BAC Information

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BAC

Clone NameB6Ng01-341D04
Chromosome2 (Build37)
Map Location 120,168,016 - 120,168,946
singlet/doubletsinglet
Overlap geneVps39
Upstream geneChac1, Inoc1, LOC100043612, Exdl1, 1500003O03Rik, LOC100043307, Oip5, Nusap1, Ndufaf1, LOC625328, LOC100043622, Rtf1, Itpka, Ltk, Rpap1, Tyro3, 6330405D24Rik, LOC625403, Mga, Mapkbp1, Pla2g4b, Spnb5, Ehd4, Pla2g4e, LOC100043635, Pla2g4d, Pla2g4f
Downstream geneTmem87a, Ganc, Capn3, Zfp106, Snap23, Lrrc57, Cep27, Stard9, Cdan1, Ttbk2, Ubr1, Tmem62, Rnu3b-ps2, Ccndbp1, Epb4.2, Tgm5, LOC640543, Lcmt2, Adal, Zscan29, D2Ertd435e, Trp53bp1, Mtap1a, Hisppd2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341D04.bB6Ng01-341D04.g
ACCGA124656GA124657
length931591
definitionB6Ng01-341D04.b B6Ng01-341D04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacgaactgcaggtaacgtccactgtgcctgctgtgcaggcagg
gtgggagctggcactgtagctagcctcgagcctcctggttagatctagtt
agccccggcttgagcctcctggttagatctagttagccccggcttgagcc
tcctggttagatctagttaaccccagcttgaggttctccccaggcagaca
ctgatgcagagtcctaggcctgcttatttgtgcccacaattccacagcat
tcctgcactttatcttgtctcttctaagggaacctttcctgcactttttc
cagttcctgggtgatttatattcttattagggtgactcatattgtttatt
ggttggttggttttcttttgttattgttttgagacaggatctctaggtag
ctctggatttcttggaacttgataatgtagaccaggctggccttgaactc
acagaaatctgcctgcctttgcctcccaagtgctagaactaagcccagac
cttatttgtattttatttatatagttcttcaagaattgtgctcagcacta
acggcagacactattgcatacaccagcagaattttgctgaaaggaccctg
atatagctgtctcctgtgaggctatactagtgcctggcaaatacagaagt
ggatgctcacagtcatctataggatggaacagagggcccccaatgtagga
gctagagaaagtacctaagagctgaaagggtctgcaaccctataggtgga
acaacaatatgaactaaccagtacccccgagctcgtgtctctagctgcat
atgtagcagaagatggcctagtcagccatcattgggaatagaggcccctt
ggtctagcaaacttgatatgccccagtacaggggaacaccagggccaaga
ggtgggagtaagtgggtaggggagcagggcg
gaattcaagaaggaagaccatagtgtggattcttcgatccatcttagaag
gggggaacaaaacacccatggaaggagttacagagacaaagtgtggagta
aagactgaagaaatgaccatccagagactgactcatctggggagccatcc
catttacaatcaccaaacccagacactgttgtggatgccaacaagtgctt
gctgacaggagcctgatatagctgtctcctgagaggctctgctagtgcct
cacaaatacagaggtggatgctcacagccatccattggactgagcatagg
gtccccaatgaaggagctagagaaagtacccaaggagctgaaggggtttg
cagccccataggaggaacaacaatatgaactagccagtatccccagagct
cccagagactaaaccaccaactaaagaacacacatggtgggactcatggc
tccagctatatacgcagcagaggatgtcctagtcagacatcaatggggag
agaggacctttgttctatgaaggttctatgccccaatgtgggggaatagc
agggccaggaagcaggagtgggtgggttgatgagcagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_120168016_120168946
seq2: B6Ng01-341D04.b_46_976 (reverse)

seq1  CGCCCTGCTCCCCTACCCACTTACTCCCACCTCTTGGCCCTGGTGTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCTGCTCCCCTACCCACTTACTCCCACCTCTTGGCCCTGGTGTTCCC  50

seq1  CTGTACTGGGGCATATCAAGTTTGCTAGACCAAGGGGCCTCTATTCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTGGGGCATATCAAGTTTGCTAGACCAAGGGGCCTCTATTCCCAA  100

seq1  TGATGGCTGACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCTGACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACGAG  150

seq1  CTCGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAG  200

seq1  ACCCTTTCAGCTCTTAGGTACTTTCTCTAGCTCCTACATTGGGGGCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTCAGCTCTTAGGTACTTTCTCTAGCTCCTACATTGGGGGCCCTC  250

seq1  TGTTCCATCCTATAGATGACTGTGAGCATCCACTTCTGTATTTGCCAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCATCCTATAGATGACTGTGAGCATCCACTTCTGTATTTGCCAGGC  300

seq1  ACTAGTATAGCCTCACAGGAGACAGCTATATCAGGGTCCTTTCAGCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTATAGCCTCACAGGAGACAGCTATATCAGGGTCCTTTCAGCAAAA  350

seq1  TTCTGCTGGTGTATGCAATAGTGTCTGCCGTTAGTGCTGAGCACAATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTGGTGTATGCAATAGTGTCTGCCGTTAGTGCTGAGCACAATTCT  400

seq1  TGAAGAACTATATAAATAAAATACAAATAAGGTCTGGGCTTAGTTCTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAACTATATAAATAAAATACAAATAAGGTCTGGGCTTAGTTCTAGC  450

seq1  ACTTGGGAGGCAAAGGCAGGCAGATTTCTGTGAGTTCAAGGCCAGCCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGAGGCAAAGGCAGGCAGATTTCTGTGAGTTCAAGGCCAGCCTGG  500

seq1  TCTACATTATCAAGTTCCAAGAAATCCAGAGCTACCTAGAGATCCTGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATTATCAAGTTCCAAGAAATCCAGAGCTACCTAGAGATCCTGTCT  550

seq1  CAAAACAATAACAAAAGAAAACCAACCAACCAATAAACAATATGAGTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAATAACAAAAGAAAACCAACCAACCAATAAACAATATGAGTCAC  600

seq1  CCTAATAAGAATATAAATCACCCAGGAACTGGAAAAAGTGCAGGAAAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATAAGAATATAAATCACCCAGGAACTGGAAAAAGTGCAGGAAAGGT  650

seq1  TCCCTTAGAAGAGACAAGATAAAGTGCAGGAATGCTGTGGAATTGTGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTAGAAGAGACAAGATAAAGTGCAGGAATGCTGTGGAATTGTGGGC  700

seq1  ACAAATAAGCAGGCCTAGGACTCTGCATCAGTGTCTGCCTGGGGAGAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAAGCAGGCCTAGGACTCTGCATCAGTGTCTGCCTGGGGAGAACC  750

seq1  TCAAGCTGGGGTTAACTAGATCTAACCAGGAGGCTCAAGCCGGGGCTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCTGGGGTTAACTAGATCTAACCAGGAGGCTCAAGCCGGGGCTAAC  800

seq1  TAGATCTAACCAGGAGGCTCAAGCCGGGGCTAACTAGATCTAACCAGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCTAACCAGGAGGCTCAAGCCGGGGCTAACTAGATCTAACCAGGAG  850

seq1  GCTCGAGGCTAGCTACAGTGCCAGCTCCCACCCTGCCTGCACAGCAGGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGAGGCTAGCTACAGTGCCAGCTCCCACCCTGCCTGCACAGCAGGCA  900

seq1  CAGTGGACGTTACCTGCAGTTCGTGGAATTC  931
      |||||||||||||||||||||||||||||||
seq2  CAGTGGACGTTACCTGCAGTTCGTGGAATTC  931