BAC Information

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BAC

Clone NameB6Ng01-342I20
Chromosome2 (Build37)
Map Location 150,681,656 - 150,682,439
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000015750, LOC279056, Zfp120, EG245174, 3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605, Pygb, Abhd12
Downstream geneGins1, LOC668925, 4930519N13Rik, LOC668926, Nanp, LOC433486, LOC381390, 4930442J19Rik, LOC100043839, LOC100043840, 4921509C19Rik, Nsfl1c, Fkbp1a, Sdcbp2, Snph, LOC668929, BC052486, 5430405G05Rik, Psmf1, Rspo4
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342I20.bB6Ng01-342I20.g
ACCGA125602GA125603
length1,0101,205
definitionB6Ng01-342I20.b B6Ng01-342I20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattcccagcaaccacataatggctcacaaccatctgtaatgga
tccagtgacctcttctggtgtctgaagacaggtacggtgtactcatgtac
ataaaataaataaatctttaaaaaaagagatggctctggtgcaggcttgg
tttggggttgtattgattttgaagtagtcggacttaaacccagggtctcg
cctgctgcatgagcactgtagcagtgaaccccttccctgggcagtgtttc
tgaagggatgataagataaaaatctgtctctgggtttctgggttgttttg
tttttaaattacttgagctagggaggaggttcagtggataaagtgcttgg
tgctcaagaataaggatctaaaattggatccctagcacccacataaaaag
ctgtgtggtggcactgtaaccctggtgctgagtagtggagacaggctgat
cccgggctcacctactaaccagcttagctgaaaatgggtaagcgccaggt
cgagcaagagattctgtttcaaaaactaaggtggagtctgagcatgggga
tgcacgcagtttaccccagcacatggaaggcagaggcaggtgcagctctg
taagtcatttggtcaagataatgaattccaggccagccagatagtgagac
tttctcctcccacaaaagtagaaaagtgattaagaaagatatcctgacat
taatctttagcctctgcttgagcaagcatggctacacacacacacacaca
ctcacttgtatgtgaccatagtgtagctcacaatatatatacacagacac
acatagtcatacacacaaactcacacaatcacatactcacacatacatac
acacacatacgcatagacacacatacatccactcacacatacacatttac
acgctcatacacatacatacaatgaatacacagcatacacatacttacat
tactcatacacaccacatataccatatacactcacatacactacactcat
acacactcat

gaattctctcttgctcttcggttgttaaaagcatctgtaaccgctgttga
cagtaatcccaagtaggctgatgagagaacataaggaactccgccaaccc
tgtgaggcgttggggatcctgagaaagggggtggttagttttccagttat
aaataccagcagaggaaaatgaccagtactgaagggtttaaagtttgggc
gggtccaccagagtccgcccggactctgctctgtgggtcgctgtggctct
atgtactcacagcggtccgcctctcaacgccccgaggggtttggggttcc
ctcggcggctggggtcgaggctgtggataaggggaaggttgtggactagg
ccactcaggaggctttatagattttagaggagccgatttagctggtggct
ccaattcaggagaagccttcaatttctcttgtaacatgagagcacaacca
caattttgagaagcaaaacccaattttaacagtgtaaacaatctagtttc
tttaaaaatgaactccaaaaacattacttgctacaaagtttggctgtccg
ttcctgcacacaaacacaagaaggtgtagccgccaatatatctcaaagac
actaccctaaatcttatcttttataaatcagatttctaggataagaatta
cacagaatattacccaattcaggcgtatctttagagacctgttcccatgg
gttgtctcatgctgcatgttgtagtttctaaattactctaacccagagtt
accagttttaagtcaacttttttgttaccaatgttacaaatttttaatca
taaccaataacttatgagccactaatctataaccaagacatataaaacat
atttatacttttgaaactattttagaaacaaaaatgaaatggccatatac
attttgcccatttaaaccaaaacaaaaattcttaatttttttttcttagc
tgtattttcaagaagaaggagcaactttgtcactgaatgaaatccaattt
ttggtaaggaaaaacagccatctggtcccctttaccatagaactttgaga
aagctgctggtcctattaagaaacagcattatatattcaggtgtcttagc
agggcttcccttaagcacaactaggagatccctagctacagggtgccagt
tccaaagaccaaaaaatctgttaattatatttaagtttttattatcccca
gattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_150681656_150682439
seq2: B6Ng01-342I20.b_47_830 (reverse)

seq1  ATTGTGAGCTACACTATGGTCACATACAAGTGAGTGTGTGTGTGTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGAGCTACACTATGGTCACATACAAGTGAGTGTGTGTGTGTGTGTG  50

seq1  TAGCCATGCTTGCTCAAGCAGAGGCTAAAGATTAATGTCAGGATATCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATGCTTGCTCAAGCAGAGGCTAAAGATTAATGTCAGGATATCTTT  100

seq1  CTTAATCACTTTTCTACTTTTGTGGGAGGAGAAAGTCTCACTATCTGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCACTTTTCTACTTTTGTGGGAGGAGAAAGTCTCACTATCTGGCT  150

seq1  GGCCTGGAATTCATTATCTTGACCAAATGACTTACAGAGCTGCACCTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGAATTCATTATCTTGACCAAATGACTTACAGAGCTGCACCTGCC  200

seq1  TCTGCCTTCCATGTGCTGGGGTAAACTGCGTGCATCCCCATGCTCAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTCCATGTGCTGGGGTAAACTGCGTGCATCCCCATGCTCAGACT  250

seq1  CCACCTTAGTTTTTGAAACAGAATCTCTTGCTCGACCTGGCGCTTACCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTAGTTTTTGAAACAGAATCTCTTGCTCGACCTGGCGCTTACCCA  300

seq1  TTTTCAGCTAAGCTGGTTAGTAGGTGAGCCCGGGATCAGCCTGTCTCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGCTAAGCTGGTTAGTAGGTGAGCCCGGGATCAGCCTGTCTCCAC  350

seq1  TACTCAGCACCAGGGTTACAGTGCCACCACACAGCTTTTTATGTGGGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGCACCAGGGTTACAGTGCCACCACACAGCTTTTTATGTGGGTGC  400

seq1  TAGGGATCCAATTTTAGATCCTTATTCTTGAGCACCAAGCACTTTATCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGATCCAATTTTAGATCCTTATTCTTGAGCACCAAGCACTTTATCCA  450

seq1  CTGAACCTCCTCCCTAGCTCAAGTAATTTAAAAACAAAACAACCCAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACCTCCTCCCTAGCTCAAGTAATTTAAAAACAAAACAACCCAGAAA  500

seq1  CCCAGAGACAGATTTTTATCTTATCATCCCTTCAGAAACACTGCCCAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGACAGATTTTTATCTTATCATCCCTTCAGAAACACTGCCCAGGG  550

seq1  AAGGGGTTCACTGCTACAGTGCTCATGCAGCAGGCGAGACCCTGGGTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGTTCACTGCTACAGTGCTCATGCAGCAGGCGAGACCCTGGGTTTA  600

seq1  AGTCCGACTACTTCAAAATCAATACAACCCCAAACCAAGCCTGCACCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCGACTACTTCAAAATCAATACAACCCCAAACCAAGCCTGCACCAGA  650

seq1  GCCATCTCTTTTTTTAAAGATTTATTTATTTTATGTACATGAGTACACCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTCTTTTTTTAAAGATTTATTTATTTTATGTACATGAGTACACCG  700

seq1  TACCTGTCTTCAGACACCAGAAGAGGTCACTGGATCCATTACAGATGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTCTTCAGACACCAGAAGAGGTCACTGGATCCATTACAGATGGTT  750

seq1  GTGAGCCATTATGTGGTTGCTGGGAATTGAATTC  784
      ||||||||||||||||||||||||||||||||||
seq2  GTGAGCCATTATGTGGTTGCTGGGAATTGAATTC  784


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