Query= MSMg01no058_a17.b1 MSMg01no058_a17.b1 CHROMAT_FILE:
MSMg01no058_a17.b1 PHD_FILE: MSMg01no058_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:12 2005
(624 letters)
>mm_chr2_87745469_87746492
Length = 1024
Score = 1199 bits (620), Expect = 0.0
Identities = 623/624 (99%)
Strand = Plus / Minus
Query: 1 gttcaggcaacctcacaaatcacatctgtcttgaatagtttatgaaacatttctaatgag 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 824 gttcaggcaacctcacaaatcacatctgtcttgcatagtttatgaaacatttctaatgag 765
Query: 61 taatgtttaaagatttagatgaaaactttcaaagatatggaactacagttagtcaatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 taatgtttaaagatttagatgaaaactttcaaagatatggaactacagttagtcaatttg 705
Query: 121 atttcacattatttttagacacatataattgaacttgaacacctatatagctctgtgaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 atttcacattatttttagacacatataattgaacttgaacacctatatagctctgtgaca 645
Query: 181 tgttccttcaactaaggtcacatttattagatgtgattaaattgaaaaattggtaaacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tgttccttcaactaaggtcacatttattagatgtgattaaattgaaaaattggtaaacta 585
Query: 241 acgtaccatgctatacacaccaggagccatagtattttactttctctatcactactcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 acgtaccatgctatacacaccaggagccatagtattttactttctctatcactactcttt 525
Query: 301 cttatgacctgatgctgtatttccatctgtcactgttctatacttgataaatttctccct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cttatgacctgatgctgtatttccatctgtcactgttctatacttgataaatttctccct 465
Query: 361 ttccaaataaaattattgtcctgttctttattttctaaccagaaaaggaactagcacaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ttccaaataaaattattgtcctgttctttattttctaaccagaaaaggaactagcacaaa 405
Query: 421 atattcacaaaatatacgggtgtttactgaaagaagactttagaaaatagtgttgcctta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 atattcacaaaatatacgggtgtttactgaaagaagactttagaaaatagtgttgcctta 345
Query: 481 ggtaattagaatttcagttcagtatagatataaatatattaattcatggtatgttttcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ggtaattagaatttcagttcagtatagatataaatatattaattcatggtatgttttcct 285
Query: 541 acaacagtattattttcaaagtctaattataaagaatggaactagactcattttatttat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 acaacagtattattttcaaagtctaattataaagaatggaactagactcattttatttat 225
Query: 601 tgcaattatatttattgatgattt 624
||||||||||||||||||||||||
Sbjct: 224 tgcaattatatttattgatgattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no058_a17.g1 MSMg01no058_a17.g1 CHROMAT_FILE:
MSMg01no058_a17.g1 PHD_FILE: MSMg01no058_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:12 2005
(636 letters)
>mm_chr2_87680823_87681858
Length = 1036
Score = 327 bits (169), Expect = 2e-93
Identities = 277/313 (88%), Gaps = 4/313 (1%)
Strand = Plus / Plus
Query: 325 ataaaaattatttctctgaatttaaatgtaaactcaaatgtatgagtaatttcaaggctt 384
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 525 ataaaaattatttctctaaatttaaatgtgaactcaaatgtatgagtaatttcaagactt 584
Query: 385 acttaagtccaaagagttaaggt-gtgtcatcatagacaggctttcttaattttaaccct 443
||||||||||||||||||| ||| |||||||| |||| | |||||||||||||||||||
Sbjct: 585 acttaagtccaaagagtta-ggttgtgtcatcgtagatatactttcttaattttaaccct 643
Query: 444 tactaggaacactaaagttattcagctttgaactgattt-tcatgaggagattgaacctc 502
|||||||||||||||||||||||||||||||||||| || | |||| || | || |||||
Sbjct: 644 tactaggaacactaaagttattcagctttgaactgacttgt-atgatgaaagtgcacctc 702
Query: 503 actcagcatacccctacattttcatctatctcctaccagattttcaaagaacaacttgtt 562
| |||||| |||||| ||||||||||||||||||||||||||| |||| ||||| |||||
Sbjct: 703 aatcagcaaacccctgcattttcatctatctcctaccagatttccaaataacaagttgtt 762
Query: 563 ttagaggaggttttgcctttttctatgctggtaataacattgctaagttgtgtctgttca 622
|||||| ||| |||| | ||||||| |||||||| ||||||||| ||||| || || |
Sbjct: 763 ttagagaaggatttgtcattttctacactggtaatgccattgctaaattgtgccttttta 822
Query: 623 gtgtataaccccc 635
|| ||| ||||||
Sbjct: 823 gtttatgaccccc 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
