TTATTTGCGGCGCTATACGACTCCTATATTCCGAGNTGCGCGGATTCATC
TGGGTTTTCTGTTTTTTGTTTTTTTTTTGGTTTTTTGAGACAGGGTTTCT
CTATGTAGCCCTGGCTGCCCTGGAACTCACTTTGTAGACCAGGCTGTCCT
CGAACTCAGAAATCTGCCTGCCTCTACCTCCTGAGTGCTGGGATTAAAGG
CGTGTGCCACCATGTCCAACTCATCTGGCTTTTTGTGTCAAGGTTATCAT
CTGAGCCCTCGGTCGCTTACTCATATGTCCACATTATGAGGATCCGACAA
CTCCAAACTCTAGATTTTTTTGTTAGCAACCCCACGTCCTGCAAACATGT
AAAGTTCTCATAACCCCCCCTCCCTTGGTGTGCGTCTTTACATTTTGTCG
TTACTTTGTTCCCCCCCATATTGATACATAAATAACACCCCATATAAACC
TGTAATTCTTTTATTACTCTCTTCCTGATAACTAACATACTAAGCATTAT
GTCACTCCCACCATACTTTAAAATTATATGCCACCTCGTTATATTCTTGA
CATTCTAGTTCCAAACTAATAATTATATTAACTTATCTAATTTTTTTAAC
CTACCATCCTTTCTCTTTTTTTTTACCCCGCTTCTTCCTATGCAACATAC
TAGCCTCCCTTCTGTTTTAATAACTAAATATATTGTCCTCATCTTACATA
TCCATCACCCTTTACCTN

TGATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAGATGCTGGTCTCTGCCTTCCAGGTGCTGAG
ATTAAAGGCGTGCACCACCACCACCACCACCCGGTTTAGGATTGCTGTTT
TGGTTGCATCTGAATAAAAATCAGTTTCTATATGGTGGCCCTGTGATGTG
TGGTGCGAGCATCCTTTTTCTTTATGTTTTATTTTTATTTTTTTAAGATT
TATTTATTTTGTGTGAGCACACTGTAGTTCTCTTCAGACACACCAGAAGA
GGACACCAGATCCCATTACAAATGGCTGTGAGCCACCATGTGGTTGCTGG
GAATTGAACGCAGGACCTCTAGAAGAGCAGTTAGTGCTCTGAGCCATCTC
TCCAGCCCAGGTTTTATCTTTAAATTGGCTCTGCCAGATTTTTCCAGATG
TTTTAATGAGCTCTAGTTTTATATGCTAGTGTCTCTGCTCTGTATAATTT
ATGAGTCCAACACCCCCGTCCCTAACCTTGGCACTCTACTTCCTTGCTCC
CTCTCACCCTTTGTAACCAGGCTGGTCTGGAACACCCCAGCCTCCATCCT
CAGCCTCTAAAGTTCTGGGCTATCTTTTTATTGAGTGATTTTGGGGATAC
TGGAGGGTGGAACTCTCCAGTGAGCTACATCCTGCAGTGGATGTTCTCCA
ATCAAAATGT

Query= MSMg01no059_b19.g1 MSMg01no059_b19.g1 CHROMAT_FILE:
MSMg01no059_b19.g1 PHD_FILE: MSMg01no059_b19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:32 2005
         (641 letters)



>mm_chr2_168053553_168054593
          Length = 1041

 Score = 1222 bits (632), Expect = 0.0
 Identities = 638/640 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    agatgctggtctctgccttccaggtgctgagattaaaggcgtgcaccaccaccaccacca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 agatgctggtctctgccttccaggtgctgagattaaaggcgtgcaccaccaccaccacca 968

                                                                        
Query: 61   cccggtttaggattgctgttttggttgcatctgaataaaaatcagtttctatatggtggc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967  cccggtttaggattgctgttttggttgcatctgaataaaaatcagtttctatatggtggc 908

                                                                        
Query: 121  cctgtgatgtgtggtgcgagcatcctttttctttatgttttatttttatttttttaagat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907  cctgtgatgtgtggtgcgagcatcctttttctttatgttttatttttatttttttaagat 848

                                                                        
Query: 181  ttatttattttgtgtgagcacactgtagttctcttcagacacaccagaagaggacaccag 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847  ttatttattttgtgtgagcacactgtagttctcttcagacacaccagaagaggacaccag 788

                                                                        
Query: 241  atcccattacaaatggctgtgagccaccatgtggttgctgggaattgaacgcaggacctc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787  atcccattacaaatggctgtgagccaccatgtggttgctgggaattgaacgcaggacctc 728

                                                                        
Query: 301  tagaagagcagttagtgctctgagccatctctccagcccaggttttatctttaaattggc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727  tagaagagcagttagtgctctgagccatctctccagcccaggttttatctttaaattggc 668

                                                                        
Query: 361  tctgccagatttttccagatgttttaatgagctctagttttatatgctagtgtctctgct 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667  tctgccagatttttccagatgttttaatgagctctagttttatatgctagtgtctctgct 608

                                                                        
Query: 421  ctgtataatttatgagtccaacacccccgtccctaaccttggcactctacttccttgctc 480
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607  ctgtttaatttatgagtccaacacccccgtccctaaccttggcactctacttccttgctc 548

                                                                        
Query: 481  cctctcaccctttgtaaccaggctggtctggaacaccccagcctccatcctcagcctcta 540
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547  cctctcacgctttgtaaccaggctggtctggaacaccccagcctccatcctcagcctcta 488

                                                                        
Query: 541  aagttctgggctatctttttattgagtgattttggggatactggagggtggaactctcca 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487  aagttctgggctatctttttattgagtgattttggggatactggagggtggaactctcca 428

                                                    
Query: 601  gtgagctacatcctgcagtggatgttctccaatcaaaatg 640
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 427  gtgagctacatcctgcagtggatgttctccaatcaaaatg 388


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)