Query= MSMg01no049_p16.b1 MSMg01no049_p16.b1 CHROMAT_FILE:
MSMg01no049_p16.b1 PHD_FILE: MSMg01no049_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:12:34 2005
(669 letters)
>mm_chr2_91158799_91159867
Length = 1069
Score = 1230 bits (636), Expect = 0.0
Identities = 660/668 (98%)
Strand = Plus / Plus
Query: 1 tcacagagatttgtttcttctgtcagagtgcttcagaatgaactttttatcagcaaaact 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 tcacagagatttgtttcttctgtcagagtgtttcagaatgaactttttatcagcaaaact 260
Query: 61 gtctgatgagaatttaagaaagctgcagagaacaaaatctaaataagttattttcctgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctgatgagaatttaagaaagctgcagagaacaaaatctaaataagttattttcctgag 320
Query: 121 ccttctactgtcagaggcagccatagaataaacaagatgtgagccaaattatgcatttga 180
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttccactctcagaggcagccatagaataaacaagatgtgagccaaattatgcatttga 380
Query: 181 tttgcttaaaatgcattctccttttctaaataaatataaacagaagcagtggctagtgag 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 tttgcttaaaatgcattctccttttctaaataactataaacagaagcagtggctagtgag 440
Query: 241 gttactcactgagagcagccgaacagagacagactaaaagagcaacaacctaggttctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttactcactgagagcagccgaacagagacagactaaaagagcaacaacctaggttctcc 500
Query: 301 atgggcatggtaagtagggaggatgttgccagctggtaggcgtacatataaagagcagcg 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgggcatggtaagtagggaggttgttgccagctggtaggcgtacatataaagagcagcg 560
Query: 361 cctgctttctcatcagaatctactaacctccatgtacaatgatgggtttatggctaccca 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 561 cctgctttctcatcagaatctactaacttccatgtacaatgatgggtttatggctaccca 620
Query: 421 ttttctgaaaaccagacttagaatcagaaacagcaggaaggaggaagagggctggatatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttttctgaaaaccagacttagaatcagaaacagcaggaaggaggaagagggctggatatg 680
Query: 481 ggtaaacacacatctcttcagattctgaatccacctttgtatttcctgctgtttcctgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggtaaacacacatctcttcagattctgaatccacctttgtatttcctgctgtttcctgtc 740
Query: 541 ctctgtgggctcatgccatgttctctcctataattatgtgtgtggctaagagcagaggca 600
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 741 ctttgtgggctcatgccatgttctctcctataattatgtgtgtggctcagagcagaggca 800
Query: 601 gctaagtcagggaagagtgcctgtctttggggtcagcgtgggaatgaaactgaagtcagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gctaagtcagggaagagtgcctgtctttggggtcagcgtgggaatgaaactgaagtcagc 860
Query: 661 agtcccag 668
||||||||
Sbjct: 861 agtcccag 868
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no049_p16.g1 MSMg01no049_p16.g1 CHROMAT_FILE:
MSMg01no049_p16.g1 PHD_FILE: MSMg01no049_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:12:34 2005
(569 letters)
>mm_chr2_91200685_91201656
Length = 972
Score = 1029 bits (532), Expect = 0.0
Identities = 559/568 (98%), Gaps = 3/568 (0%)
Strand = Plus / Minus
Query: 1 ctggctgttgaagccaaggattcctgccctgttctccc-ccccgacccccctgctctgat 59
|||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 568 ctggctgttgaagccaaggattcctgccctgttcccccacccccacccccctgctctgat 509
Query: 60 tttaaagacatttctggaaactttcgtatgtggtgggaatgggaaggaagtaagttggcg 119
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 508 tttaaagacatttctggaaactttcgtatgtggtgggaatgggaaagaagtaagttggcg 449
Query: 120 ggtccaaagcgacttttctggacttatagcacctaaagggcttcagatcaccacttctca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ggtccaaagcgacttttctggacttatagcacctaaagggcttcagatcaccacttctca 389
Query: 180 aaaatctgatatggtgaattttcttgactaaagcacacaaagtaggctttgcaggcacca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aaaatctgatatggtgaattttcttgactaaagcacacaaagtaggctttgcaggcacca 329
Query: 240 ttggcacttctgaagctgtgtgcacgaagggaa-cccccc-ccaagtccagacttgcttt 297
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 328 ttggcacttctgaagctgtgtgcacgaagggaatcccccctccaagtccagacttgcttt 269
Query: 298 gtctctagcagtaggaactagtggacaatctgcagaggacacagttgctgggagcgttag 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gtctctagcagtaggaactagtggacaatctgcagaggacacagttgctgggagcgttag 209
Query: 358 tggtgacagactggggacagccagctcagtgggagagcacatacctcacctatgcatgac 417
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 208 tggtgacagactggggacagccagctcagtgggagagcacatacctcgcctatgcatgac 149
Query: 418 cccaggtttgatccccaacacctcaagaacaacccaaaacactactaggtgactgactaa 477
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 148 cccaggtttgatccccaacacctcaaaaacaacccaaaacactactaggtgactgactaa 89
Query: 478 tatcttttcaaataaatggataaacgaatgttcttaaccattttgtaactataatgagtt 537
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 88 tatcttttcaaataaatggataaacaaatgttcttaaccattttgtaactataatgagtt 29
Query: 538 tggtggttagagaactagtagtctaaag 565
||||||||||||||||||||||||||||
Sbjct: 28 tggtggttagagaactagtagtctaaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 972
Length adjustment: 10
Effective length of query: 559
Effective length of database: 962
Effective search space: 537758
Effective search space used: 537758
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
