BAC Information

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BAC

Clone NameB6Ng01-336O24
Chromosome2 (Build37)
Map Location 33,190,713 - 33,287,264
singlet/doubletdoublet
Overlap geneRalgps1, Zbtb34
Upstream geneDnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1, 1700019L03Rik, Stxbp1, 9130404D14Rik, Lrsam1, Snora65, Slc2a8, Garnl3, Angptl2
Downstream geneZbtb43, LOC676764, Lmx1b, LOC100041918, 2610528K11Rik, LOC100041931, Pbx3, LOC665948
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336O24.bB6Ng01-336O24.g
ACCGA121713GA121714
length908719
definitionB6Ng01-336O24.b B6Ng01-336O24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,190,713 - 33,191,614)(33,286,546 - 33,287,264)
sequence
gaattctttcagtccatatgtttagtaagcacctattatcagcacatttt
ggacacaaaaactcgagagacatgtcaggtcctgtccctaggttcatcct
ccagtgcaggaaacagtgataaagcaggtcacacagcaatgttatatcaa
gtagtaactgttgttctgaaaagcacaagcaggaggagagcgatgacggc
cctgtcagcccaggcaagcctcacagaggacgatggaaacacagagaggc
tgaggacacagcgaggctgaggctggaggctgtgagagtggattggaaat
atggctagaatatagctgcagaggcaaggaaggggcaggagaagacatgg
ccagactctagggcaggatactgcaggcctcaggagtaaggctggagcaa
tgagccattggaatgagaactgactgttgtttaagatttattttaaagta
tgtgtgtgggggcagggtaggggggtattcctatagaagccagagagttg
ggtttccaggtactagagttacagagagttgtgaactagccacctgacac
gggtacaggaacagaacttaaatcctctacaaaagtgatgcacactttaa
cctcttaactactgtgccatctctccagaacttttagacatactgaaggc
tctctctgcagagcctgactaaatgaatatggaagcccaagatggcacag
ctgcaaagtgtgggatcattggcatggccctgtagttggcatggatcctc
catacagtgggagaccagagagaagtgggcatgtcaaggaacagccaatg
ctctgcagagaaacacagcccttggaacagtttctcaaaatcacgcttga
agtcacccagtgcccagcattccccaagggaaaggaaagcatttatggga
tgccagct
gaattctgttttttaagaccttgtctcaaggcaagaccctaaaataataa
aaatagaaataaagaacttaaaaagcatggcttagcaggtcgtaggtgtg
gggctttccacaggcttagggtccgggtgcacacggtcgagtcctgctcc
ggccagcaggtggagccaaggagaaggcgggcggaaggccacgggccgca
gagtcgggatttcaggctccaaacccgggttgctgttcagctacccgccc
gtctactggtcggcctgcagcactagccaggagctgggattccgaccggc
ccgccgcgagaagtccggccatatcgacacccgcccgggtccgcgcctgc
ccggaagcgcgggcgccgagggggcggggcctggaagcgcttccgggggc
ggggggcgcgggcaggggcggcagcgggagcggcggggaatggcctggcg
ccggcggcggcggcggcggagggggcgccgcgggcgggcgatgtgaacgc
ggcgcgcggcccaggtgaggctggcgggctgcgggcagaggcggcagggt
cggggcgacccgtggggcggctgtccgacctcctccgtgagctcggcggg
acgggggagaggctgcctggtcagtgtcagggtcggctgggcgggtcttg
aggcccgggcacctgccggaggcaggggcttggccccgaggggtgggcga
acccggggcatctgccctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_33190713_33191614
seq2: B6Ng01-336O24.b_47_954

seq1  GAATTCTTTCAGTCCATATGTTTAGTAAGCACCTATTATCAGCACATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGTCCATATGTTTAGTAAGCACCTATTATCAGCACATTTT  50

seq1  GGACACAAAAACTCGAGAGACATGTCAGGTCCTGTCCCTAGGTTCATCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAAAAACTCGAGAGACATGTCAGGTCCTGTCCCTAGGTTCATCCT  100

seq1  CCAGTGCAGGAAACAGTGATAAAGCAGGTCACACAGCAATGTTATATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGCAGGAAACAGTGATAAAGCAGGTCACACAGCAATGTTATATCAA  150

seq1  GTAGTAACTGTTGTTCTGAAAAGCACAAGCAGGAGGAGAGCGATGACGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAACTGTTGTTCTGAAAAGCACAAGCAGGAGGAGAGCGATGACGGC  200

seq1  CCTGTCAGCCCAGGCAAGCCTCACAGAGGACGATGGAAACACAGAGAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAGCCCAGGCAAGCCTCACAGAGGACGATGGAAACACAGAGAGGC  250

seq1  TGAGGACACAGCGAGGCTGAGGCTGGAGGCTGTGAGAGTGGATTGGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACACAGCGAGGCTGAGGCTGGAGGCTGTGAGAGTGGATTGGAAAT  300

seq1  ATGGCTAGAATATAGCTGCAGAGGCAAGGAAGGGGCAGGAGAAGACATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTAGAATATAGCTGCAGAGGCAAGGAAGGGGCAGGAGAAGACATGG  350

seq1  CCAGACTCTAGGGCAGGATACTGCAGGCCTCAGGAGTAAGGCTGGAGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTCTAGGGCAGGATACTGCAGGCCTCAGGAGTAAGGCTGGAGCAA  400

seq1  TGAGCCATTGGAATGAGAACTGACTGTTGTTTAAGATTTATTTTAAAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCATTGGAATGAGAACTGACTGTTGTTTAAGATTTATTTTAAAGTA  450

seq1  TGTGTGTGGGGGCAGGGTAGGGGGGTATTCCTATAGAAGCCAGAGAGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGGGGGCAGGGTAGGGGGGTATTCCTATAGAAGCCAGAGAGTTG  500

seq1  GGTTTCCAGGTACTAGAGTTACAGAGAGTTGTGAACTAGCCACCTGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCAGGTACTAGAGTTACAGAGAGTTGTGAACTAGCCACCTGACAC  550

seq1  GGGTACAGGAACAGAACTTAAATCCTCTACAAAAGTGATGCACACTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACAGGAACAGAACTTAAATCCTCTACAAAAGTGATGCACACTTTAA  600

seq1  CCTCTTAACTACTGTGCCATCTCTCCAGAACTTTTAGACATACTGAAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTAACTACTGTGCCATCTCTCCAGAACTTTTAGACATACTGAAGGC  650

seq1  TCTCTCTGCAGAGCCTGACTAAATGAATATGGAAGCCCAAGATGGCACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGCAGAGCCTGACTAAATGAATATGGAAGCCCAAGATGGCACAG  700

seq1  CTGCAAAGTGT-GGATCATTGGCATGGCCCTGTAGTTGGCATGGATCCTC  749
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAGTGTGGGATCATTGGCATGGCCCTGTAGTTGGCATGGATCCTC  750

seq1  CATACAGTGGGAGACCAGAAAGAAGTGGGCATGTCAAGGAACAGCCAATG  799
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CATACAGTGGGAGACCAGAGAGAAGTGGGCATGTCAAGGAACAGCCAATG  800

seq1  CTCTGCAGAGAAACACAGCCCTTGGAACAG-TTCTCAAAATCAGGCTTGA  848
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  CTCTGCAGAGAAACACAGCCCTTGGAACAGTTTCTCAAAATCACGCTTGA  850

seq1  AGTCACCCAGTG-CCAGCATTCCCCAAGGGAA--GGAAGCA-TTATGGGA  894
      |||||||||||| |||||||||||||||||||  | ||||| ||||||||
seq2  AGTCACCCAGTGCCCAGCATTCCCCAAGGGAAAGGAAAGCATTTATGGGA  900

seq1  TGCCAGCT  902
      ||||||||
seq2  TGCCAGCT  908

seq1: chr2_33286546_33287264
seq2: B6Ng01-336O24.g_69_787 (reverse)

seq1  CAGGGCAGCTGCCCCGGG-TCG-CCACCCCTCGGGGCCAAGCGCCTGGCC  48
      |||||||| ||||||||| ||| ||||||||||||||||||| ||| |||
seq2  CAGGGCAGATGCCCCGGGTTCGCCCACCCCTCGGGGCCAAGCCCCT-GCC  49

seq1  TCCGGCAGGTGCCCGGGCCTCAAGACCCCGCCCGGCCGGCCCCGACACTG  98
      ||||||||||||||||||||||||| ||||||| |||| ||| |||||||
seq2  TCCGGCAGGTGCCCGGGCCTCAAGA-CCCGCCCAGCCGACCCTGACACTG  98

seq1  ACCAGGCAGCCTCTCCCCCGTCCCGCCGCGCTCACGGGGGAGGTCGGACA  148
      |||||||||||||||||||||||||||| |||||||| ||||||||||||
seq2  ACCAGGCAGCCTCTCCCCCGTCCCGCCGAGCTCACGGAGGAGGTCGGACA  148

seq1  GCCGCCCCACGGGTCGCCCCGACCCTGCCGCCTCTGCCCGCAGCCCGCCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCCCCACGGGTCGCCCCGACCCTGCCGCCTCTGCCCGCAGCCCGCCA  198

seq1  GCCTCACCTGGGCCGCGCGCCGCGTTCACATCGCCCGCCCGCGGCGCCCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACCTGGGCCGCGCGCCGCGTTCACATCGCCCGCCCGCGGCGCCCC  248

seq1  CTCCGCCGCCGCCGCCGCCGGCGCCAGGCCCTTCCCCGCCGCTCCCGCTG  298
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTCCGCCGCCGCCGCCGCCGGCGCCAGGCCATTCCCCGCCGCTCCCGCTG  298

seq1  CCGCCCCTGCCCGCGCCCCCCGCCCCCGGAAGCGCTTCCAGGCCCCGCCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCCCTGCCCGCGCCCCCCGCCCCCGGAAGCGCTTCCAGGCCCCGCCC  348

seq1  CCTCGGCGCCCGCGCTTCCGGGCAGGCGCGGACCCGGGCGGGTGTCGATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGCGCCCGCGCTTCCGGGCAGGCGCGGACCCGGGCGGGTGTCGATA  398

seq1  TGGCCGGACTTCTCGCGGCGGGCCGGTCGGAATCCCAGCTCCTGGCTAGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGGACTTCTCGCGGCGGGCCGGTCGGAATCCCAGCTCCTGGCTAGT  448

seq1  GCTGCAGGCCGACCAGTAGACGGGCGGGTAGCTGAACAGCAACCCGGGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGGCCGACCAGTAGACGGGCGGGTAGCTGAACAGCAACCCGGGTT  498

seq1  TGGAGCCTGAAATCCCGACTCTGCGGCCCGTGGCCTTCCGCCCGCCTTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCCTGAAATCCCGACTCTGCGGCCCGTGGCCTTCCGCCCGCCTTCT  548

seq1  CCTTGGCTCCACCTGCTGGCCGGAGCAGGACTCGACCGTGTGCACCCGGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCTCCACCTGCTGGCCGGAGCAGGACTCGACCGTGTGCACCCGGA  598

seq1  CCCTAAGCCTGTGGAAAGCCCCACACCTACGACCTGCTAAGCCATGCTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGCCTGTGGAAAGCCCCACACCTACGACCTGCTAAGCCATGCTTT  648

seq1  TTAAGTTCTTTATTTCTATTTTTATTATTTTAGGGTCTTGCCTTGAGACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTCTTTATTTCTATTTTTATTATTTTAGGGTCTTGCCTTGAGACA  698

seq1  AGGTCTTAAAAAACAGAATTC  719
      |||||||||||||||||||||
seq2  AGGTCTTAAAAAACAGAATTC  719