BAC Information

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BAC

Clone NameB6Ng01-334M17
Chromosome2 (Build37)
Map Location 17,975,079 - 18,072,302
singlet/doubletdoublet
Overlap geneMllt10
Upstream geneNebl, LOC100041319, LOC100041047, 1700113O17Rik, A930004D18Rik, 2810030E01Rik
Downstream geneLOC641254, Dnajc1, LOC100041388, LOC623325, LOC625815, Commd3, Bmi1, EG667477, LOC100041448, BC061194, LOC667493, LOC100041479, Pip5k2a, 4930426L09Rik, LOC667521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334M17.bB6Ng01-334M17.g
ACCGA120212GA120213
length4701,001
definitionB6Ng01-334M17.b B6Ng01-334M17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,071,827 - 18,072,302)(17,975,079 - 17,976,075)
sequence
tgatggtaaatcctcatcaaaatattagcaaatcagggctgttcttgcaa
atgaccaggtttcaattcccaaaatgcacctggcaattcacatccttctg
taactccagttccagggtatctgactccaattccagagtatacagacatg
caaatagacaagacaattatacacacaaaataaaataataagttgggttt
ggtagtgcatgcacttaatactagcactcaggaggcagaggcaggggaat
atctgtgagttcaaggccagcctggcctacaaagtgagttccaagacacc
catgactgttacacagagaaaccctatcttgaaaaactgaatggatggat
ggatggatggatggatggatggatggatgactaaggagacacagactacc
agacagatacttatcaaatcaaataatgtatttttattgtttaagacaat
ttttaaatttaaagatattt
gaattcaatgcagcctttataaatttgcaaatccttggaggtaaaggggt
tttgtgaggctttgttctgaagaagccctaagagtgtgctttctaaatga
gacaaaggtaaagctggggaccttagtggatgagattttatgcaggtgag
cactaggcaactcttcagatatgaatactgaatattgcaagctaaacatt
tgtaagcacaggagagaaggttacagattgcattaaattggagtgtggta
caaatcacttccatgatgtaagaaatggccaggccacagtcttcctgctt
ttctcatctcaagggctgtggggaccctagtgaccaaggaaagaatgggg
ggggtacacaagaggagggaagaaaggtgggggaggagtaagacttgatt
tgaatctgcagccacattcccttatctttcctgctatcagccagtttaaa
ggacaccataattatggtagtgataaaacaatgcctgcttatgtgtgctg
aataaataaagaatgcttcagcttaagaatcttttaattccaattaaatg
ctatcagagaaaagccacttttcctactgcaactgcctttccccccaatt
atcttattttgttgcaatattttcctatgagacacatggacctttcacaa
gtgatcctgaacacaggggacaaactcacagaaatgcagagttcatcttc
tcctatcaaataatacacagatcacaggaaccaacattttagtgggatta
cccaagttttttgtttattttacacggaggccaaatttggagaaacaagt
gattatactgagtgttgaggcctagctagggtctgctgaagatacagtaa
aatcctgagcacccagagtaagagggagatgacacagaagcagtgggatg
gttccttggaaagggactcctctggtttcctttcctcttggcttcagccc
aaatctccttccttggaaccctggagccattactgtctcccactttcagc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_18071827_18072302
seq2: B6Ng01-334M17.b_46_521 (reverse)

seq1  AAATATATTTAAATTTAAAAATTGTCTTAAACAATAAAAATACATTATTT  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTTTAAATTTAAAAATTGTCTTAAACAATAAAAATACATTATTT  50

seq1  GATTTGCTAAGTATCTGTCTGTTAGTCTGTCTTTCCTCTGTCATCCATCC  100
      |||||| |||||||||||||| |||||||| | ||||  |||||||||||
seq2  GATTTGATAAGTATCTGTCTGGTAGTCTGTGTCTCCTTAGTCATCCATCC  100

seq1  ATCCATCCATCCATCCATCCATCCATCCATTCAGTTTTTCAAGATAGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCCATCCATCCATCCATCCATCCATTCAGTTTTTCAAGATAGGGT  150

seq1  TTCTCTGTGTAACAGTCATGGGTGTCTTGGAACTCACTTTGTAGGCCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTGTAACAGTCATGGGTGTCTTGGAACTCACTTTGTAGGCCAGG  200

seq1  CTGGCCTTGAACTCACAGATATTCCCCTGCCTCTGCCTCCTGAGTGCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTTGAACTCACAGATATTCCCCTGCCTCTGCCTCCTGAGTGCTAG  250

seq1  TATTAAGTGCATGCACTACCAAACCCAACTTATTATTTTATTTTGTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGTGCATGCACTACCAAACCCAACTTATTATTTTATTTTGTGTGT  300

seq1  ATAATTGTCTTGTCTATTTGCATGTCTGTATACTCTGGAATTGGAGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGTCTTGTCTATTTGCATGTCTGTATACTCTGGAATTGGAGTCAG  350

seq1  ATACCCTGGAACTGGAGTTACAGAAGGATGTGAATTGCCAGGTGCATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCTGGAACTGGAGTTACAGAAGGATGTGAATTGCCAGGTGCATTTT  400

seq1  GGGAATTGAAACCTGGTCATTTGCAAGAACAGCCCTGATTTGCTAATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATTGAAACCTGGTCATTTGCAAGAACAGCCCTGATTTGCTAATATT  450

seq1  TTGATGAGGATTTACCATCAGAATTC  476
      ||||||||||||||||||||||||||
seq2  TTGATGAGGATTTACCATCAGAATTC  476

seq1: chr2_17975079_17976075
seq2: B6Ng01-334M17.g_68_1068

seq1  GAATTCAATGCAGCCTTTATAAATTTGCAAATCCTTGGAGGTAAAGGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCAGCCTTTATAAATTTGCAAATCCTTGGAGGTAAAGGGGT  50

seq1  TTTGTGAGGCTTTGTTCTGAAGAAGCCCTAAGAGTGTGCTTTCTAAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAGGCTTTGTTCTGAAGAAGCCCTAAGAGTGTGCTTTCTAAATGA  100

seq1  GACAAAGGTAAAGCTGGGGACCTTAGTGGATGAGATTTTATGCAGGTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGGTAAAGCTGGGGACCTTAGTGGATGAGATTTTATGCAGGTGAG  150

seq1  CACTAGGCAACTCTTCAGATATGAATACTGAATATTGCAAGCTAAACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGGCAACTCTTCAGATATGAATACTGAATATTGCAAGCTAAACATT  200

seq1  TGTAAGCACAGGAGAGAAGGTTACAGATTGCATTAAATTGGAGTGTGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCACAGGAGAGAAGGTTACAGATTGCATTAAATTGGAGTGTGGTA  250

seq1  CAAATCACTTCCATGATGTAAGAAATGGCCAGGCCACAGTCTTCCTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCACTTCCATGATGTAAGAAATGGCCAGGCCACAGTCTTCCTGCTT  300

seq1  TTCTCATCTCAAGGGCTGTGGGGACCCTAGTGACCAAGGAAAGAATGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATCTCAAGGGCTGTGGGGACCCTAGTGACCAAGGAAAGAATGGGG  350

seq1  GGGGTACACAAGAGGAGGGAAGAAAGGTGGGGGAGGAGTAAGACTTGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTACACAAGAGGAGGGAAGAAAGGTGGGGGAGGAGTAAGACTTGATT  400

seq1  TGAATCTGCAGCCACATTCCCTTATCTTTCCTGCTATCAGCCAGTTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTGCAGCCACATTCCCTTATCTTTCCTGCTATCAGCCAGTTTAAA  450

seq1  GGACACCATAATTATGGTAGTGATAAAACAATGCCTGCTTATGTGTGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCATAATTATGGTAGTGATAAAACAATGCCTGCTTATGTGTGCTG  500

seq1  AATAAATAAAGAATGCTTCAGCTTAAGAATCTTTTAATTCCAATTAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAAGAATGCTTCAGCTTAAGAATCTTTTAATTCCAATTAAATG  550

seq1  CTATCAGAGAAAAGCCACTTTTCCTACTGCAACTGCCTTTCCCCCCAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGAGAAAAGCCACTTTTCCTACTGCAACTGCCTTTCCCCCCAATT  600

seq1  ATCTTATTTTGTTGCAATATTTTCCTATGAGACACATGGACCTTTCACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATTTTGTTGCAATATTTTCCTATGAGACACATGGACCTTTCACAA  650

seq1  GTGATCCTGAACACAGGGGACAAACTCACAG-AATGCAGAGTTCATCTTC  699
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTGATCCTGAACACAGGGGACAAACTCACAGAAATGCAGAGTTCATCTTC  700

seq1  TCCTATCAAATAATACACAGATCACAGGAACCAACA-TTTAGTGGGATTA  748
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCCTATCAAATAATACACAGATCACAGGAACCAACATTTTAGTGGGATTA  750

seq1  CCCAAGTTTTTTGTTTATTTTACACGGAGGCCAAATTTGGAGAAACAAGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTTTTTTGTTTATTTTACACGGAGGCCAAATTTGGAGAAACAAGT  800

seq1  GATTATACTGAGTGTTGAGGCCTAGCTAGGGTCTGCTGAAGATACAGTAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATACTGAGTGTTGAGGCCTAGCTAGGGTCTGCTGAAGATACAGTAA  850

seq1  AATCCTGAGCACCCAGAGTAAGAGGGAGATGACACAGAAGCAGTGGGATG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGAGCACCCAGAGTAAGAGGGAGATGACACAGAAGCAGTGGGATG  900

seq1  G-TCCCTGGAAAGGGACTCCTCTGG-TTCCGTTCC-CTTGGCTTCAGCCC  945
      | ||| ||||||||||||||||||| |||| |||| ||||||||||||||
seq2  GTTCCTTGGAAAGGGACTCCTCTGGTTTCCTTTCCTCTTGGCTTCAGCCC  950

seq1  AAATCCTCCTCCTTGGAACCCTGGAGCCAATCACTGTCTTCCACTTTCAG  995
      |||||  | ||||||||||||||||||| || ||||||| ||||||||||
seq2  AAATCTCCTTCCTTGGAACCCTGGAGCC-ATTACTGTCTCCCACTTTCAG  999

seq1  CT  997
      ||
seq2  CT  1001