Query= MSMg01no063_k22.b1 MSMg01no063_k22.b1 CHROMAT_FILE:
MSMg01no063_k22.b1 PHD_FILE: MSMg01no063_k22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:08 2005
(230 letters)
>mm_chr2_59232000_59232629
Length = 630
Score = 360 bits (186), Expect = e-104
Identities = 220/232 (94%), Gaps = 2/232 (0%)
Strand = Plus / Plus
Query: 1 caatgtatctatctcttggcatagtactttagcagttactgtccccctttcattatggct 60
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 201 caatgtatctatctcttggcatagtactttagcagttactgtaggcatttcattatggct 260
Query: 61 attggtgtcatttcagcagtgtgcatcaagtttagaaacaccatacccacttacatttct 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 attggtgtcatttcagcagtgtgcatcaagtttagaaacaccatacccccttacatttct 320
Query: 121 ttacaactacaccttataaaacatcactgccttaaataatgtttcatatatacatataca 180
||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |
Sbjct: 321 ttacaactacaccttataaaatatcactgccttaaataatgtttcatatatatatatata 380
Query: 181 cacatatatatatatat--tcatatcaaacaggtatggtttttactttaaac 230
| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 tatatatatatatatatattcatatcaaacaggtatggtttttactttaaac 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no063_k22.g1 MSMg01no063_k22.g1 CHROMAT_FILE:
MSMg01no063_k22.g1 PHD_FILE: MSMg01no063_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:08 2005
(285 letters)
>mm_chr2_59393216_59393902
Length = 687
Score = 455 bits (235), Expect = e-132
Identities = 272/287 (94%), Gaps = 8/287 (2%)
Strand = Plus / Minus
Query: 3 ttgatcatctttcctccccagtgcttttccaagaaccatgttctcaccagaaaggatgac 62
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 486 ttgatcatctttcctccccagtgcttttccaagaaccatgttctcaacagaaaggatgac 427
Query: 63 cttcattttaacctctaagaataaataccatggagtgataaataatggcagtgtgaaaat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cttcattttaacctctaagaataaataccatggagtgataaataatggcagtgtgaaaat 367
Query: 123 gaaatgcatcagatattttaaaaaaaccatttttt---acggaaaattaattttcttaat 179
|| ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||
Sbjct: 366 gagatgcatcagatatttaaaaaaaac-atttttttttacggaaaattaattttcttaat 308
Query: 180 ctgtgaaatctcaggtcttcatctggatacttcttcccggaatcaattggacataatttc 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 307 ctgtgaaatctcaggtcttcatctggatacttcttcccggaatcaattggacatgatttc 248
Query: 240 tagctattat--agtgttgtctccaactcatgtctacttgtttataa 284
|||||| | |||||||||||||| || |||||||||||||||||
Sbjct: 247 tagcta--aaggagtgttgtctccaattcgtgtctacttgtttataa 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 687
Length adjustment: 9
Effective length of query: 276
Effective length of database: 678
Effective search space: 187128
Effective search space used: 187128
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
