CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCCAAAATTCCCGACCACGCAAAGCTTGTGTCGGAGCTAAGATTT
CATTTAGTCCTTATCTAAATCTTTGAGAGCTTGTTATAAAGAAGCCCTGT
TTGTGGGGGGATATGCTTAAAAGAGGAGATGGTTAAAAACCCTTCCTGCC
CAGAAATCAGGGAGGGGGTCGCTGAGATCGTGATGGAAAACATAGAAGCT
GAAGTTCTTGGATCAATAACTACACGGCGCCTCAGCTGCTTCCTAATGGT
GCTTTATCATGAGCACTGTCTCCTAAAATAGAAAAAATGAGATATTGGTA
CATTTCTCAGTCTTTGTAGTAACTGGATGCCTAACATAGTATTCGTTCCT
TTTGGAAGTTGAGGGAGGAGGTATTTATGAAATTACAAAGTACAGTAACT
CATTACACACCTTCTATGGCTTTCCCTGTAGTTCAGGGAGTGCCGTGGGT
CTTAATCCAGACGAACCCTGTTTTCATGAACATTTTCAGTTTACAGACAT
CTGTCTCAAAAATCAAGACAGGAAAATAAGAGGGGTTGATTATCACACAC
CCTTCCTCATTCTAGTGCAGGAGAGTAGTCGTCACACAGCTAACTCAAAG
GATCATACGAGCCTGTGGAGATAGAGTGCTTTCTGTGCACATCATTCCCA
GGGTAGGCCAGAATTTAA

CCGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAATATGATTGAATCTTTTCTTCTA
CACTTCCAAGCGTAGAGGTGCCTTAAAGTGCACAGTTCTTAATTTGTTGT
TTAACAGTTACTGTTCTCGAACTGGGGGCACACGCCTTTAATCCCAGCAC
TCAGGAGGTAGAGGCAGGTGGATCTCTGTGAGTTCAAGGCCAGCCTGGTC
TATGAAGCAAGTTCTAGGACAGCCAGGCCTACATAAAGAAACTCTGTCTC
AAAAAAACAAAAACAAAATAAAAAAGAATTACTGCTCTCATGCTGAGATA
GTTACTGTGCAGATTTAGAGAAGTAAGATTAGAGAGGTCCGGTGTGTGTG
TGTGTGTGTGTGTGTATGTGTGTGCGCNNCCCAAAAAAAAAAAAAATTTT
TTGGGTGGTGGGCTGCCCTCCTCTTTTTTTTTTCTCCAGTCTTACCTCTC
ATTACCGCTTATTATCTTTGATTTAAAAGTGCACTTTTTTTTCCATTTTC
TACTCTTTTTCCCTCCCTTCACCCCTTTTTTTTTCTTTTTTATAGGCCAA
TTCTCTTTCAAGCCGTCTTCACTTTTTCCTTATTCGTGTTTTCTCTATCA
CTTTTTTACCTTGAAATTTTCTCCTTTGTTTTTTTCCCCCGACAAGCTTT
TGTCAATCTTTTTTTTTACCATCGTTGACGTCCAGGCAACGACCTCCTCG
TATCTTTTTGCCTTCTTCG

Query= MSMg01no047_o10.b1 MSMg01no047_o10.b1 CHROMAT_FILE:
MSMg01no047_o10.b1 PHD_FILE: MSMg01no047_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:19 2005
         (580 letters)



>mm_chr2_69485439_69486418
          Length = 980

 Score = 1091 bits (564), Expect = 0.0
 Identities = 573/576 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctccaaaattcccgaccacgcaaagcttgtgtcggagctaagatttcatttagtc 64
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccaaaactcccgaccacgcaaagcttgtgtcggagctaagatttcatttagtc 264

                                                                       
Query: 65  cttatctaaatctttgagagcttgttataaagaagccctgtttgtggggggatatgctta 124
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 265 cttatctaaatctttgagagcttgttataaagaagccctgtttgtgggggaatatgctta 324

                                                                       
Query: 125 aaagaggagatggttaaaaacccttcctgcccagaaatcagggagggggtcgctgagatc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagaggagatggttaaaaacccttcctgcccagaaatcagggagggggtcgctgagatc 384

                                                                       
Query: 185 gtgatggaaaacatagaagctgaagttcttggatcaataactacacggcgcctcagctgc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgatggaaaacatagaagctgaagttcttggatcaataactacacggcgcctcagctgc 444

                                                                       
Query: 245 ttcctaatggtgctttatcatgagcactgtctcctaaaatagaaaaaatgagatattggt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttcctaatggtgctttatcatgagcactgtctcctaaaatagaaaaaatgagatattggt 504

                                                                       
Query: 305 acatttctcagtctttgtagtaactggatgcctaacatagtattcgttccttttggaagt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acatttctcagtctttgtagtaactggatgcctaacatagtattcgttccttttggaagt 564

                                                                       
Query: 365 tgagggaggaggtatttatgaaattacaaagtacagtaactcattacacaccttctatgg 424
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgagggaggaggtatttgtgaaattacaaagtacagtaactcattacacaccttctatgg 624

                                                                       
Query: 425 ctttccctgtagttcagggagtgccgtgggtcttaatccagacgaaccctgttttcatga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctttccctgtagttcagggagtgccgtgggtcttaatccagacgaaccctgttttcatga 684

                                                                       
Query: 485 acattttcagtttacagacatctgtctcaaaaatcaagacaggaaaataagaggggttga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acattttcagtttacagacatctgtctcaaaaatcaagacaggaaaataagaggggttga 744

                                               
Query: 545 ttatcacacacccttcctcattctagtgcaggagag 580
           ||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttatcacacacccttcctcattctagtgcaggagag 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space:   552900
Effective search space used:   552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)