Query= MSMg01no056_n23.b1 MSMg01no056_n23.b1 CHROMAT_FILE:
MSMg01no056_n23.b1 PHD_FILE: MSMg01no056_n23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:38 2005
(551 letters)
>mm_chr2_84440740_84441689
Length = 950
Score = 1013 bits (524), Expect = 0.0
Identities = 542/548 (98%), Gaps = 1/548 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttatccctcttctcctgttccttaatatattgaggctatggggtaggagaaa 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ggaattctttatccctcttgtcctgttccttaatatattgaggctatggggtaggagaaa 691
Query: 64 agtgcacagcccaccaactccttttcttatacattacagtcaccccctccccccaacctt 123
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 690 agtgcacagcccaccaactccttttcttatacattgcagtcaccccctccccccaacctt 631
Query: 124 tgcttccttcccatttcttcctagtcccatttcccttttctggcaaaaaggagctctgtg 183
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 630 tgcttccttcccatttcttcctagtcccgtttcccttttctggcaaaaaggagctctgtg 571
Query: 184 ctctctgtgaccctcagagtacactgcacaggggagcctcccccacccacatctatctgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ctctctgtgaccctcagagtacactgcacaggggagcctcccccacccacatctatctgc 511
Query: 244 ctctggttttgggttctcttgtcctcctctgctcttcctggtgctctttcttctcggtgg 303
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 510 ctctggttttgggttctcttgtcctcttctgctcttcctggtgctctttcttctcggtgg 451
Query: 304 ggtgtgggtaatagaatagccatgggctttggggacctttaactgtttttttgtttgttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ggtgtgggtaatagaatagccatgggctttggggacctttaactgtttttttgtttgttt 391
Query: 364 tgttttgtttttcctttttcatttataaaaacactaaacattcaatttcagcaaaccaaa 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 -gttttgtttttcctttttcatttataaaaacactaaacattcaatttcagcaaaccaaa 332
Query: 424 aatcctaccctcccaccgaatactactaaggggcatatcttctgctctgtatcttttctc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aatcctaccctcccaccgaatactactaaggggcatatcttctgctctgtatcttttctc 272
Query: 484 tctttctttctcttgataatgcttttaaaaacaaatgagttttttatataaataaaagtt 543
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tctttctttctcttgttaatgcttttaaaaacaaatgagttttttatataaataaaagtt 212
Query: 544 tttaaagt 551
||||||||
Sbjct: 211 tttaaagt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 950
Length adjustment: 10
Effective length of query: 541
Effective length of database: 940
Effective search space: 508540
Effective search space used: 508540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no056_n23.g1 MSMg01no056_n23.g1 CHROMAT_FILE:
MSMg01no056_n23.g1 PHD_FILE: MSMg01no056_n23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:38 2005
(290 letters)
>mm_chr2_84323392_84324081
Length = 690
Score = 561 bits (290), Expect = e-164
Identities = 290/290 (100%)
Strand = Plus / Plus
Query: 1 agcggcaaggttgcctcggggcaggagtgaaaacagaacaaaccctagctccaagttggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcggcaaggttgcctcggggcaggagtgaaaacagaacaaaccctagctccaagttggg 260
Query: 61 aagatgggagagatgattggggagttacataaataagatcggtttaaataacaaaccctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagatgggagagatgattggggagttacataaataagatcggtttaaataacaaaccctg 320
Query: 121 tgttatgaccaaaataaggatataatttcgtggtagtgtgtttattctctctgagcctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttatgaccaaaataaggatataatttcgtggtagtgtgtttattctctctgagcctca 380
Query: 181 tacagggtaacctgaagggtggatgagtcaaagaccatgaatctagatcctgttcacttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacagggtaacctgaagggtggatgagtcaaagaccatgaatctagatcctgttcacttt 440
Query: 241 cctgcttcctcggtacagggaaggctgactctcataataaagtgtgagag 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgcttcctcggtacagggaaggctgactctcataataaagtgtgagag 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
