Query= MSMg01no054_k18.b1 MSMg01no054_k18.b1 CHROMAT_FILE:
MSMg01no054_k18.b1 PHD_FILE: MSMg01no054_k18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:54 2005
(338 letters)
>mm_chr2_58352726_58353463
Length = 738
Score = 600 bits (310), Expect = e-176
Identities = 331/338 (97%)
Strand = Plus / Minus
Query: 1 cagagtgctttatcttcaaccttattctcttgttttcttattgagttcttctttaggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cagagtgctttatcttcaaccttattctcttgttttcttattgagttcttctttaggagg 479
Query: 61 gttaggctcagagatacagccagtagaggtctttggccagagggaagtcttaagacctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gttaggctcagagatacagccagtagaggtctttggccagagggaagtcttaagacctag 419
Query: 121 gaagatttgtttagatccatggaaagggagtattcaaatgtgctaaaaaccaaggcatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gaagatttgtttagatccatggaaagggagtattcaaatgtgctaaaaaccaaggcatta 359
Query: 181 caagttgggtttccttgcagagcccttgatggcgtttgacgatggtatgtctgacttact 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 358 caagttgggtttccttgcagagcccttgatggcatttgacgatggtatgtctgacttact 299
Query: 241 gtcttcctgtgttagcttttgtgtctgacttacatttctttttttccttccacagctata 300
||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 298 gtcaccctgtgttagtttttgtgtccgacttacatttctttttttccttccacagttata 239
Query: 301 caatggtcgatggggtaatgatccttcctgtgctaatg 338
||||||||||||| ||||||||||||||||||||||||
Sbjct: 238 caatggtcgatggagtaatgatccttcctgtgctaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_k18.g1 MSMg01no054_k18.g1 CHROMAT_FILE:
MSMg01no054_k18.g1 PHD_FILE: MSMg01no054_k18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:55 2005
(568 letters)
>mm_chr2_58203294_58204262
Length = 969
Score = 1000 bits (517), Expect = 0.0
Identities = 557/573 (97%), Gaps = 5/573 (0%)
Strand = Plus / Plus
Query: 1 ctaaaggcaagtagatgtttgtattgttcacgttctagggaccaggaagccctcacgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaaaggcaagtagatgtttgtattgttcacgttctagggaccaggaagccctcacgttt 260
Query: 61 tgagatccaactctcaaaaacccaagaaatatacagaagtcagagtcatagttgtgtctt 120
|||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 261 tgagatccaactctcaaaaaaccaagaaatatatagaagtcagagtcatagttttgtctt 320
Query: 121 ctccttcagaaacaaatccagaaaaagttactgcggcctcagcacagagaaggaactctg 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 ctccttcagaaacaaatccagaaaaagttactgtggcctcagcacagagaaggaactctg 380
Query: 181 cattccttcccagagacccagtgcctgtgccttacttcacatcattgtcacctgtgttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cattccttcccagagacccagtgcctgtgccttacttcacatcattgtcacctgtgttcc 440
Query: 241 tcacagcttgcctgagagctgtactaatgtggaaagggaccctgggggcctagatctgcc 300
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 tcacagtttgcctgagagctgtactaatgtggaaaggaaccctgggggcctagatctgcc 500
Query: 301 tcttccatagtgcctacttgtcaaacaattggtggcccccaaacgatatagtgtccagat 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 tcttccatagtgcctacttgtcaaacaattggtggccttgaaacgatatagtgtccagat 560
Query: 361 ctagaattctgggttatccgtgccctacatggctccctcattgattcattgactgttgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctagaattctgggttatccgtgccctacatggctccctcattgattcattgactgttgaa 620
Query: 421 ttagtagggatttaggaaggtagagtatattggagttatgccatgcagttatgggctaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttagtagggatttaggaaggtagagtatattggagttatgccatgcagttatgggctaca 680
Query: 481 tagcagattacaaaaagttattttcctttgttctgacaaaaccatcccccttttctaggt 540
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 681 tagcaggttacaaaaagttattttcctttgttctgacacaaccatcccccttttctaggt 740
Query: 541 cttccttttatttt-----tttttcaatttttt 568
|||||||||||||| ||||||||||||||
Sbjct: 741 cttccttttattttatttttttttcaatttttt 773
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 969
Length adjustment: 10
Effective length of query: 558
Effective length of database: 959
Effective search space: 535122
Effective search space used: 535122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
