Query= MSMg01no052_g18.b1 MSMg01no052_g18.b1 CHROMAT_FILE:
MSMg01no052_g18.b1 PHD_FILE: MSMg01no052_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:02 2005
(628 letters)
>mm_chr2_41660023_41661052
Length = 1030
Score = 1195 bits (618), Expect = 0.0
Identities = 627/630 (99%), Gaps = 2/630 (0%)
Strand = Plus / Minus
Query: 1 tctatttcttatgcg-atcctttcttgctttc-acaacccacgaagcagacacaactgat 58
||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 830 tctatttcttatgtgaatcctttcttgctttcaacaacccacgaagcagacacaactgat 771
Query: 59 tattttgctgctcttgggataaagttaggcctggcatggttttggttatattctcagtcc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 tattttgctgctcttgggataaagttaggcctggcatggttttggttatattctcagtcc 711
Query: 119 ttccaactaataaatatattccaaaactcagtattctcatttatagcaccatagagcagc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 ttccaactaataaatatattccaaaactcagtattctcatttatagcaccatagagcagc 651
Query: 179 attttctaatttagaataatgcatttcactctctaaatacttgagtgtttttcaaatgaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 attttctaatttagaataatgcatttcactctctaaatacttgagtgtttttcaaatgaa 591
Query: 239 tatatattcttaaataactccacatacaaagaatttgtgtaggcactatatattttaaaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tatatattcttaaataactccacatacaaagaatttgtgtaggcactatatattttaaaa 531
Query: 299 aataaaccatcatgtgtaagtaaatataccctacagaaatcttgctgatatctcctaaga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aataaaccatcatgtgtaagtaaatataccctacagaaatcttgctgatatctcctaaga 471
Query: 359 ttagatactgtctagatgttttcctcctaaaatatttatagggttaatactctcatgatt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttagatactgtctagatgttttcctcctaaaatatttatagggttaatactctcatgatt 411
Query: 419 acattatggataggaaagagagacacagaaaaataactgctttgtttcagttcacaaaga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 acattatggataggaaagagagacacagaaaaataactgctttgtttcagttcacaaaga 351
Query: 479 tgctggaaaggctatccacttcacacaatctatgtgttatcaagtagattttaattacta 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tgctggaaaggctatccacttcacacaatctatgtgttatcaagtagattttaattacta 291
Query: 539 ttatgcacagcttttacaattacttataagtgttcggttttttttaaattatactcctat 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttatgcacagcttttacaattacttataagtgttcggttttttttaaattatactcctat 231
Query: 599 tatgttttgtttataatatgactatcccgg 628
||||||||||||||||||||||||||||||
Sbjct: 230 tatgttttgtttataatatgactatcccgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1030
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1020
Effective search space: 630360
Effective search space used: 630360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_g18.g1 MSMg01no052_g18.g1 CHROMAT_FILE:
MSMg01no052_g18.g1 PHD_FILE: MSMg01no052_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:02 2005
(478 letters)
>mm_chr2_41522056_41522932
Length = 877
Score = 576 bits (298), Expect = e-169
Identities = 404/480 (84%), Gaps = 65/480 (13%)
Strand = Plus / Plus
Query: 1 tcagagctgctaattaggaagttgctagtgtctgtgcttatttgcaggaagatgaacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagagctgctaattaggaagttgctagtgtctgtgcttatttgcaggaagatgaacatc 260
Query: 61 agaatcagtggttacaatataagctcagcattaacactaacaatcatttttcacggtgct 120
|||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 261 agaatcagtggttagaatataagctcagcattaacactaacaatca-ttttcacagtgct 319
Query: 121 tacggagagttgtcttctcccaccagtctgaacttctgaactctaagcttatccagaatt 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tacggagagttgtcttctcccgccagtctgaacttctgaactctaagcttatccagaatt 379
Query: 181 agtatgcagaatcacacacacacacacacacacacacacacacacacacacacacacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 380 agtatgcagaatcacacacacacacacacacacacacacacacacacacactcacacac- 438
Query: 241 cacacacacacacacacacacacacaaacacacacaaacacacacacacacacctacttt 300
|||
Sbjct: 439 ---------------------------------------------------------ttt 441
Query: 301 cactttcttgggatgttatgcattcagtcagagatttaagaaaataatttgaatctctga 360
||||||||||||||||||||||||||||||| ||||| |||||| ||||| |||||| ||
Sbjct: 442 cactttcttgggatgttatgcattcagtcagcgatttcagaaaacaatttaaatctcaga 501
Query: 361 atgtcagagtgcaaagcagtcttgccgaaggtgggtaggtaatactgatgtatagttact 420
|||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 502 atgtcagagtccaaagcagtcttgccgaaggtgggta----atactgatgtatagttact 557
Query: 421 t--ctccatgaacccaattgccaaaaagaaggtgattagatttatccaacaaggtagcag 478
| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tttctccatgaacccacttgccaaaaagaaggtgattagatttatccaacaaggtagcag 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 91
Number of extensions: 32
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 877
Length adjustment: 10
Effective length of query: 468
Effective length of database: 867
Effective search space: 405756
Effective search space used: 405756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
