CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTATCAGACATACAAAGGAAACCTAATATAAATACTCTTCAAACTAT
TCCACAAAATAGGAACAGAAGGAATACTACCAAATTCATTCTATGAAGCC
ACAATTATGCTTATAGCTAAACCAAAGACCCAACAAAGAAATTGTACTTC
AGACCCATTTCCCTTATGAACATCAATGCAAAAATACTCAAAAAAATGAT
CCAAGAACACATCAAAACAATCATCCATAATGATTCAGTAGGCTTCATCC
CAGGCATGCAGGGACAGGATATTGAAGTCCATCAATGTAACCCACGATAT
AAAGAAATTCAATGACAAAATCACATGAAAATCTCATTTGATGCTGAGAA
AGCTTTAACAAAATTCAATACCCCTTCATGATAAAACTCTTGGGAAGATC
AGATATTCAAGACCCATACCTAAACTTAGTCAAATCAATATACAGAAAAC
TAGTACTCAACATCAAACTAAATGGAGAGAAACTTGAAGCAATCCCATTA
AAATCAAGGACCAGACAAGGCTGCCCACTCCCTACCTATTCAATATAGTA
CTCAAATTCTTAGCCAGAGCAATTAGACAAGAAAAGGACTTCAAAGGGAT
ACAAAATTGAAAGGTAGAAGTCAAAATA

CCATGCAGTGGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAATAAAGAGATATAAACATTGATAAAAAGCC
CTGAAATGTCAGAAATGAAAGAAGATAATTGCAACTCAATAAAAGGTTTT
GTGGAGATTCTCATCAACAGGATGGATAAGGACTTAATATCAGGCTTGAA
GACAAGGTAGGATAATTAAAGCATCTAAAAAGGATGAAAGTAGACTAATT
ACAAGGTAAAAGCAGGTGTTTGTGTGTTATGGAACCCTGACTCTATGAAT
CATGGACATAGAAGGAGAATCACATACCACAATCACAGAGAGTATTTTGA
GTAACACCTCAATAGAAAAATCCCCAAATCTAGGGAAAGAAGTGCCAGGT
CAAACAGGAAACTTTTTACAATATTGAACTGAGCAGACCAAGAGACAGTC
TGACCACATCATGTTGTAGCCAAAAACAATAAATAAACAATATTTATTAG
CAATTGGGACATTGGGAGCTTTAAGGGGGGCAACAAAACACCTATAAATA
CAAGCCTTTCAGAACAATAGATTTCTCAAAAGAAACAAAATAAAGGAGTT
TGTAATAGTGAATTTCAAGCTCTGACAATAACTAAGAACTAAATTTTCTT
TGAGGTTTTTTTTAAAGTTTTAGC

Query= MSMg01no045_f22.g1 MSMg01no045_f22.g1 CHROMAT_FILE:
MSMg01no045_f22.g1 PHD_FILE: MSMg01no045_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:18 2005
         (605 letters)



>mm_chr2_123485168_123486172
          Length = 1005

 Score = 1168 bits (604), Expect = 0.0
 Identities = 604/604 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   aataaagagatataaacattgataaaaagccctgaaatgtcagaaatgaaagaagataat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aataaagagatataaacattgataaaaagccctgaaatgtcagaaatgaaagaagataat 745

                                                                       
Query: 61  tgcaactcaataaaaggttttgtggagattctcatcaacaggatggataaggacttaata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgcaactcaataaaaggttttgtggagattctcatcaacaggatggataaggacttaata 685

                                                                       
Query: 121 tcaggcttgaagacaaggtaggataattaaagcatctaaaaaggatgaaagtagactaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcaggcttgaagacaaggtaggataattaaagcatctaaaaaggatgaaagtagactaat 625

                                                                       
Query: 181 tacaaggtaaaagcaggtgtttgtgtgttatggaaccctgactctatgaatcatggacat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tacaaggtaaaagcaggtgtttgtgtgttatggaaccctgactctatgaatcatggacat 565

                                                                       
Query: 241 agaaggagaatcacataccacaatcacagagagtattttgagtaacacctcaatagaaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agaaggagaatcacataccacaatcacagagagtattttgagtaacacctcaatagaaaa 505

                                                                       
Query: 301 atccccaaatctagggaaagaagtgccaggtcaaacaggaaactttttacaatattgaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atccccaaatctagggaaagaagtgccaggtcaaacaggaaactttttacaatattgaac 445

                                                                       
Query: 361 tgagcagaccaagagacagtctgaccacatcatgttgtagccaaaaacaataaataaaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgagcagaccaagagacagtctgaccacatcatgttgtagccaaaaacaataaataaaca 385

                                                                       
Query: 421 atatttattagcaattgggacattgggagctttaaggggggcaacaaaacacctataaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atatttattagcaattgggacattgggagctttaaggggggcaacaaaacacctataaat 325

                                                                       
Query: 481 acaagcctttcagaacaatagatttctcaaaagaaacaaaataaaggagtttgtaatagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acaagcctttcagaacaatagatttctcaaaagaaacaaaataaaggagtttgtaatagt 265

                                                                       
Query: 541 gaatttcaagctctgacaataactaagaactaaattttctttgaggttttttttaaagtt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gaatttcaagctctgacaataactaagaactaaattttctttgaggttttttttaaagtt 205

               
Query: 601 ttag 604
           ||||
Sbjct: 204 ttag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space:   592025
Effective search space used:   592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)