BAC Information

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BAC

Clone NameB6Ng01-343M15
Chromosome2 (Build37)
Map Location 99,782,911 - 99,783,943
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621386
Downstream geneLOC668702, LOC100042907, LOC241572, LOC668705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343M15.bB6Ng01-343M15.g
ACCGA126475GA126476
length1,2571,140
definitionB6Ng01-343M15.b B6Ng01-343M15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctggaaagcacagagaggtaaattctgatgctcatcttgctttct
tcttttcttctttacattccgtcttaaatccagcacagagatggtgtcat
tcacattgagaaaggatcttctctattcagttaattctctgaaattgcca
taattgaaatccagattgcatgttctgtcaaactgacaatggaaattaac
tatgacagtcactaattacaggagaggtgagattcatctagaggtaatgg
agcattcctgatatgatcctacttatttcaggattcattatatatttggg
ttttctatgacagattctagttctaaacttcaaggctagtcttgacctta
tcacataccctgtatagtccttgaactaatcaccacactcctgtttcatt
tttgtgactctgtgctttttacagacttctaccatcctacctgtcaattc
tgtactcccattatcccttttagaatgtttgtagatttccctttcttgtc
attattttaattaattaatttacattccagatgctgtccccatcccagta
ctgccccccacagtttctcatcctatttccattccctgttgcctccaaga
gggtgctcctccctaccctgggcatccctgttccctggggcctaagtctc
tccaggattagtcacatcatctccttctgaggccagaccaggcagtcctc
tgttctgtatgtgccaggtaccagatcagcacttgtatgctccctggttg
gtggctcaagctatagcggctcctgggtccaggtcaggtgagattgttgg
acttcctacagggttgcattccccttcagctcactcaatcattcccctaa
tttctccatagatatctcttccttcagtttaaaggttgggtgcaagtatc
tgcatctctctcagtcagctgctgctagggccaatcagaggacagctatg
ttaagttcctgtctgtatcctttcagtaaaatcttgctagtgtatgcaat
ggtgtcagcatttggaagctgattatggggggggatccctggaatatgca
gtcctctacatgggtccatccttcatctcagctccataagttgtttttgt
aactccttccaatgggtttttgtcccaccttctaagagggcataatgtcc
acactcagtcttcatttttagagccataagtccagctagctaaatgaatg
tgtagtcttcaagtctaagctaatggagggataactccacaggacttcct
cctcatg

gaattccagaatgtctttgatttctttctttattcctttttttaacccag
tggtcattgaatatagatttgttcagtttctttgagactgtaggctttct
gttgtttctgttgttgttgaagtccagatataatgcatagtgatctaata
agatgcatagtgttaaatgaagtgaggcttgctttgtgactgagtatata
gtcaattttgagaagactctgtgatgtgctgagaagaagttatattcttt
tgtgtttgggtgaatggacctgtagatatctcttaggtctatttggttca
ttacatttgttcttttcactatttctctattgagtttccatttcaatgac
ctgtccactagtgagagtgggttgttaaactccccccacgatcaatgtgt
ggactttgatgtgtgatttaaactttagtcatgttttttcactaatatgg
gtgccattgaatctggggcatagatgttcaggattgagacttgatttctc
tgtgtgcttatgtcagtacaggaattcagtagaccaagctggacttgaac
tcacagaaatctacctgtgaatttcaaatgctgagtttaaaggtgtgtgc
ccagctttcttgttttagaggattttttcacttatttgttaattaccaaa
tattcagcaaattatatgctaggtgaaatttccaccgagagaaattacct
gtaacataaaaatgaaatattttctactaattaaaacattataatcttgt
ttttttttatttttataccacagctagtctgagattttgacattaacaga
atttgtaatttatccatcattgctgtacatttcagcctgtatgctcatgg
tcaagagtaagctataaatatagattcttagcaaaccaaaaatgtaggaa
tagccttgcaaaaagtatttcagtaaaactgaagtcaggcagagaaaact
actactaactaactacctaaacaaataaataaaacaaaaaatgaaagatg
gatagatttgggtccttgttttcaattgtttcatatacctctagctacaa
atgcaagacaaattttgcagtgtggtacagatggagctgctttccagcat
actctttcacatcagactaaggtacaaaagtcaaccgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_99782911_99783943
seq2: B6Ng01-343M15.g_180_1206

seq1  TTGTTGAAGTCCAGATATAATGCATAGTGATCTAATAAGATGCATAGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAAGTCCAGATATAATGCATAGTGATCTAATAAGATGCATAGTGT  50

seq1  TAAATGAAGTGAGGCTTGCTTTGTGACTGAGTATATAGTCAATTTTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAAGTGAGGCTTGCTTTGTGACTGAGTATATAGTCAATTTTGAGA  100

seq1  AGACTCTGTGATGTGCTGAGAAGAAGTTATATTCTTTTGTGTTTGGGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTGTGATGTGCTGAGAAGAAGTTATATTCTTTTGTGTTTGGGTGA  150

seq1  ATGGACCTGTAGATATCTCTTAGGTCTATTTGGTTCATTACATTTGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACCTGTAGATATCTCTTAGGTCTATTTGGTTCATTACATTTGTTCT  200

seq1  TTTCACTATTTCTCTATTGAGTTTCCATTTCAATGACCTGTCCACTAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTATTTCTCTATTGAGTTTCCATTTCAATGACCTGTCCACTAGTG  250

seq1  AGAGTGGGTTGTTAAACTCCCCCCACGATCAATGTGTGGACTTTGATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGGTTGTTAAACTCCCCCCACGATCAATGTGTGGACTTTGATGTG  300

seq1  TGATTTAAACTTTAGTCATGTTTTTTCACTAATATGGGTGCCATTGAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAAACTTTAGTCATGTTTTTTCACTAATATGGGTGCCATTGAATC  350

seq1  TGGGGCATAGATGTTCAGGATTGAGACTTGATTTCTCTGTGTGCTTATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCATAGATGTTCAGGATTGAGACTTGATTTCTCTGTGTGCTTATGT  400

seq1  CAGTACAGGAATTCAGTAGACCAAGCTGGACTTGAACTCACAGAAATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACAGGAATTCAGTAGACCAAGCTGGACTTGAACTCACAGAAATCTA  450

seq1  CCTGTGAATTTCAAATGCTGAGTTTAAAGGTGTGTGCCCAGCTTTCTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGAATTTCAAATGCTGAGTTTAAAGGTGTGTGCCCAGCTTTCTTGT  500

seq1  TTTAGAGGATTTTTTCACTTATTTGTTAATTACCAAATATTCAGCAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGGATTTTTTCACTTATTTGTTAATTACCAAATATTCAGCAAATT  550

seq1  ATATGCTAGGTGAAATTTCCACCGAGAGAAATTACCTGTAACATAAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTAGGTGAAATTTCCACCGAGAGAAATTACCTGTAACATAAAAAT  600

seq1  GAAATATTTTCTACTAATTAAAACATTATAATCTTGTTTTTTTTTATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATTTTCTACTAATTAAAACATTATAATCTTGTTTTTTTTTATTTT  650

seq1  TATACCACAGCTAGTCTGAGATTTTGACATTAACAGAATTTGTAATTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCACAGCTAGTCTGAGATTTTGACATTAACAGAATTTGTAATTTAT  700

seq1  CCATCATTGCTGTACATTTCAGCCTGTATGCTCATGGTCAAGAGTAAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATTGCTGTACATTTCAGCCTGTATGCTCATGGTCAAGAGTAAGCT  750

seq1  ATAAATATAGATTCTTAGCAAACCAAAAATGTA-GAATAGCCTTGCAAAA  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATAAATATAGATTCTTAGCAAACCAAAAATGTAGGAATAGCCTTGCAAAA  800

seq1  AGTATTTCAGTAAAACTGAAGTCAGGCAGAGAAAAACTACTAACTAACTA  849
      ||||||||||||||||||||||||||||||| ||||||||| ||||||||
seq2  AGTATTTCAGTAAAACTGAAGTCAGGCAGAG-AAAACTACT-ACTAACTA  848

seq1  ACTACCTAAACAAATAAATAAAAACAAAAAAATGAAAGATGGATAGATTT  899
      |||||||||||||||||||||||   ||||||||||||||||||||||||
seq2  ACTACCTAAACAAATAAATAAAA--CAAAAAATGAAAGATGGATAGATTT  896

seq1  GGGTCC-TGTTTTCAATTGTTTCATATA-CTCTAGCTAACAAATTGCAAG  947
      |||||| ||||||||||||||||||||| |||||||| ||||| ||||||
seq2  GGGTCCTTGTTTTCAATTGTTTCATATACCTCTAGCT-ACAAA-TGCAAG  944

seq1  ACAAATTTTGCAGTGTGGTAACCAGAGGGAGCTGCTTTCCAGCATAACTC  997
      ||||||||||||||||||||  |||| |||||||||||||||||| ||||
seq2  ACAAATTTTGCAGTGTGGTA--CAGATGGAGCTGCTTTCCAGCAT-ACTC  991

seq1  TCAACCATCAGGACCAAAGTACAAAAGTCAA-CGATT  1033
      |    ||||| ||| || ||||||||||||| |||||
seq2  TTTCACATCA-GACTAAGGTACAAAAGTCAACCGATT  1027


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