Query= MSMg01no061_k07.b1 MSMg01no061_k07.b1 CHROMAT_FILE:
MSMg01no061_k07.b1 PHD_FILE: MSMg01no061_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:41 2005
(658 letters)
>mm_chr2_44743687_44744744
Length = 1058
Score = 1234 bits (638), Expect = 0.0
Identities = 649/654 (99%), Gaps = 4/654 (0%)
Strand = Plus / Minus
Query: 7 gaattcccattttcc--tccggaagggttaaaaattctaagaagcttttcttgaaataaa 64
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gaattcccattttccagt--ggaagggttaaaaattctaagaagcttttcttgaaataaa 801
Query: 65 gcttgtccttcagttattaagtgtgcttgcctcttatctgtggatttcatccctggtttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gcttgtccttcagttattaagtgtgcttgcctcttatctgtggatttcatccctggtttt 741
Query: 125 agtattaactgctttttgttaggatcatagaattaggatttaagtccttgcaatctgact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 agtattaactgctttttgttaggatcatagaattaggatttaagtccttgcaatctgact 681
Query: 185 gtggtctacctttgtactggaaccatgctcttcaaggttactactggtgaccactctcta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtggtctacctttgtactggaaccatgctcttcaaggttactactggtgaccactctcta 621
Query: 245 ggcacatgtagagtttttctgtcttgttcctctcagtctccatttccctgacatactaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggcacatgtagagtttttctgtcttgttcctctcagtctccatttccctgacatactaac 561
Query: 305 accgcatgactttggatttttcatttatactggcattttccttcaggtttttactttgaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 accgcatgactttggatttttcatttatactggcattttccttcaggtttttactttgaa 501
Query: 365 ctctactacccactctatttcctgtaatgcctgtctcttaggtatttggaaaggttttgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctctactacccactctatttcctgtaatgcctgtctcttaggtatttggaaaggttttgt 441
Query: 425 ctttttctttgttaggcatcttgtgaattttaaatctgagaactttagttcttactttgc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctttttctttgttaggcatcttgtgaattttaaatctgagaactttagttcttactttgc 381
Query: 485 ttttgaatcatagacaaatcatcagttattttgtgatgctcctactgatggattgatgtg 544
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 380 ttttgaatcatagacaaatcatcagttattttgtgatgcttctactgatggattgatgtg 321
Query: 545 gctatccattttcagagcttcagtttatatccagactccgctttgtaattccatctgttt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gctatccattttcagagcttcagtttatatccagactccgctttgtaattccatctgttt 261
Query: 605 tagagcaatgtctttccatgccccaaaatcttcagatgctcttatcttttgaac 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tagagcaatgtctttccatgccccaaaatcttcagatgctcttatcttttgaac 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_k07.g1 MSMg01no061_k07.g1 CHROMAT_FILE:
MSMg01no061_k07.g1 PHD_FILE: MSMg01no061_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:41 2005
(644 letters)
>mm_chr2_44625059_44626102
Length = 1044
Score = 1201 bits (621), Expect = 0.0
Identities = 636/641 (99%)
Strand = Plus / Plus
Query: 1 ttataaaatgtcccaaagtcagtaatccttatgcctaattaatcttctctctaaggtata 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttataaagtgtcccaaagtcagtaatccttatgcctaattaatcttctctctaaggtata 260
Query: 61 ggtaatttaacaggcatttataaattttcttattaaaaagatccccttattattaaacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtaatttaacaggcatttataaattttcttattaaaaagatccccttattattaaacat 320
Query: 121 ataatatataataatattttaagtagcagtagggaaaaacaaaattactgaggcatgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataatatataataatattttaagtagcagtagggaaaaacaaaattactgaggcatgtga 380
Query: 181 aatgaaaagtatttgaaaataatgtagtctgcgttcttttaaagagcaacaatatggtga 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgaaaagtatttgaaaatgatgtagtctgcgttcttttaaagagcaacaatatggtga 440
Query: 241 tgtcctctctcagttcagttactattgctgtgatgaaacacaacatcaacttgtggagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtcctctctcagttcagttactattgctgtgatgaaacacaacatcaacttgtggagga 500
Query: 301 aagagcttttgcttatatttccaaacaattctcttcaatgggcaacaattcaaacaagat 360
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 501 aagagcttttgcttatatttccaaacaattctcttcaatgggtaagaattcaaacaagat 560
Query: 361 aagaacttggaggtaggagctgattcacaggctatggtgggatgctgcttactggcttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagaacttggaggtaggagctgattcacaggctatggtgggatgctgcttactggcttgg 620
Query: 421 tcctcatggcttgctcagcctggttttttatagcactcagaagtgccagtctagggaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcctcatggcttgctcagcctggttttttatagcactcagaagtgccagtctagggaaga 680
Query: 481 catcgccaagcagtaggctgggccctttcacctatatcattaattaagaaaatgccctac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catcgccaagcagtaggctgggccctttcacctatatcattaattaagaaaatgccctac 740
Query: 541 aggcttgcctacagccatttctcaatttaggtttcctctctcagatgactttagctccag 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 741 aggcttgcctacagccatttctcaatttaggtttcctctctcagatgactttagcttcag 800
Query: 601 tcaagctgacataaaactagccagaacatctccatatagta 641
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcaagctgacataaaactagccagaacatctccatatagta 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
