Query= MSMg01no058_k19.b1 MSMg01no058_k19.b1 CHROMAT_FILE:
MSMg01no058_k19.b1 PHD_FILE: MSMg01no058_k19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:59 2005
(440 letters)
>mm_chr2_121183375_121184214
Length = 840
Score = 835 bits (432), Expect = 0.0
Identities = 438/440 (99%)
Strand = Plus / Minus
Query: 1 attttccccaggagagtcagccgcaggaaaaccacagaataaacagatagaggaggaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 attttccccaggagagtcagccgcaggaaaaccacagaataaacagatagaggaggaaga 581
Query: 61 ctgagcgagctcaggggaaagacagcacagcctcaaggtcaccttcccctaagaaccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ctgagcgagctcaggggaaagacagcacagcctcaaggtcaccttcccctaagaaccagg 521
Query: 121 aagagcaccagggaactcccagctacacctatgctttcctaataaggttgagaaaggatc 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 520 aagagcaccagggaactcccagctacacctatgctttcctaataagattgagaaaggatc 461
Query: 181 ccttaagaatcagaaagctattggctcttatcctgtctattctgtctcccaaactcactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ccttaagaatcagaaagctattggctcttatcctgtctattctgtctcccaaactcactg 401
Query: 241 cctccaagtcttctgcttggctatttcctgcctctcattggggacctgctttttttttct 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cctccaagtcttcagcttggctatttcctgcctctcattggggacctgctttttttttct 341
Query: 301 ttttttcctctactctaacccctgcttcacctttgatcttttatttctcttcttcttttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttttttcctctactctaacccctgcttcacctttgatcttttatttctcttcttcttttc 281
Query: 361 caggcttaaatctgtttgctgttcgaaggactcttcctgagtagtgtctgaaagcctacc 420
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Sbjct: 280 caggcttaaatctgtttgctgttcgaaggactcttcctgagtagtgtctgaaagcctacc 221
Query: 421 tgttgattgctctgggtgtg 440
||||||||||||||||||||
Sbjct: 220 tgttgattgctctgggtgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no058_k19.g1 MSMg01no058_k19.g1 CHROMAT_FILE:
MSMg01no058_k19.g1 PHD_FILE: MSMg01no058_k19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:59 2005
(116 letters)
>mm_chr2_121042142_121042658
Length = 517
Score = 203 bits (105), Expect = 3e-57
Identities = 114/117 (97%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 1 atatctcaatatgtataatgagagcctgtctctaac-aaagccacacatattctctctct 59
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 201 atatctcaatatgtataatgagagcctgtctcaaaagaaagccacacatattctctctct 260
Query: 60 taaatgtgatggcttacattgacttgggaatccaccattaagaaagtcttcactggc 116
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaatgtgatggcttacattgacttgggaatccaccattaagaaagtcttcactggc 317
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 116
Length of database: 517
Length adjustment: 8
Effective length of query: 108
Effective length of database: 509
Effective search space: 54972
Effective search space used: 54972
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
