Query= MSMg01no054_e05.b1 MSMg01no054_e05.b1 CHROMAT_FILE:
MSMg01no054_e05.b1 PHD_FILE: MSMg01no054_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:24 2005
(286 letters)
>mm_chr2_120087231_120087916
Length = 686
Score = 487 bits (252), Expect = e-142
Identities = 274/286 (95%), Gaps = 8/286 (2%)
Strand = Plus / Minus
Query: 1 gattcagatagnaagtcttccctgggaattcctgctggcctcctcccccaaattttggac 60
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 655 gattcagatagcaagtcttccctgggaattcctgctggcctcctccaccaaattttggac 596
Query: 61 ttatcaagcttcctcaatggtgtgaaactacttatttcaattatttctcagtttctttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ttatcaagcttcctcaatggtgtgaaactacttatttcaattatttctcagtttctttca 536
Query: 121 gttactctacctctgtctctctctcttcctctttttctctctctctttgtctccacccac 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 535 gttactctacctctgtctctctctcttcctctttctctctctctctttgtctccacccac 476
Query: 181 ctcccacagtatatctatagcccactgaaactatgcagaaaaacaattgcatctgtacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ctcccacagtatatctatagcccactgaaactatgcagaaaaacaattgcatctgtacat 416
Query: 241 a----ttttattttttcttgncattattgctaaaatacacagcata 282
| ||||||||||| |||||||||||||||||||||||||
Sbjct: 415 aacag----attttttcttgtcattattgctaaaatacacagcata 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no054_e05.g1 MSMg01no054_e05.g1 CHROMAT_FILE:
MSMg01no054_e05.g1 PHD_FILE: MSMg01no054_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:25 2005
(203 letters)
>mm_chr2_119916042_119916644
Length = 603
Score = 393 bits (203), Expect = e-114
Identities = 203/203 (100%)
Strand = Plus / Plus
Query: 1 ctaactgagggaggcttggcagggtcaggcagcaggtgctgggacaagacaggttctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaactgagggaggcttggcagggtcaggcagcaggtgctgggacaagacaggttctcct 260
Query: 61 tgcctggctgcctactctgatggggactgcagatgggcccacacagacatggcacatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcctggctgcctactctgatggggactgcagatgggcccacacagacatggcacatcct 320
Query: 121 ctttcaaacctgggtattagtcttctctttggtttttaatctatggaaggcagaaactct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttcaaacctgggtattagtcttctctttggtttttaatctatggaaggcagaaactct 380
Query: 181 ctgttctgttccttttcctctct 203
|||||||||||||||||||||||
Sbjct: 381 ctgttctgttccttttcctctct 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 603
Length adjustment: 8
Effective length of query: 195
Effective length of database: 595
Effective search space: 116025
Effective search space used: 116025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
