Query= MSMg01no063_o18.b1 MSMg01no063_o18.b1 CHROMAT_FILE:
MSMg01no063_o18.b1 PHD_FILE: MSMg01no063_o18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:28 2005
(555 letters)
>mm_chr2_178881158_178882111
Length = 954
Score = 1019 bits (527), Expect = 0.0
Identities = 545/551 (98%), Gaps = 1/551 (0%)
Strand = Plus / Plus
Query: 5 gaattcaggatgatccaccgcaagccagatctttcaggtagacacacagaaactccagta 64
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggatgatccagggcaagccagatctttcaggtagacacacagaaactccagta 264
Query: 65 gattctggcaagttctgcaggaaactgtggctaaaatgtgctttcaatccagatcccaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gattctggcaagttctgcaggaaactgtggctaaaatgtgctttcaatccagatcccaat 324
Query: 125 aacttcatgctctccggtgtgccgttagaacagtcatgttaaacagcacattaaccacag 184
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 aacttcacgctctccggtgtgccgttagaacagtcgtgttaaacagcacattaaccacag 384
Query: 185 agcttgggaaagcaaggaaggtccagatggtgtccttcagacttggggcacttgcggttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 385 agcttgggaaagcaaggaaggtccagatggtgtccttcagacttggggcacttgcggctc 444
Query: 245 tggggctgagcatctgcagatggataccacaagcgtgatagacaagggcactgacctcgc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tggggctgagcatctgcagatggataccacaagcgtgatagacaagggcactgacctcgc 504
Query: 305 tgcccaagaagtgtgatgggacacactttgtgacggtggctccttgcagggagcttgaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgcccaagaagtgtgatgggacacactttgtgacggtggctccttgcagggagcttgaag 564
Query: 365 agccacttgtaccttctccagttaattttcagaagtgggatctgtgcacgacaagatgtg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agccacttgtaccttctccagttaattttcagaagtgggatctgtgcacgacaagatgtg 624
Query: 425 acagctcctaatcctcccaattactctgctcaaacccagagagtcctccactttgatcac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acagctcctaatcctcccaattactctgctcaaacccagagagtcctccactttgatcac 684
Query: 485 acgagcactttgcacggcttcaggaaatgagcctccaaatcccagacatacattgggaaa 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 685 acgagcactttgcacggcttcaggaaatgagcctccaaatcccagacatacattgg-aaa 743
Query: 545 aaaaaaaagag 555
|||||||||||
Sbjct: 744 aaaaaaaagag 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 954
Length adjustment: 10
Effective length of query: 545
Effective length of database: 944
Effective search space: 514480
Effective search space used: 514480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_o18.g1 MSMg01no063_o18.g1 CHROMAT_FILE:
MSMg01no063_o18.g1 PHD_FILE: MSMg01no063_o18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:28 2005
(291 letters)
>mm_chr2_178961133_178961823
Length = 691
Score = 563 bits (291), Expect = e-165
Identities = 291/291 (100%)
Strand = Plus / Minus
Query: 1 tctgacagcagagtgctgggactcaggtgttctactgactggatgcagatcaggagttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tctgacagcagagtgctgggactcaggtgttctactgactggatgcagatcaggagttct 432
Query: 61 gcctcctttccagggaccaggccagggtcatgaatcagtgggcatcccctgaggtaaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gcctcctttccagggaccaggccagggtcatgaatcagtgggcatcccctgaggtaaggt 372
Query: 121 cagtgtcatggggtaagaaaaacatacaagacactttaaaatgttctcaaagcagtgata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cagtgtcatggggtaagaaaaacatacaagacactttaaaatgttctcaaagcagtgata 312
Query: 181 cttgataagaaagttctcaagatggatgaaaaatcggatatgatgcccctaacttactac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cttgataagaaagttctcaagatggatgaaaaatcggatatgatgcccctaacttactac 252
Query: 241 tcagaacatgccagtcctggggcaagccacctcttatggattctgaaagcc 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tcagaacatgccagtcctggggcaagccacctcttatggattctgaaagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
