Query= MSMg01no061_o20.b1 MSMg01no061_o20.b1 CHROMAT_FILE:
MSMg01no061_o20.b1 PHD_FILE: MSMg01no061_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:02 2005
(665 letters)
>mm_chr2_87745430_87746494
Length = 1065
Score = 1276 bits (660), Expect = 0.0
Identities = 663/664 (99%)
Strand = Plus / Minus
Query: 1 agttcaggcaacctcacaaatcacatctgtcttgaatagtttatgaaacatttctaatga 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 864 agttcaggcaacctcacaaatcacatctgtcttgcatagtttatgaaacatttctaatga 805
Query: 61 gtaatgtttaaagatttagatgaaaactttcaaagatatggaactacagttagtcaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gtaatgtttaaagatttagatgaaaactttcaaagatatggaactacagttagtcaattt 745
Query: 121 gatttcacattatttttagacacatataattgaacttgaacacctatatagctctgtgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gatttcacattatttttagacacatataattgaacttgaacacctatatagctctgtgac 685
Query: 181 atgttccttcaactaaggtcacatttattagatgtgattaaattgaaaaattggtaaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atgttccttcaactaaggtcacatttattagatgtgattaaattgaaaaattggtaaact 625
Query: 241 aacgtaccatgctatacacaccaggagccatagtattttactttctctatcactactctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aacgtaccatgctatacacaccaggagccatagtattttactttctctatcactactctt 565
Query: 301 tcttatgacctgatgctgtatttccatctgtcactgttctatacttgataaatttctccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tcttatgacctgatgctgtatttccatctgtcactgttctatacttgataaatttctccc 505
Query: 361 tttccaaataaaattattgtcctgttctttattttctaaccagaaaaggaactagcacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttccaaataaaattattgtcctgttctttattttctaaccagaaaaggaactagcacaa 445
Query: 421 aatattcacaaaatatacgggtgtttactgaaagaagactttagaaaatagtgttgcctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatattcacaaaatatacgggtgtttactgaaagaagactttagaaaatagtgttgcctt 385
Query: 481 aggtaattagaatttcagttcagtatagatataaatatattaattcatggtatgttttcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aggtaattagaatttcagttcagtatagatataaatatattaattcatggtatgttttcc 325
Query: 541 tacaacagtattattttcaaagtctaattataaagaatggaactagactcattttattta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tacaacagtattattttcaaagtctaattataaagaatggaactagactcattttattta 265
Query: 601 ttgcaattatatttattgatgatttatctataaatcaatgtgatatttcagttcattcta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgcaattatatttattgatgatttatctataaatcaatgtgatatttcagttcattcta 205
Query: 661 ctat 664
||||
Sbjct: 204 ctat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_o20.g1 MSMg01no061_o20.g1 CHROMAT_FILE:
MSMg01no061_o20.g1 PHD_FILE: MSMg01no061_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:02 2005
(564 letters)
>mm_chr2_87680823_87681786
Length = 964
Score = 290 bits (150), Expect = 2e-82
Identities = 219/242 (90%), Gaps = 4/242 (1%)
Strand = Plus / Plus
Query: 325 ataaaaattatttctctgaacttaaatgtaaactcaaatgtatgagtaatttcaaggctt 384
||||||||||||||||| || |||||||| |||||||||||||||||||||||||| |||
Sbjct: 525 ataaaaattatttctctaaatttaaatgtgaactcaaatgtatgagtaatttcaagactt 584
Query: 385 acttaagtccaaagagttaaggt-gtgtcatcatagacaggctttcttaattttaaccct 443
||||||||||||||||||| ||| |||||||| |||| | |||||||||||||||||||
Sbjct: 585 acttaagtccaaagagtta-ggttgtgtcatcgtagatatactttcttaattttaaccct 643
Query: 444 tactaggaacactaaagttattcagctttgaactgattt-tcatgaggagattgaacctc 502
|||||||||||||||||||||||||||||||||||| || | |||| || | || |||||
Sbjct: 644 tactaggaacactaaagttattcagctttgaactgacttgt-atgatgaaagtgcacctc 702
Query: 503 actcagcatacccctacattttcatctatctcctaccagattttcaaagaacaacttgtt 562
| |||||| |||||| ||||||||||||||||||||||||||| |||| ||||| |||||
Sbjct: 703 aatcagcaaacccctgcattttcatctatctcctaccagatttccaaataacaagttgtt 762
Query: 563 tt 564
||
Sbjct: 763 tt 764
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
