Query= MSMg01no051_a20.b1 MSMg01no051_a20.b1 CHROMAT_FILE:
MSMg01no051_a20.b1 PHD_FILE: MSMg01no051_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:11 2005
(665 letters)
>mm_chr2_114023296_114024359
Length = 1064
Score = 1172 bits (606), Expect = 0.0
Identities = 642/654 (98%), Gaps = 3/654 (0%)
Strand = Plus / Plus
Query: 13 gaattctttataatcatagaaccaattttagacagatttaagtcttaaaaatatttaaaa 72
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 213 gaattctttataatcatagaactaattttagacagatttaagtcttaaaaatatttaaaa 272
Query: 73 ttctccaagtttttaaagtactttttcaacttgataagctatactgaaaaatgaccaaac 132
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 273 ttctacaagtttttaaagtacttttttaacttgataagctatactgaaaaatgaccaaac 332
Query: 133 cttattttttaacattcaataaccctttcagttccaactttcttcattattagatatgcc 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cttattttttaacattcaataaccctttcagttccaactttcttcattattagatatgcc 392
Query: 193 aataagttgctttgtcattataaaaaaaaaaaaacaccctgttattgtggtgcacctcta 252
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 393 aataagttgctttgtcattataaaaaaaaaaaa-caccctgttattgtggtgcacctcta 451
Query: 253 aagctacccatcatacattaaacacaggaaagaccgtgagtttgaggtcaatatgggcta 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aagctacccatcatacattaaacacaggaaagaccgtgagtttgaggtcaatatgggcta 511
Query: 313 ttcagcaatttcaggccaggctcagctagtgagactcctgccctaacagtaaatatttat 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 512 ttcagcaatttcaggccaggctcagctagtgagactcctgccctaacagtaaataaatat 571
Query: 373 ttgtaaattgattataaaaaaggtaaaaatataaaatattaagaacaagacattatcatt 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ttgtaaattgattataaaaaaggtaaaaatataaaatattaagaacaagacattatcatt 631
Query: 433 gaattatagcaatactgcagacatgctctgatcataaaccatttcatttaattatattta 492
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gaattatagcaatactacagacatgctctgatcataaaccatttcatttaattatattta 691
Query: 493 gatggttgacacaacattaaaactattctcaatgggctggatggcacatgcctttgaact 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gatggttgacacaacattaaaactattctcaatgggctggatggcacatgcctttgaact 751
Query: 553 cggcagatggcaggcacaagcaagtagatctctgtgagttcaagtctatactgctttcac 612
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 752 cggcagatggcaggcagaagcaagtagatctctgtgagttcaagtctatactgcttt-ac 810
Query: 613 c-aattccaagacagccacagctataaaatgagatccagtctccaaaaacaaac 665
|||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 agaattccaatacagccacagctataaaatgagatccagtctccaaaaacaaac 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1064
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1054
Effective search space: 690370
Effective search space used: 690370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no051_a20.g1 MSMg01no051_a20.g1 CHROMAT_FILE:
MSMg01no051_a20.g1 PHD_FILE: MSMg01no051_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:11 2005
(331 letters)
>mm_chr2_114031487_114032217
Length = 731
Score = 615 bits (318), Expect = e-180
Identities = 327/330 (99%)
Strand = Plus / Minus
Query: 2 tcagattttagcagcctatgtacatgaaagaggcaaggagataatttgttggttgctcca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tcagattttagcagcctatgtacatgaaagaggcaaggagataatttgttggttgctcca 472
Query: 62 cagcccagaggtaaaaatagaagaaggaagatgaaaaagcagaggtaacttctctaagag 121
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 caggaaagaggtaaaaatagaagaaggaagatgaaaaagcagaggtaacttctctaagag 412
Query: 122 gcctggaacttcaacaagcattaaaacttgaacttctactactgcatttggaatttttca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gcctggaacttcaacaagcattaaaacttgaacttctactactgcatttggaatttttca 352
Query: 182 ggccatacgtaaataatgacaaacacaaaattattagcatagaagagtttttcaattttt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ggccatacgtaaataatgacaaacacaaaattattagcatagaagagtttttcaattttt 292
Query: 242 ttaataaaacaaccctacaagcaatattttctcctccactttcccaagatcctctctcag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ttaataaaacaaccctacaagcaatattttctcctccactttcccaagatcctctctcag 232
Query: 302 gcagaccttctaggtagccgtgtagcggtt 331
||||||||||||||||||||||||||||||
Sbjct: 231 gcagaccttctaggtagccgtgtagcggtt 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
