BAC Information

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BAC

Clone NameB6Ng01-343I20
Chromosome2 (Build37)
Map Location 82,557,507 - 82,558,673
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp804a, LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292
Downstream geneLOC433440, Fsip2, LOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343I20.bB6Ng01-343I20.g
ACCGA126299GA126300
length1,1551,183
definitionB6Ng01-343I20.b B6Ng01-343I20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgcaatcatgaactcacaacaactatgtttgccagaactgga
tctgctaaagtctaggcttctcaacccttcagccttggattgggaagaat
gttataaataaaaccccatgtcatatatattgcatattgcagagattaaa
aacaaaaaaaagaaaaaggataaagaatgaacaggagaaaaatggtacat
tgagaaagttgacagaaatatgataacttttcttttttttttttaaagat
ttatttattttatgtatataagtacactgtagctctgtcttcagatacac
cagaagagtgcattgaatcccattacagatgtttgtgagccaccatgtgg
tttctgggaattagacccaggacatctggaagagcagtcagtgtacttaa
cccatgagccatgtgcagttcagcccatgatagcctttcaatgtatgtgt
cccttgaaataactggactaaatctgactcaaatatttaataaattttgt
cttatctcattttaaaggaaacaaactaaaaacaaaattctcagaaaaca
aaaaactacacttatgacaaagattctacaaggcaaattaattgattaaa
actttgtgattgcagtgagtttgaatgttgcagattcagagtcaaattaa
cttgagctgattttagttccagtagtagatgttcattgtccacatctgca
ctgatctaacatcagtacaacctttggaaacattaacttagcagaacatg
tctacctagaattaggaatgccagtggttagcatctgatatctgaggtgg
tatcaagagacaggaagaattatttgcatatgggaagagaatggacccac
ttacccagaagtctaagtggtatctcttctagctgagaagcaggaattct
aatacagttaactctgtaaagcctttgtgccttcactactaagcatatgt
tctaagcctcttgtgtaaaattagtggttctgggtttattatacttagtc
agatataattaattcaagaattttgggaagaacatattattctctattta
tcagagaggaaaagagaagactttctagcattcttggagtaccactagat
gttaacatatctaagctgaatgtctcacactctttcttacaatctagcaa
tgcct
gaattccacataaaaccagagacactaaaacttatagaggagaaagtagg
gaaaagcctcgaaaatatgggcagaggggaaaaattcttgaatagaactc
caatagcttgtgctgtaagatcgagaatcgacaaatgggacctcataaaa
ttgcaaagcttatgcaaggcaaaagacaccgtcaatgagataaaaaggcc
accaacagactgggataggatctttacctatcctaaataagataggggac
taatatccaacatatataaagaactcaagaaggtggactccagaaaatca
aataaccccattaaaaaatggggctcacagctcaacaaagaattctcacc
tgaggaatagagaatggctgagaagcaccttaaaaatgttcaacatcctt
aattatcagggaaatacaaatcaaaacaaccctgagtttctacctcacac
cagtcagaatggctaagatcaaaaattctggtgaaggcagatgctgtgga
ggatgtggagaaagaggaacactcctccattgttggtggaattgcaagct
tgtacaacgactctggaaatcagtcttgcagttcctcagaaaattggaca
gagtactagtggaggatcccgcaatacctctcctggtcatatacgcagaa
gatgtttctactggtaagaaggacacatgccccactatgttcatagcagc
cttatttataatagccagaagctggaaagaacacagatgcccctcaacag
aggaatggatacagaaaatgtggtacataatggaatattactcagctatt
aaaaagaatgaatttatgaaattcctaggcaaatggatggacctggaggg
catcatcctgagtgaggtaacacattcacaaaagaactcacacaatatat
actcactgataagtggatattatcccagaacttagaatacccagatatag
atacatttgcaaaacacatgaactcagagacatgatcaaagtatggacac
ttgcccttctagatggacaaataccatggagagtaagagacaagtttgga
gctgagaacaaagatggacatctagagactgcatattctgggatccacca
taatcagctcaagcttgaaccatgcatactagtcagagttgctgaaagaa
ctcggattataggccgtgtccctccggagacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_82557507_82558673
seq2: B6Ng01-343I20.b_46_1200 (reverse)

seq1  AGGCATTGCTAAGAATGGGTAGGAAAGAGTGTGAGACATTTCAGCTTTAG  50
      |||||||||| ||| |  ||| |||||||||||||||| |||||| ||||
seq2  AGGCATTGCT-AGATT--GTAAGAAAGAGTGTGAGACA-TTCAGC-TTAG  45

seq1  ATATGTTTAACATCTTAGTGGTACT-CAAGAATTGCTAGAAAGTCTTCTC  99
      ||||| |||||||| |||||||||| |||||| |||||||||||||||||
seq2  ATATG-TTAACATC-TAGTGGTACTCCAAGAA-TGCTAGAAAGTCTTCTC  92

seq1  TTTTTCCTCTCTTGATAAATAGAGAATATAATGTTCTTCCAAAATTTCTT  149
       |||||||||| ||||||||||||||||  |||||||||| ||| ||| |
seq2  -TTTTCCTCTC-TGATAAATAGAGAATAATATGTTCTTCCCAAAATTC-T  139

seq1  TGAATTAATTTATAATCTGACTAAGTATAATAAACCCAGAACCACTAATT  199
      |||||||| |||| ||||||||||||||||||||||||||||||||||||
seq2  TGAATTAA-TTAT-ATCTGACTAAGTATAATAAACCCAGAACCACTAATT  187

seq1  TTACACAAGAGGCTTAGAACATATGCTTAGTAGTGAAGGCACAAAGGCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACAAGAGGCTTAGAACATATGCTTAGTAGTGAAGGCACAAAGGCTT  237

seq1  TACAGAGTTAACTGTATTAGAATTCCTGCTTCTCAGCTAGAAGAGATACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGTTAACTGTATTAGAATTCCTGCTTCTCAGCTAGAAGAGATACC  287

seq1  ACTTAGACTTCTGGGTAAGTGGGTCCATTCTCTTCCCATATGCAAATAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGACTTCTGGGTAAGTGGGTCCATTCTCTTCCCATATGCAAATAAT  337

seq1  TCTTCCTGTCTCTTGATACCACCTCAGATATCAGATGCTAACCACTGGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGTCTCTTGATACCACCTCAGATATCAGATGCTAACCACTGGCA  387

seq1  TTCCTAATTCTAGGTAGACATGTTCTGCTAAGTTAATGTTTCCAAAGGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAATTCTAGGTAGACATGTTCTGCTAAGTTAATGTTTCCAAAGGTT  437

seq1  GTACTGATGTTAGATCAGTGCAGATGTGGACAATGAACATCTACTACTGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGATGTTAGATCAGTGCAGATGTGGACAATGAACATCTACTACTGG  487

seq1  AACTAAAATCAGCTCAAGTTAATTTGACTCTGAATCTGCAACATTCAAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAATCAGCTCAAGTTAATTTGACTCTGAATCTGCAACATTCAAAC  537

seq1  TCACTGCAATCACAAAGTTTTAATCAATTAATTTGCCTTGTAGAATCTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGCAATCACAAAGTTTTAATCAATTAATTTGCCTTGTAGAATCTTT  587

seq1  GTCATAAGTGTAGTTTTTTGTTTTCTGAGAATTTTGTTTTTAGTTTGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAAGTGTAGTTTTTTGTTTTCTGAGAATTTTGTTTTTAGTTTGTTT  637

seq1  CCTTTAAAATGAGATAAGACAAAATTTATTAAATATTTGAGTCAGATTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAATGAGATAAGACAAAATTTATTAAATATTTGAGTCAGATTTA  687

seq1  GTCCAGTTATTTCAAGGGACACATACATTGAAAGGCTATCATGGGCTGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTTATTTCAAGGGACACATACATTGAAAGGCTATCATGGGCTGAA  737

seq1  CTGCACATGGCTCATGGGTTAAGTACACTGACTGCTCTTCCAGATGTCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACATGGCTCATGGGTTAAGTACACTGACTGCTCTTCCAGATGTCCT  787

seq1  GGGTCTAATTCCCAGAAACCACATGGTGGCTCACAAACATCTGTAATGGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTAATTCCCAGAAACCACATGGTGGCTCACAAACATCTGTAATGGG  837

seq1  ATTCAATGCACTCTTCTGGTGTATCTGAAGACAGAGCTACAGTGTACTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATGCACTCTTCTGGTGTATCTGAAGACAGAGCTACAGTGTACTTA  887

seq1  TATACATAAAATAAATAAATCTTTAAAAAAAAAAAAGAAAAGTTATCATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATAAAATAAATAAATCTTTAAAAAAAAAAAAGAAAAGTTATCATA  937

seq1  TTTCTGTCAACTTTCTCAATGTACCATTTTTCTCCTGTTCATTCTTTATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTCAACTTTCTCAATGTACCATTTTTCTCCTGTTCATTCTTTATC  987

seq1  CTTTTTCTTTTTTTTGTTTTTAATCTCTGCAATATGCAATATATATGACA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTTTTTTTTGTTTTTAATCTCTGCAATATGCAATATATATGACA  1037

seq1  TGGGGTTTTATTTATAACATTCTTCCCAATCCAAGGCTGAAGGGTTGAGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTTTATTTATAACATTCTTCCCAATCCAAGGCTGAAGGGTTGAGA  1087

seq1  AGCCTAGACTTTAGCAGATCCAGTTCTGGCAAACATAGTTGTTGTGAGTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGACTTTAGCAGATCCAGTTCTGGCAAACATAGTTGTTGTGAGTT  1137

seq1  CATGATTGCAAAGAATTC  1167
      ||||||||||||||||||
seq2  CATGATTGCAAAGAATTC  1155