MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-063M02
Chromosome	2 (Build37)
Map Location	122,546,698 - 122,546,984
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Frmd5, Casc4, Mageb3, Ctdspl2, Eif3s1, 4930424G05Rik, B2m, Trim69, 4933406J08Rik, LOC433468, LOC670832, Sord, Duox2, Duoxa2, Duoxa1, Duox1, Shf, Slc28a2, Bambi-ps1, Rp23-357i14.1, Gatm, Spata5l1, AA467197, Slc30a4
Downstream gene	Pldn, Sqrdl
Link	Open Mouse BAC browser

Click to get alignment info.

name	Frmd5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228564 MGI:2442557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Casc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319996 MGI:2443129
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Mageb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17147 MGI:105109
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ctdspl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329506 MGI:1196405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eif3s1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78655 MGI:1925905
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930424G05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67578 MGI:1914828
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B2m (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12010 MGI:88127
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trim69 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70928 MGI:1918178
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933406J08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74401 MGI:1921651
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein

name	LOC433468 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433468
definition	note : similar to developmental pluripotency associated 4 pseudo : _no_value

name	LOC670832 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670832
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 1046 ESTs, 7 Proteins

name	Sord (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20322 MGI:98266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Duox2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214593 MGI:3036280
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Duoxa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66811 MGI:1914061
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Duoxa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213696 MGI:2384861
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Duox1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99439 MGI:2139422
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 7 Proteins

name	Shf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435684 MGI:3613669
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc28a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269346 MGI:1913105
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bambi-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81913 MGI:1932402
definition	note : BMP and activin membrane-bound inhibitor, pseudogene (Xenopus laevis) pseudo : _no_value

name	Rp23-357i14.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:381417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 36 ESTs, 7 Proteins

name	Gatm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67092 MGI:1914342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spata5l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214616 MGI:3036261
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins

name	AA467197 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433470 MGI:3034182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc30a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22785 MGI:1345282
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pldn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18457 MGI:1927580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sqrdl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59010 MGI:1929899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Frmd5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115298679 GeneID:228564 MGI:2442557
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FERM domain containing 5 transcript_id : NM_172673.3

name	Casc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386893 GeneID:319996 MGI:2443129
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cancer susceptibility candidate 4 transcript_id : NM_177054.4

name	Casc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803515 GeneID:319996 MGI:2443129
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cancer susceptibility candidate 4 transcript_id : NM_199038.2

name	Mageb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543227 GeneID:17147 MGI:105109
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : melanoma antigen, family B, 3 transcript_id : NM_008545.2

name	Ctdspl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803336 GeneID:329506 MGI:1196405
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 transcript_id : NM_212450.2

name	Eif3s1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124244039 GeneID:78655 MGI:1925905
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 3, subunit 1 alpha transcript_id : NM_144545.2

name	4930424G05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114158686 GeneID:67578 MGI:1914828
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930424G05 gene transcript_id : NM_026251.2

name	B2m (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227219 GeneID:12010 MGI:88127
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beta-2 microglobulin transcript_id : NM_009735.3

name	Trim69 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17985998 GeneID:70928 MGI:1918178
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif-containing 69 transcript_id : NM_080510.1

name	4933406J08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94367219 GeneID:74401 MGI:1921651
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein product : RIKEN cDNA 4933406J08 gene transcript_id : XM_130426.4

name	LOC670832 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250090 GeneID:670832
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 1046 ESTs, 7 Proteins product : similar to 40S ribosomal protein S12 transcript_id : XM_001480637.1

name	Sord (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347537 GeneID:20322 MGI:98266
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorbitol dehydrogenase transcript_id : NM_146126.2

name	Duox2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125628639 GeneID:214593 MGI:3036280
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual oxidase 2 transcript_id : NM_177610.2

name	Duoxa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368810 GeneID:66811 MGI:1914061
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual oxidase maturation factor 2 transcript_id : NM_025777.2

name	Duoxa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124430554 GeneID:213696 MGI:2384861
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual oxidase maturation factor 1 transcript_id : NM_145395.2

name	Duox1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250092 GeneID:99439 MGI:2139422
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 7 Proteins product : dual oxidase 1 transcript_id : XM_130483.7

name	Shf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185923 GeneID:435684 MGI:3613669
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Src homology 2 domain containing F transcript_id : NM_001013829.2

name	Slc28a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365483 GeneID:269346 MGI:1913105
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 transcript_id : NM_172980.2

name	Rp23-357i14.1 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367193 GeneID:381417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 36 ESTs, 4 Proteins product : novel protein similar to solute carrier family 28 (sodium-coupled nucleoside transporter) member 2 (Slc28a2), transcript variant 1 transcript_id : XM_355381.5

name	Rp23-357i14.1 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250094 GeneID:381417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 36 ESTs, 6 Proteins product : novel protein similar to solute carrier family 28 (sodium-coupled nucleoside transporter) member 2 (Slc28a2) transcript_id : XM_001480663.1

name	Gatm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354911 GeneID:67092 MGI:1914342
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycine amidinotransferase (L-arginine:glycine amidinotransferase) transcript_id : NM_025961.3

name	Spata5l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249980 GeneID:214616 MGI:3036261
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins product : spermatogenesis associated 5-like 1 transcript_id : XM_001479997.1

name	AA467197 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51921340 GeneID:433470 MGI:3034182
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AA467197 transcript_id : NM_001004174.1

name	Slc30a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52630420 GeneID:22785 MGI:1345282
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 30 (zinc transporter), member 4 transcript_id : NM_011774.2

name	Pldn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110578650 GeneID:18457 MGI:1927580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pallidin transcript_id : NM_019788.3

name	Sqrdl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981548 GeneID:59010 MGI:1929899
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sulfide quinone reductase-like (yeast) transcript_id : NM_021507.4

name	Frmd5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51036627 CCDS:CCDS16649.1 GeneID:228564 MGI:2442557
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008092 - cytoskeletal protein binding [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA] codon_start : 1 product : FERM domain containing 5 protein_id : NP_766261.2

name	Casc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930597 CCDS:CCDS16650.1 GeneID:319996 MGI:2443129
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : cancer susceptibility candidate 4 isoform 1 protein_id : NP_796028.2

name	Casc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930616 GeneID:319996 MGI:2443129
definition	codon_start : 1 exception : unclassified translation discrepancy note : isoform 2 is encoded by transcript variant 2 product : cancer susceptibility candidate 4 isoform 2 protein_id : NP_950239.1

name	Mageb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543228 CCDS:CCDS16651.1 GeneID:17147 MGI:105109
definition	codon_start : 1 note : melanoma antigen family B 3 product : melanoma antigen, family B, 3 protein_id : NP_032571.2

name	Ctdspl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059059 CCDS:CCDS16652.1 GeneID:329506 MGI:1196405
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0016791 - phosphoric monoester hydrolase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : CTD (carboxy-terminal domain RNA polymerase II polypeptide A) small phosphatase like 2 product : CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 protein_id : NP_997615.1

name	Eif3s1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124244040 GeneID:78655 MGI:1925905
definition	GO_function : GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 product : eukaryotic translation initiation factor 3, subunit 1 alpha protein_id : NP_653128.2

name	4930424G05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114158687 CCDS:CCDS16653.1 GeneID:67578 MGI:1914828
definition	codon_start : 1 product : hypothetical protein LOC67578 protein_id : NP_080527.2

name	B2m (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981890 CCDS:CCDS16654.1 GeneID:12010 MGI:88127
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0003823 - antigen binding [Evidence IEA]; GO:0030106 - MHC class I receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0019883 - antigen processing and presentation of endogenous antigen [Evidence IEA]; GO:0019885 - antigen processing and presentation of endogenous peptide antigen via MHC class I [Evidence IEA]; GO:0006968 - cellular defense response [Evidence TAS]; GO:0006952 - defense response [Evidence IEA]; GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : beta 2 microglobulin product : beta-2-microglobulin protein_id : NP_033865.2

name	Trim69 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17985999 CCDS:CCDS16655.1 GeneID:70928 MGI:1918178
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : RFP-like (B30.2) domain protein; ring finger protein 36 product : tripartite motif-containing 69 protein_id : NP_536771.1

name	4933406J08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20911573 GeneID:74401 MGI:1921651
definition	codon_start : 1 product : hypothetical protein LOC74401 protein_id : XP_130426.1

name	LOC670832 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250091 GeneID:670832
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 protein_id : XP_001480687.1

name	Sord (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22128627 CCDS:CCDS16657.1 GeneID:20322 MGI:98266
definition	GO_function : GO:0003939 - L-iditol 2-dehydrogenase activity [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : sorbitol dehydrogenase 1 protein_id : NP_666238.1

name	Duox2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125628640 GeneID:214593 MGI:3036280
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : dual oxidase 2 protein_id : NP_808278.2

name	Duoxa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385246 CCDS:CCDS16660.1 GeneID:66811 MGI:1914061
definition	codon_start : 1 product : Numb-interacting protein 2 protein_id : NP_080053.1

name	Duoxa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124430555 CCDS:CCDS16661.1 GeneID:213696 MGI:2384861
definition	codon_start : 1 product : Numb-interacting protein 1 protein_id : NP_663370.2

name	Duox1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250093 GeneID:99439 MGI:2139422
definition	codon_start : 1 product : dual oxidase 1 protein_id : XP_130483.6

name	Shf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185924 CCDS:CCDS16662.1 GeneID:435684 MGI:3613669
definition	GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : Src homology 2 domain containing F protein_id : NP_001013851.2

name	Slc28a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370488 CCDS:CCDS16663.1 GeneID:269346 MGI:1913105
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0001882 - nucleoside binding [Evidence IEA]; GO:0005415 - nucleoside:sodium symporter activity [Evidence IEA]; GO:0015211 - purine nucleoside transporter activity [Evidence IDA] GO_process : GO:0015860 - purine nucleoside transport [Evidence TAS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : purine-selective Na+ nucleoside cotransporter; solute carrier family 28 (sodium-coupled nucleoside transporter) member 2 product : solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 protein_id : NP_766568.1

name	Rp23-357i14.1 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82886766 GeneID:381417
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_355381.4

name	Rp23-357i14.1 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250095 GeneID:381417
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480713.1

name	Gatm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385454 CCDS:CCDS16665.1 GeneID:67092 MGI:1914342
definition	GO_component : GO:0005758 - mitochondrial intermembrane space [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0015068 - glycine amidinotransferase activity [Evidence IEA] [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006601 - creatine biosynthesis [Evidence ISS] codon_start : 1 product : L-arginine:glycine amidinotransferase protein_id : NP_080237.1

name	Spata5l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249981 GeneID:214616 MGI:3036261
definition	codon_start : 1 product : spermatogenesis associated 5-like 1 protein_id : XP_001480047.1

name	AA467197 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51921341 GeneID:433470 MGI:3034182
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] codon_start : 1 note : normal mucosa of esophagus specific gene 1 product : hypothetical protein LOC433470 protein_id : NP_001004174.1

name	Slc30a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52630421 CCDS:CCDS16667.1 GeneID:22785 MGI:1345282
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008324 - cation transporter activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006829 - zinc ion transport [Evidence IEA] codon_start : 1 note : zinc transporter 4; lethal milk; solute carrier family 30 (zinc transporter) member 4 product : solute carrier family 30 (zinc transporter), member 4 protein_id : NP_035904.2

name	Pldn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790039 CCDS:CCDS16668.1 GeneID:18457 MGI:1927580
definition	GO_component : GO:0005768 - endosome [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006944 - membrane fusion [Evidence IPI]; GO:0006904 - vesicle docking during exocytosis [Evidence TAS]; GO:0006906 - vesicle fusion [Evidence TAS] codon_start : 1 note : syntaxin 13-interacting protein pallid; syntaxin 13 binding protein 1 product : pallidin protein_id : NP_062762.1

name	Sqrdl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981549 CCDS:CCDS16669.1 GeneID:59010 MGI:1929899
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : flavo-binding protein; sulfide dehydrogenase-like product : sulfide quinone reductase-like protein_id : NP_067482.3

clone name	MSMg01-499A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377A14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-436G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487H05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-457M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525I06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-081C09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-082P03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-452P09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-486H21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-435F19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-105N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485M19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-513K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123J20
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-063M02.T7 (MSMg01no063_m02.b1)	MSMg01-063M02.TJ (MSMg01no063_m02.g1)
ACC	AG289411	AG289412
length	874	750
length of high quality (start - end)	---	287 (145 - 431)
definition	CHROMAT_FILE: MSMg01no063_m02.b1 PHD_FILE: MSMg01no063_m02.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:08:15 2005	CHROMAT_FILE: MSMg01no063_m02.g1 PHD_FILE: MSMg01no063_m02.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:08:15 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTT TTTTTTTTTTTTTGCGCNTCCNACCCTCCTTACACCCTTCCGCCTCGCCG CCGCCCTCCCTTCTCCGCCCCGCCCCCAGCCGCAAGAGAAGAGCGGCAGG AGAGGGGAAGAAGGGCATTACTAATATAGTAATTAAAACGGAGAAGAAAG GAGACGGAGCCGGAAGGAGGGGTTGTCGCAGAGGAACGCAAAGGACAAAC GGAACACAAGAGAATATAAAAGACAGAAAAGAGATAAATCATTTTAGTGA AGTCGAGGCGCTAACGGGTGCAATCTCCCCCAACGAACAAGGGTGGAGGG AGGGGGGAGGGGAGGGAGGGGGGGGCGCGGCGTGGGATAGTGTAAGGAAG TGGAAGGTGGCGACGCGGAGAGTACGTGTGAGAAATGAAGCGAAGCAGTG GAGCGCGGATCGCATGGGACAGGGAACACCGACAGGGAAGAACGAGAGGA AAGCAGTGGCGATACTGACTGTCAGTATGTACGAGAGCGGGTTGTGGAGG CAAGTAACGGAGCGGGATGAATAGGGGGAGGAAAAAAAAGGAGGAGGGCA GAAGTGAGAAGCGACCGCATTTTCTGAGAAGAATGGGAAGAGCGGGAGGA CGGGGGGAAAATTAGAGAAGGAGGCGGAAGACGGCGGAATGAGTAACTGG TAGGGTACACTTTTGTCCCGTCTCGCCTAGTCACGCGCAGCCACCCACCG AGCTGTTTACAACACCGCGAGGAGATTATTCGCGCCCAAGCAGAAAGAGT CGCGGCGCCGACCACAACTAAGAGGAGGCCAGAAGGGAAACGATGGGCGA GTGGAGGGGAGGGAAGGGAAAAGA	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTNNNNNNCCCCCCCCCCN CCCTTTTCACCCCTNCTTCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCCCC ATTGGGAGAAGTCTATGTCATCTCCCTCCACCTACGGTGGGAAAGTGTTG AGTTTGTTAGGCTGAGTAAGGGATTATGGCCAGGAACATTGGTCACCTTA GAGCATCCACACTGGAGGGTATGTTCTCAGCAGAGGTGATGACTGCCTGA TAGCTGTGTATTATGTAGTTCTCTCCCTTGACCCTCCCCATCTATATGCT CTGTCCCAACCCCACAGATTCATGTGTTTGAACACCTGGTCCCCAGCTGG TAGCACTGTTTTGGGAAATTACTTAATCTGTGGGAGGTGACGCATGCCTG ATAGGGTACATTGTTAGGGGCGGGTCTTTGAGGGTTAGGATCTGGCCTTA CTTTCTCTTCTGTTTTCTGCTTTCTTCTACATCATCACAGACTTCTAATG CTTCAGAGCCATCCTGCCATGTCTGACCCACCCTGACGGACCAAAACTTC CGAAACCATTAGTTAAATTAAACTTTTTTTCCCCTCTTCTGGTGTGCCTC TTTGTCCCGTGATGACAAAAAACCTATCTGGCCTTGTTGATCCCTAACCA ACCTTACATGAAACTTCCCGCCTGTATCATGTACGGTCTTTCGAGATCTT
quality values	Open. Hide. 7 7 7 7 3 0 3 7 7 9 9 9 9 9 9 9 6 6 6 9 15 24 24 24 9 9 9 9 24 24 47 37 37 24 24 12 8 17 3 0 3 8 8 9 22 23 41 39 24 19 10 10 12 22 8 8 9 19 19 21 10 8 8 8 8 8 3 0 3 8 3 0 3 6 8 13 10 8 8 8 8 8 8 8 8 9 9 10 10 10 9 11 15 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 13 13 10 10 10 10 10 11 10 11 10 10 10 10 10 10 8 8 8 8 8 8 13 11 11 11 10 10 8 8 8 10 10 8 8 8 8 8 8 8 8 10 10 9 10 8 13 9 9 9 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 11 6 6 6 6 8 8 13 10 10 10 9 10 9 8 8 8 8 9 9 13 11 10 8 8 8 10 8 8 10 10 11 11 9 7 7 6 8 8 8 8 10 8 10 8 10 12 11 10 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 6 6 8 8 12 11 11 11 11 11 10 10 10 12 15 13 12 12 12 19 21 16 15 8 8 8 8 11 8 10 13 8 8 6 6 8 8 8 9 10 10 10 11 9 9 9 9 9 9 11 11 11 11 9 9 8 8 8 8 8 8 8 8 8 10 8 8 10 13 11 11 10 10 10 8 8 6 6 8 8 11 13 13 8 8 8 8 8 8 9 8 10 8 9 9 11 12 16 16 11 11 11 11 11 12 16 11 11 11 11 11 10 13 10 10 8 8 8 8 8 10 10 15 12 10 9 8 8 8 8 8 8 8 8 6 6 8 8 10 10 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 12 8 8 8 8 8 8 8 8 10 10 10 10 10 11 13 11 11 11 10 10 6 6 8 8 11 11 11 11 11 11 13 11 11 11 8 10 6 6 8 8 8 8 8 8 10 10 10 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 9 13 9 6 6 10 8 8 8 8 8 8 8 8 8 10 10 9 9 9 8 8 8 8 6 6 10 10 9 10 10 10 9 8 9 10 8 8 8 8 10 8 8 9 9 9 11 12 10 10 8 8 8 8 8 8 8 8 8 6 6 8 8 6 6 8 8 8 8 8 8 8 10 8 7 7 9 11 8 8 6 6 8 8 8 8 8 10 8 8 8 8 8 11 8 8 8 8 8 7 6 6 8 8 9 9 8 8 6 6 8 8 13 16 16 11 8 8 6 6 8 10 9 9 9 11 10 10 10 10 10 10 10 10 8 8 8 8 8 6 6 6 6 8 8 8 8 8 9 10 12 12 12 12 12 11 11 9 8 8 6 6 8 8 8 8 8 10 8 8 11 11 11 10 10 10 13 8 6 6 6 6 11 10 10 10 8 11 10 10 10 10 11 11 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 6 6 8 8 8 8 8 8 8 8 8 9 9 9 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 9 9 9 10 8 8 8 6 6 6 6 8 8 8 8 8 8 7 8 8 8 10 10 8 8 8 8 8 8 6 7 8 10 8 8 8 8 8 8 8 10 10 11 11 14 10 8 8 8 10 10 12 10 10 10 10 9 9 8 8 8 8 8 8 6 6 8 10 8 8 8 8 9 10 10 10 9 11 9 9 13 13 10 12 10 9 8 10 10 10 10 11 11 10 10 10 10 10 8 8 8 8 8 8 8 8 8 11 9 9 9 6 8 6 6 8 8 8 8 8 8 10 10 12 12 12 11 12 11 8 8 6 6 8 8 9 9 9	Open. Hide. 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 3 0 0 0 0 0 0 3 7 7 9 9 9 9 7 7 3 0 3 7 7 9 9 7 7 8 8 8 8 8 8 3 0 3 6 6 7 7 9 13 8 8 8 8 8 10 6 6 6 15 19 27 30 25 37 41 32 31 30 30 27 25 35 40 37 27 21 13 10 10 10 12 12 19 16 17 20 20 33 27 48 48 57 47 50 36 42 37 37 50 50 57 57 41 28 12 15 10 10 12 12 19 24 34 48 48 33 33 37 40 50 43 68 68 68 68 68 68 68 68 57 57 47 47 47 57 48 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 57 57 57 57 68 68 57 57 57 57 44 44 27 23 23 23 32 38 50 50 50 50 57 68 68 57 57 57 57 57 57 57 57 57 54 54 54 57 57 57 57 57 57 57 50 50 50 57 50 57 57 57 57 57 59 57 52 52 52 57 57 57 57 57 57 52 57 57 57 57 57 57 59 57 52 43 57 57 57 57 57 57 52 52 52 57 57 57 57 52 52 52 57 57 57 57 57 57 59 57 57 52 52 52 52 57 52 52 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 57 59 59 57 52 52 57 57 57 59 57 57 52 52 52 52 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 48 48 48 59 59 59 59 59 59 59 59 48 48 48 48 59 59 57 57 54 57 57 57 42 42 37 42 42 57 57 43 57 57 57 57 48 48 57 57 57 48 42 30 30 30 37 37 43 43 36 36 36 40 37 35 35 35 35 32 36 39 42 43 43 43 40 34 23 20 20 32 32 40 48 48 47 48 43 34 33 33 22 25 21 19 18 12 11 12 11 12 12 11 11 12 12 12 11 12 12 18 19 31 30 34 28 23 20 20 28 25 32 37 32 32 36 43 39 39 39 34 37 21 13 8 8 8 11 11 28 34 34 36 39 37 28 28 23 23 23 23 23 23 33 37 39 39 43 36 39 43 30 33 30 26 21 21 28 28 22 23 23 28 33 33 39 36 36 35 37 37 43 43 48 48 48 40 44 28 28 22 30 18 18 11 12 18 24 24 16 10 10 9 10 15 19 24 30 30 26 23 12 21 12 18 18 24 23 18 14 14 14 24 25 35 39 43 39 32 37 23 23 18 12 12 10 10 10 22 18 15 9 13 10 8 8 8 8 10 10 8 8 8 8 8 8 8 8 8 8 10 12 12 10 8 8 8 9 9 8 8 8 8 8 8 8 10 13 8 8 8 8 9 9 11 8 8 8 8 8 15 18 12 10 8 8 8 12 15 15 14 14 17 18 18 12 12 12 11 11 8 8 8 8 8 8 8 8 8 10 12 8 8 8 9 10 12 10 10 10 10 8 8 10 15 12 9 8 8 10 10 10 10 8 10 10 10 10 9 11 15 9 13 13 11 11 11 10 11 11 10 10 9 9 11 11 12 10 8 8 8 6 6 8 8 8 8 8 8 8 9 9 18 10 10 10 10 12 9 9 9 9 9 9 10 10 10 9 9 9 11 10 13 10 10 10 10 10 9 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no063_m02.g1 MSMg01no063_m02.g1 CHROMAT_FILE:
MSMg01no063_m02.g1 PHD_FILE: MSMg01no063_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:15 2005
         (287 letters)



>mm_chr2_122546498_122547184
          Length = 687

 Score =  540 bits (279), Expect = e-158
 Identities = 285/287 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctccccattgggagaagtctatgtcatctccctccacctacggtgggaaagtgttgagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctccccattgggagaagtctatgtcatctccctccacctacggtgggaaagtgttgagtt 260

                                                                       
Query: 61  tgttaggctgagtaagggattatggccaggaacattggtcaccttagagcatccacactg 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttaggctgagtgagggattatggccaggaacattggtcaccttagagcatccacactg 320

                                                                       
Query: 121 gagggtatgttctcagcagaggtgatgactgcctgatagctgtgtattatgtagttctct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 gagggtatgttctcagcagaggtgatgactgcctgatagctgtgtattatggagttctct 380

                                                                       
Query: 181 cccttgaccctccccatctatatgctctgtcccaaccccacagattcatgtgtttgaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccttgaccctccccatctatatgctctgtcccaaccccacagattcatgtgtttgaaca 440

                                                          
Query: 241 cctggtccccagctggtagcactgttttgggaaattacttaatctgt 287
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctggtccccagctggtagcactgttttgggaaattacttaatctgt 487


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space:   188484
Effective search space used:   188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information