BAC Information

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BAC

Clone NameB6Ng01-341G07
Chromosome2 (Build37)
Map Location 80,874,559 - 80,875,728
singlet/doubletsinglet
Overlap genenone
Upstream genePde1a, LOC668005, Prdx6-rs1, Dnajc10, Frzb, Nckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324, LOC668027, LOC100040624, LOC100040655
Downstream geneLOC100040704
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341G07.bB6Ng01-341G07.g
ACCGA124786GA124787
length3541,164
definitionB6Ng01-341G07.b B6Ng01-341G07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctataaaaattgttattagaaattatgagatccttaatttgtcta
taccactttactacatgagagtacatcattatgttgatcttcagaaaatc
tccccaaatagggtaggctgatgccctggaatccttaagctatgtaatag
tgataggaaaggcttatcagcagcaagaagcaatccttggataaagtctc
ttaatacactgcatttttacagctcacctttcacaggccatgcaaatcaa
tgggccacctccagaaaactcacatgcatgactgcatgcctttagctttt
cctagatggcttctgacaaagatattatgggggtgggggtaggggtgagg
accc

gaattcttgctttaccccaaagcttcagtggtctaaaattcacagtataa
aaatgactacaaaattctgcttttaatgactttgagctggaagggtggag
atgaaatgcaacaagatccatgtataagtcaggagtagaaagagtattgt
agctgatactggaagaaagatatttagccgtcatggagatcactgtctcc
gggccagtatctctaaactgtgcctgactttacctaagggtgcatgtttc
tcactctctgctatgcagatgaacttagcctgggctatgggaatttttca
gaattccataggtgattttaatttgcatctacaattaactacgggtgttc
ctgacatctgtataaaaggtttttattcttaaggtgtatgtgaatcatca
tatggttaacaaacgccaaaaattgtaccttaccccttgacatttctgtt
gaaatgctctgagatggcaccgcatgtttctgaagcatctcgggtgcttc
ccatgtgaaaataggtattccagaatattggcaaggctcagtctgaatgc
cccagagtacagggtgctgaatgtggcagaaaaaaaagagagatagcaga
gatacaacattgaatgcacaagaatcaaggacatggaatctcagtactga
tgtcttatctggactcataggttccttgagcctaggactaaaggaaagag
tgtggaattacaaaccagcttctgaattgcatccatttccagaagagttg
atgatgtggaaatttgcctttggaaattttgttttatcacaagtaaaaat
ataagataccaagggatattcaaattgtagataaagaacaagtacttttt
atgagtaatacatcctgtgtgattcgaatatatttgtattaaataatatg
tcatttggtagaaatggaaactcaattgggactctgcattttatttgata
atcttagaaagctagatttattgattctcaaaggacagtgtgatcttggt
gctgtatttactgtatagagcatccaccatcagtctggaggacagcctga
tggcatgatatctaagaactgtttttcttctccttttaagaacttagact
ctcatctatttacacaattagagggagaacctttgcttgtaagcatagca
ttccaatgtctcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_80874559_80875728
seq2: B6Ng01-341G07.g_67_1230

seq1  GAATTCTTGCTTTACCCCAAAGCTTCAGTGGTCTAAAATTCACAGTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCTTTACCCCAAAGCTTCAGTGGTCTAAAATTCACAGTATAA  50

seq1  AAATGACTACAAAATTCTGCTTTTAATGACTTTGAGCTGGAAGGGTGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACTACAAAATTCTGCTTTTAATGACTTTGAGCTGGAAGGGTGGAG  100

seq1  ATGAAATGCAACAAGATCCATGTATAAGTCAGGAGTAGAAAGAGTATTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATGCAACAAGATCCATGTATAAGTCAGGAGTAGAAAGAGTATTGT  150

seq1  AGCTGATACTGGAAGAAAGATATTTAGCCGTCATGGAGATCACTGTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATACTGGAAGAAAGATATTTAGCCGTCATGGAGATCACTGTCTCC  200

seq1  GGGCCAGTATCTCTAAACTGTGCCTGACTTTACCTAAGGGTGCATGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGTATCTCTAAACTGTGCCTGACTTTACCTAAGGGTGCATGTTTC  250

seq1  TCACTCTCTGCTATGCAGATGAACTTAGCCTGGGCTATGGGAATTTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTCTGCTATGCAGATGAACTTAGCCTGGGCTATGGGAATTTTTCA  300

seq1  GAATTCCATAGGTGATTTTAATTTGCATCTACAATTAACTACGGGTGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGGTGATTTTAATTTGCATCTACAATTAACTACGGGTGTTC  350

seq1  CTGACATCTGTATAAAAGGTTTTTATTCTTAAGGTGTATGTGAATCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATCTGTATAAAAGGTTTTTATTCTTAAGGTGTATGTGAATCATCA  400

seq1  TATGGTTAACAAACGCCAAAAATTGTACCTTACCCCTTGACATTTCTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTAACAAACGCCAAAAATTGTACCTTACCCCTTGACATTTCTGTT  450

seq1  GAAATGCTCTGAGATGGCACCGCATGTTTCTGAAGCATCTCGGGTGCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCTCTGAGATGGCACCGCATGTTTCTGAAGCATCTCGGGTGCTTC  500

seq1  CCATGTGAAAATAGGTATTCCAGAATATTGGCAAGGCTCAGTCTGAATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGAAAATAGGTATTCCAGAATATTGGCAAGGCTCAGTCTGAATGC  550

seq1  CCCAGAGTACAGGGTGCTGAATGTGGCAGAAAAAAAAGAGAGATAGCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGTACAGGGTGCTGAATGTGGCAGAAAAAAAAGAGAGATAGCAGA  600

seq1  GATACAACATTGAATGCACAAGAATCAAGGACATGGAATCTCAGTACTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAACATTGAATGCACAAGAATCAAGGACATGGAATCTCAGTACTGA  650

seq1  TGTCTTATCTGGACTCATAGGTTCCTTGAGCCTAGGACTAAAGGAAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTATCTGGACTCATAGGTTCCTTGAGCCTAGGACTAAAGGAAAGAG  700

seq1  TGTGGAATTACAAACCAGCTTCTGAATTGCATCCATTTCCAGAAGAGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAATTACAAACCAGCTTCTGAATTGCATCCATTTCCAGAAGAGTTG  750

seq1  ATGATGTGGAAATTTGCCTTTGGAAATTTTGTTTTATCACAAGTAAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTGGAAATTTGCCTTTGGAAATTTTGTTTTATCACAAGTAAAAAT  800

seq1  ATAAGATACCAAGGGATATTCAAATTGTAGATAAAGAACAAGTACTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATACCAAGGGATATTCAAATTGTAGATAAAGAACAAGTACTTTTT  850

seq1  ATGAGTAATACATCCTGTGTGATTCGAATATATTTGTATTAAATAATATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTAATACATCCTGTGTGATTCGAATATATTTGTATTAAATAATATG  900

seq1  TCATTTGGTAGAAATGGAAACTCAATTGGGACTCTGCATTTTATTTGATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCATTTGGTAGAAATGGAAACTCAATTGGGACTCTGCATTTTATTTGAT-  949

seq1  AATCTTAGAAAGCTAGAATTTATTGAATTCTCAAAGGACAGTGTGATCTT  1000
      |||||||||||||||| |||||||| ||||||||||||||||||||||||
seq2  AATCTTAGAAAGCTAG-ATTTATTG-ATTCTCAAAGGACAGTGTGATCTT  997

seq1  GGTGCTGTATTTTAACTGTATAGAGCATCCACCATCAGTCCTGAGGGACA  1050
      ||||||||||||  ||||||||||||||||||||||||| |||  |||||
seq2  GGTGCTGTATTT--ACTGTATAGAGCATCCACCATCAGT-CTGGAGGACA  1044

seq1  GCCTGATGGCATGAATATCTAAG-ACTGTTTTTTCTTCT-CTTTTAAGAC  1098
      ||||||||||||| ||||||||| |||| |||||||||| ||||||||| 
seq2  GCCTGATGGCATG-ATATCTAAGAACTG-TTTTTCTTCTCCTTTTAAGAA  1092

seq1  TCTAGACTCT--ACTATTTACACAATAAGAGGGAG-ACATTTGTTTGTAA  1145
        ||||||||   ||||||||||||| |||||||| || |||| ||||||
seq2  CTTAGACTCTCATCTATTTACACAATTAGAGGGAGAACCTTTGCTTGTAA  1142

seq1  GCATAAGCATTTCCAAATGTCTCTA  1170
      |||| ||||||  | ||||||||||
seq2  GCAT-AGCATT--CCAATGTCTCTA  1164


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