

seq1  TTGGGAATAATTTTATTGCACACCCTCTGGATGATTCCTGGGAAGCAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAATAATTTTATTGCACACCCTCTGGATGATTCCTGGGAAGCAGAG  800

seq1  GATCTCCGAGTTCAAGTCTACCATGATCTTGAGACATATTTTTTGGACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCCGAGTTCAAGTCTACCATGATCTTGAGACATATTTTTTGGACAA  850

seq1  CTAGGATTACCCTGAAAAACTTTGTCTTGAAAATAAAATAAAATAAAACG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATTACCCTGAAAAACTTTGTCTTGAAAATAAAATAAAATAAAACG  900

seq1  AAACAAATCAAAACAACAAAACAAAACAAAAAGAAAGAAGGGAAGGAAGG  950
      |||||||||||||||||||||||||   ||||||||||||||||||||||
seq2  AAACAAATCAAAACAACAAAACAAA--CAAAAGAAAGAAGGGAAGGAAGG  948

seq1  AAGGAAGGAAGGACGGACAGAAGGAAGAGATAGTAAGAAAGAAAGAAAGA  1000
       |||||||| |||||||||||    ||||||||||||||   ||||||| 
seq2  -AGGAAGGATGGACGGACAGA---GAGAGATAGTAAGAA--GAAGAAAG-  991

seq1  AAGAGAAAGGAAGGAAGGAAGGGAAAGAGAGAAAGAGAGAGAAAGGAAGG  1050
      |||||||||||||||  ||  |||||||||| |||||||||||  |||||
seq2  AAGAGAAAGGAAGGA--GA--GGAAAGAGAG-AAGAGAGAGAA--GAAGG  1034

seq1  AGAGAAGGGAGAGAGAAAGAAAGAAAGAAAATCTTTCAGGCTAGGAAAAT  1100
      |||||  |||||||||| |  ||||   ||||||||||||||||   |||
seq2  AGAGA--GGAGAGAGAAGG--AGAA--GAAATCTTTCAGGCTAG---AAT  1075

seq1  GTCTTAGCAGTAAAATGCAATTTCTTCTACTTCATCTTAGTTTATTTAGG  1150
      |||||||||||  ||||||||||||   |||||| ||||| |||||||||
seq2  GTCTTAGCAGT-GAATGCAATTTCT--CACTTCA-CTTAG-TTATTTAGG  1120

seq1  G  1151
      |
seq2  G  1121