CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATTCATATCTCTTTTTTCTTTGTGTCATTCTCTGACTCTTTCAAA
ATTATTCTGGCTACACTTTGAGACCCCATTAGATGAAGGCTCCGTAGAAA
AAGTGAACTATAATTTATCATAGGAGGCAGCAAACTTTGTCCTGGGTTGG
GCACAGTCCTAGATGGGAAGAAAGGGTCTGGTACCTTCTCAATGCTGCCC
ACCATTGCTTGCATAGATTCTTTCTTGCCTCAGGCTTTTACACATGCACT
TAGATTTCAATAGGGCAAGACCATGAGGGTAGGAGACAGGGAGGGAAGTG
CAAGCCATAGCACGTGTGCTTGAAATTGAGAGACCTGTCTCCTTAAGAGA
CACACACTTCATTCTCTGCGTGTTAAATTCCTGGGTCTCTTCAACAAATA
GACAGAGTTATAGGAGGGTACACTACAAATATACTTTCTTGCAGTTCTGG
ATGTCAGGGGTCTGAATTGGTGCTGCCAGACTGATCATGACTTTTTCTGA
AAGCTCTAGGGAGAAGGTAGTTTTCGCCCTTTCCAGCAGCTGGTTGTTGT
GGCTACATCTCTCCAGTCTGTGCCTCTGGGTAGCAATGGCTGCTTCTGCT
GGTCCTCTTCTTTTCTAAGGGTACTGGCCAGAAGACAGAGGTTCACCATT
ACAGCAGGGG

ATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATTTTTTAGAGGGCAAATACTTGTTT
ATTTCCATATGTGTCTTGAAATTCTGAAACTTTATATGATGAAATATTTT
AATAAAGGATGGTCACTGAAATCTTGACCTGTATACAGAATACTTCATTG
AAAGGGAAGGTTTAGTTCAGAAATTCTGGAAATTGAAAAAAAAGTTCCCT
TTCTTGGCGTGGGGTGTAAATAAGTTCAGTTATGTTTAACCTATTTTTAC
ATGCTTCATAGAAAAGATAAATGAACATTGACTAGAAATAAAATAAAAAT
AACATTCTGAGTCTCAGAAATACTATCAAGCACTCATGGCCATTTTATTT
CCTCTTTTTTTGTAAAAGCAAAAAAACCTGAAAGAGGGGGGATGGGAAAG
AACATTGGCAGCCTATGGTACTGCCTAGCAATGCCAATACTCATCATAAT
TGGCCCACAGGTAATATCATTTTGGCTGTAAGCTCATGTCATTACTTTCA
CTACACATATTGTTTTTCATTTAAAAATAGCTATTGTCTTCCAGGCATAT
TTGAACTTTTCATTCCTATATTTTCCCTTCTTTACATAGGGCAGGTCAAT
TCAGTGTTGTTGTTCTCCTTTCTTAATGCTCTTTGGCATTTGTCAGTTGC
TAAAGGTTCGAAT

Query= MSMg01no058_m04.b1 MSMg01no058_m04.b1 CHROMAT_FILE:
MSMg01no058_m04.b1 PHD_FILE: MSMg01no058_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:05 2005
         (633 letters)



>mm_chr2_51089253_51090285
          Length = 1033

 Score = 1199 bits (620), Expect = 0.0
 Identities = 623/624 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattcatatctcttttttctttgtgtcattctctgactctttcaaaattattctg 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gaattcattcatatttcttttttctttgtgtcattctctgactctttcaaaattattctg 565

                                                                       
Query: 65  gctacactttgagaccccattagatgaaggctccgtagaaaaagtgaactataatttatc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gctacactttgagaccccattagatgaaggctccgtagaaaaagtgaactataatttatc 505

                                                                       
Query: 125 ataggaggcagcaaactttgtcctgggttgggcacagtcctagatgggaagaaagggtct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ataggaggcagcaaactttgtcctgggttgggcacagtcctagatgggaagaaagggtct 445

                                                                       
Query: 185 ggtaccttctcaatgctgcccaccattgcttgcatagattctttcttgcctcaggctttt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggtaccttctcaatgctgcccaccattgcttgcatagattctttcttgcctcaggctttt 385

                                                                       
Query: 245 acacatgcacttagatttcaatagggcaagaccatgagggtaggagacagggagggaagt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acacatgcacttagatttcaatagggcaagaccatgagggtaggagacagggagggaagt 325

                                                                       
Query: 305 gcaagccatagcacgtgtgcttgaaattgagagacctgtctccttaagagacacacactt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcaagccatagcacgtgtgcttgaaattgagagacctgtctccttaagagacacacactt 265

                                                                       
Query: 365 cattctctgcgtgttaaattcctgggtctcttcaacaaatagacagagttataggagggt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cattctctgcgtgttaaattcctgggtctcttcaacaaatagacagagttataggagggt 205

                                                                       
Query: 425 acactacaaatatactttcttgcagttctggatgtcaggggtctgaattggtgctgccag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 acactacaaatatactttcttgcagttctggatgtcaggggtctgaattggtgctgccag 145

                                                                       
Query: 485 actgatcatgactttttctgaaagctctagggagaaggtagttttcgccctttccagcag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 actgatcatgactttttctgaaagctctagggagaaggtagttttcgccctttccagcag 85

                                                                       
Query: 545 ctggttgttgtggctacatctctccagtctgtgcctctgggtagcaatggctgcttctgc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84  ctggttgttgtggctacatctctccagtctgtgcctctgggtagcaatggctgcttctgc 25

                                   
Query: 605 tggtcctcttcttttctaagggta 628
           ||||||||||||||||||||||||
Sbjct: 24  tggtcctcttcttttctaagggta 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space:   637329
Effective search space used:   637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no058_m04.g1 MSMg01no058_m04.g1 CHROMAT_FILE:
MSMg01no058_m04.g1 PHD_FILE: MSMg01no058_m04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:05 2005
         (579 letters)



>mm_chr2_51053065_51054043
          Length = 979

 Score = 1120 bits (579), Expect = 0.0
 Identities = 579/579 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   attttttagagggcaaatacttgtttatttccatatgtgtcttgaaattctgaaacttta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttttagagggcaaatacttgtttatttccatatgtgtcttgaaattctgaaacttta 260

                                                                       
Query: 61  tatgatgaaatattttaataaaggatggtcactgaaatcttgacctgtatacagaatact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatgatgaaatattttaataaaggatggtcactgaaatcttgacctgtatacagaatact 320

                                                                       
Query: 121 tcattgaaagggaaggtttagttcagaaattctggaaattgaaaaaaaagttccctttct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcattgaaagggaaggtttagttcagaaattctggaaattgaaaaaaaagttccctttct 380

                                                                       
Query: 181 tggcgtggggtgtaaataagttcagttatgtttaacctatttttacatgcttcatagaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggcgtggggtgtaaataagttcagttatgtttaacctatttttacatgcttcatagaaa 440

                                                                       
Query: 241 agataaatgaacattgactagaaataaaataaaaataacattctgagtctcagaaatact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agataaatgaacattgactagaaataaaataaaaataacattctgagtctcagaaatact 500

                                                                       
Query: 301 atcaagcactcatggccattttatttcctctttttttgtaaaagcaaaaaaacctgaaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcaagcactcatggccattttatttcctctttttttgtaaaagcaaaaaaacctgaaag 560

                                                                       
Query: 361 aggggggatgggaaagaacattggcagcctatggtactgcctagcaatgccaatactcat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggggggatgggaaagaacattggcagcctatggtactgcctagcaatgccaatactcat 620

                                                                       
Query: 421 cataattggcccacaggtaatatcattttggctgtaagctcatgtcattactttcactac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cataattggcccacaggtaatatcattttggctgtaagctcatgtcattactttcactac 680

                                                                       
Query: 481 acatattgtttttcatttaaaaatagctattgtcttccaggcatatttgaacttttcatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acatattgtttttcatttaaaaatagctattgtcttccaggcatatttgaacttttcatt 740

                                                  
Query: 541 cctatattttcccttctttacatagggcaggtcaattca 579
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cctatattttcccttctttacatagggcaggtcaattca 779


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space:   551361
Effective search space used:   551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)